Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.1e-92 343.2 170 100.0
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 2.3e-56 222.6 178 71.9
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 3.2e-50 202.2 106 91.5
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 1.7e-48 196.4 170 64.1
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 6.8e-45 184.5 106 81.1
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 5.8e-44 181.4 171 60.8
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 9.8e-44 180.6 106 82.1
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 7.0e-42 174.5 106 78.3
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 3.3e-39 165.6 106 74.5
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.2e-33 147.1 108 68.5
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 1.6e-33 146.7 111 64.9
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 1.6e-33 146.7 83 80.7
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 3.0e-32 142.5 103 68.9
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 6.6e-32 141.4 130 54.6
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.3e-31 138.7 113 62.8
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 4.3e-31 138.7 108 63.9
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 4.3e-31 138.7 103 63.1
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 9.5e-31 137.5 108 63.9
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-30 137.1 108 63.0
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.6e-30 136.7 103 67.0
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 3.6e-30 135.6 109 62.4
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 6.2e-30 134.8 108 63.0
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 6.2e-30 134.8 113 58.4
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 2.3e-29 132.9 109 61.5
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.3e-29 132.9 114 60.5
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 4.0e-29 132.1 109 62.4
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 6.8e-29 131.3 108 62.0
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 6.8e-29 131.3 112 58.0
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 1.2e-28 130.6 108 63.9
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.2e-28 130.6 104 60.6
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.6e-28 129.4 110 63.6
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 4.4e-28 128.6 112 61.6
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 5.8e-28 128.3 110 60.9
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 7.6e-28 127.9 112 59.8
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.6e-28 127.9 110 58.2
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 7.6e-28 127.9 107 63.6
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 7.6e-28 127.9 101 62.4
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 9.9e-28 127.5 109 61.5
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 9.9e-28 127.5 111 62.2
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.3e-27 127.1 110 60.0
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.3e-27 127.1 110 60.0
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.2e-27 126.3 110 60.9
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 2.2e-27 126.3 101 57.4
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 2.9e-27 125.9 68 80.9
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.9e-27 125.9 110 57.3
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.9e-27 125.9 110 57.3
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.9e-27 125.9 111 57.7
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 6.4e-27 124.8 103 65.0
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 6.4e-27 124.8 83 71.1
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 1.1e-26 124.0 107 63.6
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.1e-26 124.0 107 63.6
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.4e-26 123.6 107 63.6
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.4e-26 123.6 103 58.3
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.4e-26 123.6 66 83.3
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 1.9e-26 123.2 111 60.4
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 2.4e-26 122.9 111 56.8
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 4.1e-26 122.1 75 72.0
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 4.1e-26 122.1 95 60.0
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 5.4e-26 121.7 55 92.7
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 7.1e-26 121.3 107 62.6
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 7.1e-26 121.3 114 56.1
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 9.2e-26 120.9 103 62.1
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 1.2e-25 120.6 100 61.0
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.6e-25 120.2 158 48.7
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 3.5e-25 119.0 77 68.8
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 6.0e-25 118.2 106 59.4
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 7.8e-25 117.9 111 57.7
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 1.0e-24 117.5 53 92.5
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.3e-24 117.1 77 67.5
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 2.3e-24 116.3 98 60.2
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 2.3e-24 116.3 134 47.8
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.3e-24 116.3 104 54.8
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 3.0e-24 115.9 95 61.1
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 3.9e-24 115.5 112 54.5
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 3.9e-24 115.5 54 92.6
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 5.1e-24 115.2 169 43.2
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 8.6e-24 114.4 96 60.4
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.1e-23 114.0 98 59.2
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.5e-23 113.6 78 62.8
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.9e-23 113.2 98 58.2
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 3.3e-23 112.5 52 90.4
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 4.3e-23 112.1 54 87.0
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 4.3e-23 112.1 54 87.0
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 4.3e-23 112.1 74 68.9
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 5.6e-23 111.7 55 89.1
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 5.6e-23 111.7 54 87.0
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 5.6e-23 111.7 113 52.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 5.6e-23 111.7 113 52.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 7.3e-23 111.3 95 58.9
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 7.3e-23 111.3 95 58.9
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 7.3e-23 111.3 51 90.2
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 9.6e-23 110.9 95 58.9
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 2.1e-22 109.8 107 46.7
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 2.1e-22 109.8 52 86.5
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 4.7e-22 108.6 108 49.1
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.4e-21 107.1 110 50.9
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.4e-21 107.1 96 54.2
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 3.1e-21 105.9 98 53.1
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 3.1e-21 105.9 98 53.1
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 3.1e-21 105.9 98 53.1
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 6.9e-21 104.8 130 49.2
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 1.5e-20 103.6 50 86.0
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 2.0e-20 103.2 97 57.7
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 3.4e-20 102.4 95 54.7
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 5.8e-20 101.7 113 48.7
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 7.6e-20 101.3 55 76.4
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 7.6e-20 101.3 47 83.0
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 3.8e-19 99.0 118 44.1
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 6.4e-19 98.2 51 74.5
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 6.4e-19 98.2 51 74.5
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.4e-18 96.3 52 82.7
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 4.6e-17 92.0 90 45.6
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 7.8e-17 91.3 97 48.5
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 1.7e-16 90.1 62 62.9
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 4.3e-15 85.5 49 65.3
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 9.6e-15 84.3 55 60.0


User provided reference genes

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