Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.1e-203 713.0 354 100.0
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.2e-173 613.2 379 82.8
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 4.9e-162 574.7 356 77.8
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 2.4e-161 572.4 354 79.7
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 4.6e-160 568.2 356 79.2
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 7.0e-153 544.3 358 77.1
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.1e-150 537.0 355 76.3
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.5e-150 536.6 354 75.4
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 4.0e-148 528.5 357 73.9
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.2e-147 526.9 357 73.7
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 7.6e-139 497.7 270 93.0
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.2e-130 469.5 365 65.5
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 6.0e-128 461.5 372 64.8
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 2.8e-125 452.6 358 65.6
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.6e-125 452.2 365 63.3
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 3.6e-125 452.2 367 64.6
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 5.3e-124 448.4 367 63.2
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 6.9e-124 448.0 367 64.3
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.2e-122 443.0 365 61.9
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 4.2e-121 438.7 401 58.4
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 9.3e-121 437.6 353 63.2
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 9.3e-121 437.6 377 63.1
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.6e-120 436.8 385 59.5
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.7e-120 436.0 366 61.5
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 6.0e-120 434.9 371 62.8
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 1.0e-119 434.1 371 61.7
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 1.9e-118 429.9 405 56.8
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 7.4e-118 427.9 365 60.8
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 4.8e-117 425.2 443 53.0
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 8.1e-117 424.5 363 60.3
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.4e-116 423.7 397 58.4
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 9.0e-116 421.0 371 60.1
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 2.6e-115 419.5 367 60.2
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 5.8e-115 418.3 366 59.3
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 7.6e-115 417.9 414 55.6
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.3e-114 417.2 349 61.6
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 1.4e-113 413.7 353 62.6
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 4.2e-113 412.1 408 55.4
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 4.2e-113 412.1 374 60.7
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 7.1e-113 411.4 278 71.2
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 1.6e-112 410.2 369 58.3
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 3.5e-112 409.1 387 57.6
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.9e-110 403.3 262 74.0
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.5e-110 402.9 370 59.2
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 3.3e-110 402.5 369 57.5
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 5.6e-110 401.7 373 58.4
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 7.4e-110 401.4 398 54.3
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.3e-109 400.6 316 64.9
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.1e-108 397.5 445 50.6
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.4e-108 397.1 416 52.6
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.8e-108 396.7 367 58.6
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 9.0e-108 394.4 371 58.2
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 3.4e-107 392.5 261 72.0
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.3e-106 390.6 368 56.5
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 3.8e-106 389.0 369 57.7
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 4.9e-106 388.7 299 64.5
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 8.4e-106 387.9 252 73.4
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 5.5e-105 385.2 443 49.0
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 2.1e-104 383.3 345 59.1
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 2.1e-104 383.3 290 66.9
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.7e-104 382.9 373 57.1
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 3.5e-104 382.5 371 57.1
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 6.0e-104 381.7 348 56.6
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 7.9e-104 381.3 339 58.7
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 5.1e-103 378.6 280 66.1
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.1e-102 377.5 352 56.5
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 5.7e-102 375.2 405 53.1
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 5.7e-102 375.2 405 53.1
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 9.7e-102 374.4 397 52.4
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 9.7e-102 374.4 355 56.9
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 2.2e-101 373.2 397 52.4
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.8e-101 372.9 309 62.5
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 4.8e-101 372.1 354 54.8
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.4e-100 370.5 410 52.7
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 3.1e-100 369.4 340 57.4
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.2e-99 367.5 379 55.7
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 1.0e-95 354.4 365 51.8
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.3e-93 347.4 348 54.3
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.1e-92 342.4 394 50.3
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 8.5e-90 334.7 352 53.7
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 6.1e-88 328.6 376 51.3
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.4e-87 327.4 380 47.4
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 6.7e-87 325.1 381 47.2
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 2.6e-86 323.2 406 48.3
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 5.7e-86 322.0 256 62.5
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.6e-80 303.9 280 58.2
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.0e-75 287.0 299 49.5
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 5.0e-74 282.3 172 76.2
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 4.7e-72 275.8 338 50.3
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 2.3e-71 273.5 182 72.5
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 4.8e-69 265.8 259 53.3
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 7.0e-68 261.9 288 51.4
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 9.1e-68 261.5 268 54.5
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 7.7e-67 258.5 278 53.6
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 5.5e-65 252.3 364 42.9
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 1.4e-60 237.7 221 52.5
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.6e-56 224.2 346 44.5
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 8.9e-55 218.4 209 52.2
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 3.1e-52 209.9 152 65.1
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 9.5e-49 198.4 178 59.0
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.6e-48 197.6 250 42.4
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 8.0e-48 195.3 347 39.2
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 4.0e-47 193.0 113 77.0
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 1.7e-42 177.6 87 93.1
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 5.2e-39 166.0 91 84.6
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.7e-37 159.8 225 47.1
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 8.1e-32 142.1 123 60.2
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.3e-29 134.8 84 70.2
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 2.4e-28 130.6 282 32.3
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.2e-27 128.3 239 37.2
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 3.9e-26 123.2 233 39.1
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.9e-25 120.9 134 45.5
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 2.7e-19 100.5 147 44.9
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.0e-18 98.6 84 53.6
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 1.8e-15 87.8 60 61.7
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 1.4e-12 78.2 47 68.1
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.3e-10 71.6 131 38.2
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 9.0e-07 58.9 180 31.7


User provided reference genes

Program Settings