Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 6.6e-50 200.3 93 100.0
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 3.3e-25 118.2 55 96.4
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 9.5e-25 116.7 55 94.5
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 1.2e-24 116.3 55 94.5
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 2.8e-24 115.2 55 92.7
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 2.8e-24 115.2 55 92.7
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 3.6e-24 114.8 59 84.7
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 8.1e-24 113.6 55 90.9
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 1.1e-23 113.2 55 89.1
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 1.1e-23 113.2 55 90.9
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 4.0e-23 111.3 55 87.3
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 4.0e-23 111.3 55 87.3
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 4.0e-23 111.3 55 89.1
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 4.0e-23 111.3 55 87.3
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 4.0e-23 111.3 55 87.3
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 4.0e-23 111.3 55 87.3
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 4.0e-23 111.3 55 87.3
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 5.2e-23 110.9 55 87.3
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 6.8e-23 110.5 55 87.3
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 6.8e-23 110.5 55 87.3
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 6.8e-23 110.5 55 87.3
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 6.8e-23 110.5 55 87.3
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 6.8e-23 110.5 55 87.3
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 8.9e-23 110.2 55 87.3
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 1.2e-22 109.8 55 85.5
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 1.2e-22 109.8 55 85.5
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 1.5e-22 109.4 55 87.3
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 1.5e-22 109.4 55 87.3
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.6e-22 108.6 55 85.5
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.6e-22 108.6 55 85.5
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 2.6e-22 108.6 55 85.5
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 2.6e-22 108.6 55 85.5
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 4.4e-22 107.8 55 83.6
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 4.4e-22 107.8 55 85.5
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 5.8e-22 107.5 55 85.5
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 5.8e-22 107.5 55 81.8
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 7.6e-22 107.1 55 85.5
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 7.6e-22 107.1 55 83.6
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 7.6e-22 107.1 55 83.6
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 9.9e-22 106.7 80 65.0
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 9.9e-22 106.7 55 85.5
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 9.9e-22 106.7 55 85.5
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 9.9e-22 106.7 55 81.8
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 1.3e-21 106.3 55 81.8
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 1.3e-21 106.3 55 83.6
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 1.7e-21 105.9 55 83.6
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.7e-21 105.9 55 83.6
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 1.7e-21 105.9 55 83.6
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 1.7e-21 105.9 55 83.6
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 1.7e-21 105.9 55 83.6
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 2.2e-21 105.5 55 83.6
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 2.9e-21 105.1 55 80.0
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.9e-21 105.1 55 80.0
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.9e-21 105.1 55 80.0
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 2.9e-21 105.1 55 80.0
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 2.9e-21 105.1 55 78.2
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 2.9e-21 105.1 55 80.0
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 3.7e-21 104.8 55 80.0
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 3.7e-21 104.8 55 81.8
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 4.9e-21 104.4 55 83.6
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 6.4e-21 104.0 55 83.6
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 8.4e-21 103.6 55 81.8
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 8.4e-21 103.6 55 80.0
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 8.4e-21 103.6 55 83.6
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 1.1e-20 103.2 55 80.0
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 1.1e-20 103.2 55 81.8
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 1.9e-20 102.4 55 80.0
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 2.4e-20 102.1 55 80.0
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.2e-20 101.7 54 81.5
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.2e-20 101.7 54 81.5
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 3.2e-20 101.7 54 81.5
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 3.2e-20 101.7 55 78.2
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 5.4e-20 100.9 55 80.0
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 7.1e-20 100.5 52 82.7
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 9.2e-20 100.1 54 79.6
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 9.2e-20 100.1 54 79.6
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.2e-19 99.8 52 82.7
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 1.2e-19 99.8 52 82.7
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.6e-19 99.4 52 80.8
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 3.5e-19 98.2 55 74.5
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 7.8e-19 97.1 56 71.4
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 1.3e-18 96.3 54 74.1
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 5.1e-18 94.4 55 70.9
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 9.6e-17 90.1 52 71.2
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 2.8e-16 88.6 54 68.5
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 1.1e-15 86.7 43 86.0
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 6.4e-13 77.4 37 91.9
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.9e-12 75.9 54 57.4
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.9e-12 75.9 54 57.4
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.4e-12 75.5 69 46.4
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.4e-12 75.5 55 54.5
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 1.7e-10 69.3 54 55.6
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 6.6e-10 67.4 67 43.3
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 7.3e-09 63.9 37 75.7
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.1e-07 58.5 53 47.2
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 2.0e-06 55.8 38 57.9
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.6e-06 55.5 51 47.1
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 4.4e-06 54.7 56 39.3
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 5.8e-06 54.3 62 38.7


User provided reference genes

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