Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G132100 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 4.3e-50 201.1 103 100.0
VMungo1215G1007 Vigna mungo HOM05D004361 ORTHO05D004706 1.8e-32 142.5 89 83.1
Phvul.002G049100 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 4.0e-32 141.4 89 82.0
Glyma.11G003100 Glycine max HOM05D004361 ORTHO05D004706 4.4e-23 111.3 88 68.2
Glyma.01G240500 Glycine max HOM05D004361 ORTHO05D004706 7.1e-21 104.0 89 65.2
Lj1g0002529 Lotus japonicus HOM05D004361 ORTHO05D004706 6.0e-20 100.9 86 66.3
VMungo0720G0988 Vigna mungo HOM05D004361 ORTHO05D004706 6.2e-17 90.9 88 60.2
Glyma.10G252400 Glycine max HOM05D004361 ORTHO05D004706 1.1e-16 90.1 90 58.9
arahy.Tifrunner.gnm1.ann1.Y6FWJK Arachis hypogaea HOM05D004361 ORTHO05D004706 1.8e-16 89.4 86 58.1
Glyma.20G141000 Glycine max HOM05D004361 ORTHO05D004706 2.4e-16 89.0 90 58.9
arahy.Tifrunner.gnm1.ann1.QUZ1HU Arachis hypogaea HOM05D004361 ORTHO05D004706 4.0e-16 88.2 86 58.1
Manes.17G034800 Manihot esculenta HOM05D004361 ORTHO05D004706 5.3e-16 87.8 89 53.9
Dinv17836 Davidia involucrata HOM05D004361 ORTHO05D004706 6.9e-16 87.4 89 52.8
Phvul.007G051800 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 6.9e-16 87.4 88 58.0
Actinidia05535 Actinidia chinensis HOM05D004361 ORTHO05D004706 9.0e-16 87.0 89 50.6
Lalb_Chr02g0144581 Lupinus albus HOM05D004361 ORTHO05D004706 1.5e-15 86.3 84 59.5
Actinidia26950 Actinidia chinensis HOM05D004361 ORTHO05D004706 3.4e-15 85.1 88 55.7
Gohir.D06G213000 Gossypium hirsutum HOM05D004361 ORTHO05D004706 2.2e-14 82.4 87 55.2
Gorai.010G253100 Gossypium raimondii HOM05D004361 ORTHO05D004706 2.2e-14 82.4 87 55.2
Manes.16G012800 Manihot esculenta HOM05D004361 ORTHO05D004706 3.8e-14 81.6 88 50.0
Potri.011G026900 Populus trichocarpa HOM05D004361 ORTHO05D004706 4.9e-14 81.3 99 51.5
Sabra04G0012700 Salix brachista HOM05D004361 ORTHO05D004706 6.4e-14 80.9 87 56.3
Gohir.A06G208100 Gossypium hirsutum HOM05D004361 ORTHO05D004706 8.4e-14 80.5 87 54.0
Lalb_Chr21g0307851 Lupinus albus HOM05D004361 ORTHO05D004706 1.1e-13 80.1 89 53.9
Duzib192G0487 Durio zibethinus HOM05D004361 ORTHO05D004706 1.4e-13 79.7 86 52.3
CANSAT56G2280 Cannabis sativa HOM05D004361 ORTHO05D004706 1.9e-13 79.3 86 50.0
Lalb_Chr16g0376351 Lupinus albus HOM05D004361 ORTHO05D004706 1.9e-13 79.3 86 53.5
Sabra11G0017100 Salix brachista HOM05D004361 ORTHO05D004706 1.9e-13 79.3 99 51.5
Haze_06732 Corylus avellana HOM05D004361 ORTHO05D004706 2.4e-13 79.0 86 55.8
MSTRG.15964 Avicennia marina HOM05D004361 ORTHO05D004706 3.2e-13 78.6 89 47.2
Medtr5g005560 Medicago truncatula HOM05D004361 ORTHO05D004706 3.2e-13 78.6 89 57.3
Cfa000279 Carpinus fangiana HOM05D004361 ORTHO05D004706 5.4e-13 77.8 86 55.8
Haze_06736 Corylus avellana HOM05D004361 ORTHO05D004706 5.4e-13 77.8 86 55.8
QL05p075222 Quercus lobata HOM05D004361 ORTHO05D004706 5.4e-13 77.8 86 55.8
Prupe.4G026600 Prunus persica HOM05D004361 ORTHO05D004706 9.3e-13 77.0 76 56.6
CSS0034427 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 2.1e-12 75.9 81 49.4
MD05G1340800 Malus domestica HOM05D004361 ORTHO05D004706 2.1e-12 75.9 86 54.7
MD10G1314300 Malus domestica HOM05D004361 ORTHO05D004706 2.7e-12 75.5 87 54.0
Thecc.06G213600 Theobroma cacao HOM05D004361 ORTHO05D004706 3.5e-12 75.1 86 47.7
Psat4g215200 Pisum sativum HOM05D004361 ORTHO05D004706 4.6e-12 74.7 87 55.2
Actinidia14236 Actinidia chinensis HOM05D004361 ORTHO05D004706 6.0e-12 74.3 88 43.2
arahy.Tifrunner.gnm1.ann1.F31F99 Arachis hypogaea HOM05D004361 ORTHO05D004706 6.0e-12 74.3 91 53.8
Duzib235G0682 Durio zibethinus HOM05D004361 ORTHO05D004706 6.0e-12 74.3 86 47.7
Lj5g0000713 Lotus japonicus HOM05D004361 ORTHO05D004706 6.0e-12 74.3 89 55.1
Cpa.g.sc198.2 Carica papaya HOM05D004361 ORTHO05D004706 7.8e-12 73.9 82 51.2
COL.COLO4_31721 Corchorus olitorius HOM05D004361 ORTHO05D004706 7.8e-12 73.9 87 51.7
FvH4_3g02690 Fragaria vesca HOM05D004361 ORTHO05D004706 7.8e-12 73.9 86 53.5
FAN21G0156 Fragaria x ananassa HOM05D004361 ORTHO05D004706 7.8e-12 73.9 86 53.5
RcHm_v2.0_Chr5g0004031 Rosa chinensis HOM05D004361 ORTHO05D004706 1.0e-11 73.6 86 53.5
CiPaw.10G068100 Carya illinoinensis HOM05D004361 ORTHO05D004706 5.1e-11 71.2 73 60.3
FAN25G3407 Fragaria x ananassa HOM05D004361 ORTHO05D004706 5.1e-11 71.2 86 52.3
CiPaw.09G086700 Carya illinoinensis HOM05D004361 ORTHO05D004706 8.7e-11 70.5 86 51.2
TPR.G8297 Trifolium pratense HOM05D004361 ORTHO05D004706 8.7e-11 70.5 78 57.7
Eucgr.D00816 Eucalyptus grandis HOM05D004361 ORTHO05D004706 2.5e-10 68.9 87 44.8
Actinidia11836 Actinidia chinensis HOM05D004361 ORTHO05D004706 3.3e-10 68.6 87 43.7
Cc00_g17930 Coffea canephora HOM05D004361 ORTHO05D004706 3.3e-10 68.6 86 50.0
CSS0045436 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 5.6e-10 67.8 90 46.7
Gohir.D06G151500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 9.6e-10 67.0 86 45.3
Gorai.010G176700 Gossypium raimondii HOM05D004361 ORTHO05D004706 9.6e-10 67.0 86 45.3
Peaxi162Scf00678g00313 Petunia axillaris HOM05D004361 ORTHO05D004706 2.1e-09 65.9 90 45.6
CsaV3_1G011080 Cucumis sativus L. HOM05D004361 ORTHO05D004706 3.6e-09 65.1 93 50.5
Gohir.A06G145600 Gossypium hirsutum HOM05D004361 ORTHO05D004706 3.6e-09 65.1 81 46.9
TWI38G1626 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 3.6e-09 65.1 87 48.3
Migut.M01277 Erythranthe guttata HOM05D004361 ORTHO05D004706 4.8e-09 64.7 89 46.1
PGR004G2667 Punica granatum HOM05D004361 ORTHO05D004706 6.2e-09 64.3 79 48.1
CAN.G569.44 Capsicum annuum HOM05D004361 ORTHO05D004706 8.1e-09 63.9 86 45.3
Medtr1g105555 Medicago truncatula HOM05D004361 ORTHO05D004706 8.1e-09 63.9 89 49.4
MSTRG.7243 Avicennia marina HOM05D004361 ORTHO05D004706 1.1e-08 63.5 89 41.6
ClCG03G005000 Citrullus lanatus HOM05D004361 ORTHO05D004706 1.1e-08 63.5 93 50.5
Psat6g210400 Pisum sativum HOM05D004361 ORTHO05D004706 1.4e-08 63.2 92 47.8
Rhsim02G0112300 Rhododendron simsii HOM05D004361 ORTHO05D004706 1.4e-08 63.2 92 46.7
TAR629G1557 Trochodendron aralioides HOM05D004361 ORTHO05D004706 1.8e-08 62.8 91 46.2
Oeu026856.1 Olea europaea HOM05D004361 ORTHO05D004706 2.4e-08 62.4 87 43.7
Gohir.D10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.0e-08 61.6 81 42.0
Gorai.011G017100 Gossypium raimondii HOM05D004361 ORTHO05D004706 4.0e-08 61.6 81 42.0
Potri.004G023000 Populus trichocarpa HOM05D004361 ORTHO05D004706 5.3e-08 61.2 87 48.3
Hma1.2p1_0091F.1_g046140 Hydrangea macrophylla HOM05D004361 ORTHO05D004706 6.9e-08 60.8 89 41.6
vmacro03710 Vaccinium macrocarpon HOM05D004361 ORTHO05D004706 6.9e-08 60.8 85 43.5
MELO3C002485.2 Cucumis melo HOM05D004361 ORTHO05D004706 9.0e-08 60.5 93 48.4
DCAR_008122 Daucus carota HOM05D004361 ORTHO05D004706 9.0e-08 60.5 88 45.5
Sc05g0008860 Simmondsia chinensis HOM05D004361 ORTHO05D004706 1.5e-07 59.7 80 48.8
TWI38G0935 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 1.5e-07 59.7 78 48.7
Nitab4.5_0006795g0040 Nicotiana tabacum HOM05D004361 ORTHO05D004706 2.0e-07 59.3 95 42.1
TAR626G1160 Trochodendron aralioides HOM05D004361 ORTHO05D004706 2.6e-07 58.9 60 58.3
DCAR_004190 Daucus carota HOM05D004361 ORTHO05D004706 3.4e-07 58.5 83 47.0
Sed0011498 Sechium edule HOM05D004361 ORTHO05D004706 7.6e-07 57.4 64 56.2
vmacro15833 Vaccinium macrocarpon HOM05D004361 ORTHO05D004706 1.7e-06 56.2 71 49.3
Sed0010653 Sechium edule HOM05D004361 ORTHO05D004706 3.8e-06 55.1 88 45.5
GSVIVG01012625001 Vitis vinifera HOM05D004361 ORTHO05D004706 3.8e-06 55.1 95 38.9
A03p52710 Brassica napus HOM05D004361 ORTHO05D004706 4.9e-06 54.7 103 39.8
Gohir.A10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.9e-06 54.7 81 43.2
BcaNung00863 Brassica carinata HOM05D004361 ORTHO05D004706 6.4e-06 54.3 105 40.0
C07p51140 Brassica napus HOM05D004361 ORTHO05D004706 6.4e-06 54.3 105 40.0
BolC7t45614H Brassica oleracea HOM05D004361 ORTHO05D004706 6.4e-06 54.3 105 40.0
BraA03t14345Z Brassica rapa HOM05D004361 ORTHO05D004706 6.4e-06 54.3 103 39.8
AUR62022017 Chenopodium quinoa HOM05D004361 ORTHO05D004706 8.4e-06 53.9 76 44.7


User provided reference genes

Program Settings