Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G126900 Phaseolus vulgaris HOM05D002732 ORTHO05D002955 9.7e-33 142.9 73 100.0
arahy.Tifrunner.gnm1.ann1.22PLV7 Arachis hypogaea HOM05D002732 ORTHO05D002955 4.7e-11 70.9 53 64.2
arahy.Tifrunner.gnm1.ann1.Y16IUA Arachis hypogaea HOM05D002732 ORTHO05D002955 4.7e-11 70.9 53 64.2
Glyma.13G238900 Glycine max HOM05D002732 ORTHO05D002955 4.7e-11 70.9 69 56.5
Glyma.15G074400 Glycine max HOM05D002732 ORTHO05D002955 6.1e-11 70.5 53 64.2
Phvul.006G185200 Phaseolus vulgaris HOM05D002732 ORTHO05D002955 1.4e-10 69.3 53 67.9
VMungo0540G2358 Vigna mungo HOM05D002732 ORTHO05D002955 3.1e-10 68.2 69 56.5
VMungo0464G0049 Vigna mungo HOM05D002732 ORTHO05D002955 4.0e-10 67.8 62 61.3
TPR.G16521 Trifolium pratense HOM05D002732 ORTHO05D002955 8.9e-10 66.6 53 62.3
Ca_00337_v3 Cicer arietinum L. HOM05D002732 ORTHO05D002955 1.2e-09 66.2 53 60.4
Lj6g0011192 Lotus japonicus HOM05D002732 ORTHO05D002955 1.2e-09 66.2 62 56.5
Medtr2g013680 Medicago truncatula HOM05D002732 ORTHO05D002955 1.2e-09 66.2 53 60.4
Psat1g204800 Pisum sativum HOM05D002732 ORTHO05D002955 1.2e-09 66.2 53 60.4
Lalb_Chr18g0059621 Lupinus albus HOM05D002732 ORTHO05D002955 1.5e-09 65.9 51 64.7
QL05p040585 Quercus lobata HOM05D002732 ORTHO05D002955 3.4e-09 64.7 50 60.0
Lalb_Chr20g0121881 Lupinus albus HOM05D002732 ORTHO05D002955 1.3e-08 62.8 51 58.8
GSVIVG01005213001 Vitis vinifera HOM05D002732 ORTHO05D002955 2.2e-08 62.0 51 54.9
Haze_06449 Corylus avellana HOM05D002732 ORTHO05D002955 2.9e-08 61.6 51 58.8
Prupe.4G047900 Prunus persica HOM05D002732 ORTHO05D002955 2.9e-08 61.6 50 56.0
Rhsim13G0178300 Rhododendron simsii HOM05D002732 ORTHO05D002955 2.9e-08 61.6 51 58.8
MD10G1293900 Malus domestica HOM05D002732 ORTHO05D002955 3.7e-08 61.2 51 54.9
Cfa000466 Carpinus fangiana HOM05D002732 ORTHO05D002955 4.9e-08 60.8 51 56.9
vmacro03870 Vaccinium macrocarpon HOM05D002732 ORTHO05D002955 6.4e-08 60.5 51 56.9
Dinv07562 Davidia involucrata HOM05D002732 ORTHO05D002955 8.3e-08 60.1 51 54.9
Thecc.06G186700 Theobroma cacao HOM05D002732 ORTHO05D002955 8.3e-08 60.1 51 54.9
TWI63G0998 Tripterygium wilfordii HOM05D002732 ORTHO05D002955 1.4e-07 59.3 51 54.9
Potri.011G052900 Populus trichocarpa HOM05D002732 ORTHO05D002955 1.9e-07 58.9 59 49.2
TWI38G1002 Tripterygium wilfordii HOM05D002732 ORTHO05D002955 1.9e-07 58.9 51 54.9
COL.COLO4_31466 Corchorus olitorius HOM05D002732 ORTHO05D002955 2.4e-07 58.5 51 52.9
Duzib160G0083 Durio zibethinus HOM05D002732 ORTHO05D002955 3.2e-07 58.2 51 52.9
Gohir.A06G127000 Gossypium hirsutum HOM05D002732 ORTHO05D002955 3.2e-07 58.2 46 58.7
Gohir.D05G337900 Gossypium hirsutum HOM05D002732 ORTHO05D002955 3.2e-07 58.2 46 58.7
Gohir.D06G131900 Gossypium hirsutum HOM05D002732 ORTHO05D002955 3.2e-07 58.2 46 58.7
Gorai.010G153700 Gossypium raimondii HOM05D002732 ORTHO05D002955 3.2e-07 58.2 46 58.7
CANSAT35G1366 Cannabis sativa HOM05D002732 ORTHO05D002955 5.4e-07 57.4 62 46.8
Duzib235G0658 Durio zibethinus HOM05D002732 ORTHO05D002955 7.0e-07 57.0 51 52.9
Lj1P843T26 Lonicera japonica HOM05D002732 ORTHO05D002955 7.0e-07 57.0 51 47.1
CSS0048477 Camellia sinensis var. sinensis HOM05D002732 ORTHO05D002955 9.2e-07 56.6 51 49.0
ClCG01G023020 Citrullus lanatus HOM05D002732 ORTHO05D002955 9.2e-07 56.6 67 44.8
FvH4_3g09111 Fragaria vesca HOM05D002732 ORTHO05D002955 9.2e-07 56.6 50 52.0
FvH4_3g09112 Fragaria vesca HOM05D002732 ORTHO05D002955 9.2e-07 56.6 50 52.0
FAN11G0076 Fragaria x ananassa HOM05D002732 ORTHO05D002955 9.2e-07 56.6 50 52.0
FAN16G2125 Fragaria x ananassa HOM05D002732 ORTHO05D002955 9.2e-07 56.6 50 52.0
Manes.17G046000 Manihot esculenta HOM05D002732 ORTHO05D002955 9.2e-07 56.6 51 51.0
MSTRG.12909 Avicennia marina HOM05D002732 ORTHO05D002955 1.2e-06 56.2 50 50.0
Ciclev10017087m.g Citrus clementina HOM05D002732 ORTHO05D002955 1.2e-06 56.2 51 52.9
MELO3C007281.2 Cucumis melo HOM05D002732 ORTHO05D002955 1.2e-06 56.2 67 43.3
Gohir.D10G026700 Gossypium hirsutum HOM05D002732 ORTHO05D002955 1.2e-06 56.2 50 52.0
Gorai.011G028000 Gossypium raimondii HOM05D002732 ORTHO05D002955 1.2e-06 56.2 50 52.0
Manes.16G028200 Manihot esculenta HOM05D002732 ORTHO05D002955 1.2e-06 56.2 51 51.0
Oeu024911.1 Olea europaea HOM05D002732 ORTHO05D002955 1.2e-06 56.2 51 51.0
CsaV3_6G050150 Cucumis sativus L. HOM05D002732 ORTHO05D002955 1.6e-06 55.8 67 43.3
FAN25G1852 Fragaria x ananassa HOM05D002732 ORTHO05D002955 1.6e-06 55.8 50 52.0
MELO3C019413.2 Cucumis melo HOM05D002732 ORTHO05D002955 2.0e-06 55.5 51 52.9
Lsat_1_v5_gn_9_98100 Lactuca sativa HOM05D002732 ORTHO05D002955 2.0e-06 55.5 58 44.8
Ciclev10009828m.g Citrus clementina HOM05D002732 ORTHO05D002955 2.7e-06 55.1 51 49.0
DCAR_020987 Daucus carota HOM05D002732 ORTHO05D002955 2.7e-06 55.1 51 47.1
HanXRQChr12g0364251 Helianthus annuus HOM05D002732 ORTHO05D002955 2.7e-06 55.1 58 44.8
Actinidia09686 Actinidia chinensis HOM05D002732 ORTHO05D002955 3.5e-06 54.7 51 45.1
Cfa020586 Carpinus fangiana HOM05D002732 ORTHO05D002955 3.5e-06 54.7 51 51.0
Haze_09426 Corylus avellana HOM05D002732 ORTHO05D002955 3.5e-06 54.7 51 51.0
Oeu016898.1 Olea europaea HOM05D002732 ORTHO05D002955 3.5e-06 54.7 51 49.0
SalBow7G0138 Salvia bowleyana HOM05D002732 ORTHO05D002955 3.5e-06 54.7 51 49.0
Aqoxy1G02410 Aquilegia oxysepala HOM05D002732 ORTHO05D002955 4.6e-06 54.3 46 54.3
CsaV3_3G019410 Cucumis sativus L. HOM05D002732 ORTHO05D002955 4.6e-06 54.3 48 54.2
Oeu043912.1 Olea europaea HOM05D002732 ORTHO05D002955 4.6e-06 54.3 51 51.0
RcHm_v2.0_Chr5g0008521 Rosa chinensis HOM05D002732 ORTHO05D002955 4.6e-06 54.3 50 50.0
Sed0003245 Sechium edule HOM05D002732 ORTHO05D002955 4.6e-06 54.3 67 43.3
Sed0025037 Sechium edule HOM05D002732 ORTHO05D002955 4.6e-06 54.3 51 51.0
Gohir.D05G164300 Gossypium hirsutum HOM05D002732 ORTHO05D002955 7.8e-06 53.5 50 50.0
Gorai.009G169500 Gossypium raimondii HOM05D002732 ORTHO05D002955 7.8e-06 53.5 50 50.0


User provided reference genes

Program Settings