Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 6.5e-67 257.3 134 100.0
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 1.9e-50 202.6 134 82.1
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 4.5e-44 181.4 134 72.4
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 5.7e-39 164.5 104 78.8
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 2.2e-38 162.5 134 67.2
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 2.4e-37 159.1 134 62.7
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 3.2e-37 158.7 134 62.7
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 2.1e-33 146.0 104 74.0
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.2e-28 130.2 134 52.2
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 1.3e-27 126.7 132 53.8
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 2.5e-26 122.5 129 56.6
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 5.6e-26 121.3 93 62.4
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 5.6e-26 121.3 93 62.4
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 7.3e-26 120.9 86 68.6
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 9.5e-26 120.6 130 53.1
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 9.5e-26 120.6 136 50.7
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 9.5e-26 120.6 121 52.1
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 1.6e-25 119.8 125 51.2
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 3.6e-25 118.6 126 56.3
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 3.6e-25 118.6 126 51.6
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 6.2e-25 117.9 88 62.5
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 6.2e-25 117.9 133 48.1
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 8.1e-25 117.5 105 62.9
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 1.1e-24 117.1 126 50.8
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 1.8e-24 116.3 126 50.8
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 1.8e-24 116.3 118 51.7
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 2.3e-24 115.9 90 61.1
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 4.0e-24 115.2 126 50.0
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 6.8e-24 114.4 133 48.9
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 6.8e-24 114.4 111 53.2
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 8.9e-24 114.0 133 49.6
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 1.2e-23 113.6 129 49.6
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 1.5e-23 113.2 122 48.4
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 2.0e-23 112.8 137 46.0
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 3.4e-23 112.1 138 46.4
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 3.4e-23 112.1 117 48.7
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 9.8e-23 110.5 93 59.1
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 1.3e-22 110.2 94 57.4
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 2.9e-22 109.0 86 58.1
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.1e-21 107.1 86 57.0
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 1.1e-21 107.1 86 57.0
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.4e-21 106.7 89 59.6
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 1.9e-21 106.3 105 60.0
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 4.1e-21 105.1 124 49.2
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 7.1e-21 104.4 95 56.8
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 2.1e-20 102.8 94 51.1
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 3.5e-20 102.1 90 54.4
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 3.5e-20 102.1 86 57.0
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 2.3e-19 99.4 103 50.5
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 3.0e-19 99.0 81 59.3
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 3.0e-19 99.0 81 59.3
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 3.9e-19 98.6 72 63.9
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 5.1e-19 98.2 65 69.2
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 1.1e-18 97.1 126 42.9
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 1.1e-18 97.1 101 42.6
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 1.5e-18 96.7 72 68.1
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 1.5e-18 96.7 131 44.3
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 4.3e-18 95.1 57 75.4
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 1.2e-17 93.6 75 57.3
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 1.6e-17 93.2 81 56.8
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 2.1e-17 92.8 85 55.3
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 3.6e-17 92.0 83 50.6
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 3.6e-17 92.0 56 71.4
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 4.7e-17 91.7 105 45.7
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 8.1e-17 90.9 95 46.3
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 1.4e-16 90.1 57 70.2
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 2.3e-16 89.4 105 44.8
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 3.1e-16 89.0 66 59.1
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 4.0e-16 88.6 59 64.4
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 7.6e-15 84.3 115 44.3
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 7.6e-15 84.3 64 64.1
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 7.6e-15 84.3 109 45.0
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 4.9e-14 81.6 49 77.6
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 8.4e-14 80.9 67 50.7
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 1.9e-13 79.7 67 52.2
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 3.5e-12 75.5 78 43.6
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 6.0e-12 74.7 93 44.1
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 1.0e-11 73.9 36 91.7
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 3.9e-11 72.0 66 50.0
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 9.6e-10 67.4 40 72.5
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 9.6e-10 67.4 40 72.5
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 3.6e-09 65.5 128 33.6
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 1.4e-08 63.5 50 54.0
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 2.4e-08 62.8 90 41.1
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 3.1e-08 62.4 127 33.1
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 4.0e-08 62.0 155 32.3
CsaV3_5G039910 Cucumis sativus L. HOM05D007718 ORTHO05D009752 2.0e-07 59.7 58 48.3


User provided reference genes

Program Settings