Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 9.2e-284 979.5 499 100.0
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 2.6e-262 908.3 499 93.6
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 2.1e-235 818.9 515 82.3
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 1.2e-214 750.0 515 75.3
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 3.7e-208 728.4 515 74.0
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 1.7e-205 719.5 515 72.8
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 2.5e-204 715.7 461 81.8
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 6.3e-200 701.0 516 71.3
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 5.2e-178 628.2 453 72.0
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 2.9e-144 516.2 521 54.3
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 4.3e-140 502.3 518 54.4
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 4.1e-138 495.7 519 52.6
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 5.8e-137 491.9 450 58.2
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 2.2e-136 490.0 518 51.5
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 1.1e-135 487.6 497 54.7
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 3.2e-135 486.1 467 55.0
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 4.2e-135 485.7 518 52.5
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 1.0e-133 481.1 516 52.1
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 5.1e-133 478.8 521 53.6
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 6.7e-133 478.4 514 51.8
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 1.1e-132 477.6 507 51.9
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 7.4e-132 474.9 518 50.6
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 1.6e-131 473.8 518 49.8
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.8e-131 473.0 516 52.1
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 2.8e-131 473.0 519 51.4
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 8.2e-131 471.5 519 52.8
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 3.1e-130 469.5 516 50.8
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 2.6e-129 466.5 527 49.5
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 8.5e-128 461.5 477 53.2
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 1.1e-127 461.1 521 50.7
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 1.4e-127 460.7 514 49.6
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 9.4e-127 458.0 520 48.1
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.8e-125 453.8 569 47.6
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 1.1e-124 451.1 458 53.5
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 7.4e-124 448.4 469 51.2
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 1.7e-123 447.2 596 47.1
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.5e-121 440.7 522 47.9
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 3.4e-121 439.5 439 52.6
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 3.8e-120 436.0 519 48.4
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 5.0e-120 435.6 523 47.8
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 8.5e-120 434.9 479 49.3
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 9.4e-119 431.4 482 47.9
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 9.4e-119 431.4 576 45.8
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 9.4e-119 431.4 521 48.8
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 2.1e-118 430.3 408 58.3
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.1e-118 428.7 468 49.1
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 6.1e-118 428.7 520 46.0
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 1.0e-117 427.9 520 47.3
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 1.1e-116 424.5 459 49.9
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.4e-116 421.8 441 50.6
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.7e-115 420.6 441 50.1
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 2.8e-115 419.9 451 49.0
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 1.2e-113 414.5 443 49.2
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 4.5e-113 412.5 487 47.4
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 1.7e-112 410.6 480 47.3
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 2.9e-112 409.8 444 49.5
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 2.9e-112 409.8 490 46.7
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 9.4e-111 404.8 520 46.2
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 1.2e-110 404.4 449 49.9
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 6.1e-110 402.1 469 47.3
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 8.0e-110 401.7 461 47.3
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 3.7e-107 392.9 449 48.8
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 2.4e-106 390.2 451 48.6
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 3.1e-106 389.8 451 48.8
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 3.1e-106 389.8 445 47.9
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 1.2e-105 387.9 518 44.8
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 2.0e-105 387.1 449 48.6
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 4.5e-105 386.0 425 48.7
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 1.3e-104 384.4 450 48.2
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 1.3e-104 384.4 518 43.6
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 2.2e-104 383.6 450 47.3
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 2.9e-104 383.3 450 48.2
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 2.9e-104 383.3 442 48.2
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 6.5e-104 382.1 447 47.4
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 8.5e-104 381.7 450 48.2
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 1.1e-103 381.3 463 47.9
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 1.5e-103 380.9 526 42.6
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 1.5e-103 380.9 445 47.6
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 3.2e-103 379.8 460 46.7
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 1.4e-101 374.4 515 42.9
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 2.3e-101 373.6 511 43.2
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 3.0e-101 373.2 510 43.7
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 3.0e-101 373.2 510 43.7
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 5.2e-101 372.5 456 46.7
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 5.2e-101 372.5 526 40.9
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 8.8e-101 371.7 568 40.1
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 2.0e-100 370.5 446 47.1
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 3.7e-99 366.3 449 43.9
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 8.3e-99 365.2 443 47.2
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 2.4e-98 363.6 458 45.2
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 6.5e-96 355.5 520 38.8
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 6.1e-94 349.0 330 54.8
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 1.4e-85 321.2 451 43.7
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 3.0e-85 320.1 266 65.0
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 4.4e-84 316.2 381 44.4
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 4.4e-84 316.2 307 53.7
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 4.9e-83 312.8 367 46.6
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 8.3e-83 312.0 443 40.2
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 1.0e-80 305.1 417 42.2
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 3.9e-80 303.1 306 56.5
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 4.4e-76 289.7 192 77.6
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 5.0e-72 276.2 399 40.4
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 7.3e-71 272.3 443 37.5
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 2.3e-69 267.3 209 65.1
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 3.7e-59 233.4 142 81.7
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 9.6e-55 218.8 440 34.3
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 3.6e-54 216.9 328 39.0
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 4.7e-54 216.5 485 31.5
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 4.4e-52 209.9 307 40.7
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.7e-51 208.0 307 41.0
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 3.8e-51 206.8 449 34.5
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 2.8e-46 190.7 303 38.0
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 2.4e-45 187.6 464 31.9
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.1e-42 178.7 262 43.1
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 1.9e-42 177.9 237 43.0
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 6.0e-41 172.9 436 30.5
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 1.6e-33 148.3 141 52.5
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.1e-33 147.9 125 61.6
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 2.6e-28 131.0 119 57.1
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.5e-23 114.4 136 43.4
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 3.9e-16 90.5 75 56.0
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 4.1e-13 80.5 194 31.4
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.2e-12 79.0 98 37.8
Cpa.g.sc8.168 Carica papaya HOM05D006020 ORTHO05D007665 3.8e-11 73.9 83 49.4
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.8e-11 73.9 116 33.6
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 2.3e-08 64.7 86 41.9
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 1.5e-07 62.0 73 42.5
BcaB07g30044 Brassica carinata HOM05D006020 ORTHO05D007665 7.4e-07 59.7 57 52.6


User provided reference genes

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