Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G119300 Phaseolus vulgaris HOM05D017754 ORTHO05D004331 1.3e-23 112.5 66 100.0
VMungo1383G0344 Vigna mungo HOM05D017754 ORTHO05D004331 6.3e-23 110.2 66 98.5
Glyma.18G183451 Glycine max HOM05D017754 ORTHO05D004331 2.9e-20 101.3 66 92.4
Glyma.07G133800 Glycine max HOM05D017754 ORTHO05D004331 2.5e-19 98.2 66 90.9
Lalb_Chr03g0042351 Lupinus albus HOM05D004372 ORTHO05D004331 3.0e-17 91.3 62 82.3
Ca_25907_v3 Cicer arietinum L. HOM05D017754 ORTHO05D004331 9.8e-16 86.3 63 87.3
Medtr7g062230 Medicago truncatula HOM05D017754 ORTHO05D004331 1.1e-14 82.8 63 84.1
MELO3C009251.2 Cucumis melo HOM05D004372 ORTHO05D004331 3.3e-11 71.2 64 68.8
Psat3g139320 Pisum sativum HOM05D017754 ORTHO05D004331 7.3e-11 70.1 60 76.7
ClCG10G021220 Citrullus lanatus HOM05D004372 ORTHO05D004331 3.6e-10 67.8 64 46.9
CsaV3_3G034820 Cucumis sativus L. HOM05D004372 ORTHO05D004331 4.7e-10 67.4 64 57.8
Potri.010G201900 Populus trichocarpa HOM05D004372 ORTHO05D004331 2.3e-09 65.1 67 53.7
Potri.008G057600 Populus trichocarpa HOM05D004372 ORTHO05D004331 6.8e-09 63.5 67 52.2
CANSAT11G2039 Cannabis sativa HOM05D004372 ORTHO05D004331 2.0e-08 62.0 66 50.0
BraA02t04711Z Brassica rapa HOM05D004372 ORTHO05D004331 2.6e-08 61.6 66 43.9
BolC2t06039H Brassica oleracea HOM05D004372 ORTHO05D004331 4.4e-08 60.8 61 44.3
BcaNung06028 Brassica carinata HOM05D004372 ORTHO05D004331 5.8e-08 60.5 61 44.3
C02p00390 Brassica napus HOM05D004372 ORTHO05D004331 5.8e-08 60.5 61 44.3
COL.COLO4_14778 Corchorus olitorius HOM05D004372 ORTHO05D004331 7.5e-08 60.1 63 55.6
Carub.0006s0106 Capsella rubella HOM05D004372 ORTHO05D004331 1.7e-07 58.9 63 44.4
FAN02G2532 Fragaria x ananassa HOM05D004372 ORTHO05D004331 2.2e-07 58.5 67 41.8
FAN05G2794 Fragaria x ananassa HOM05D004372 ORTHO05D004331 2.9e-07 58.2 63 38.1
FAN09G4335 Fragaria x ananassa HOM05D004372 ORTHO05D004331 2.9e-07 58.2 63 38.1
Thecc.05G037100 Theobroma cacao HOM05D004372 ORTHO05D004331 3.7e-07 57.8 63 61.9
Sed0010480 Sechium edule HOM05D004372 ORTHO05D004331 4.9e-07 57.4 67 52.2
FvH4_6g13440 Fragaria vesca HOM05D004372 ORTHO05D004331 6.4e-07 57.0 63 36.5
FAN14G0518 Fragaria x ananassa HOM05D004372 ORTHO05D004331 6.4e-07 57.0 63 36.5
Prupe.6G257600 Prunus persica HOM05D004372 ORTHO05D004331 6.4e-07 57.0 63 41.3
AT5G02220 Arabidopsis thaliana HOM05D004372 ORTHO05D004331 8.3e-07 56.6 63 57.1
CiPaw.09G194900 Carya illinoinensis HOM05D004372 ORTHO05D004331 8.3e-07 56.6 53 64.2
Haze_17088 Corylus avellana HOM05D004372 ORTHO05D004331 1.1e-06 56.2 66 40.9
Ah.16g102460 Amaranthus hybridus HOM05D004372 ORTHO05D004331 1.4e-06 55.8 56 42.9
Thhalv10015202m.g Eutrema salsugineum HOM05D004372 ORTHO05D004331 1.4e-06 55.8 65 61.5
RcHm_v2.0_Chr3g0466321 Rosa chinensis HOM05D004372 ORTHO05D004331 1.4e-06 55.8 63 38.1
Manes.07G117700 Manihot esculenta HOM05D004372 ORTHO05D004331 1.9e-06 55.5 69 43.5
Sp6g40230 Schrenkiella parvula HOM05D004372 ORTHO05D004331 1.9e-06 55.5 63 57.1
CiPaw.01G289300 Carya illinoinensis HOM05D004372 ORTHO05D004331 2.4e-06 55.1 63 41.3
Sopen05g031570 Solanum pennellii HOM05D004372 ORTHO05D004331 2.4e-06 55.1 67 61.2
A10p33400 Brassica napus HOM05D004372 ORTHO05D004331 3.2e-06 54.7 63 39.7
C09p74310 Brassica napus HOM05D004372 ORTHO05D004331 3.2e-06 54.7 63 39.7
BolC9t60164H Brassica oleracea HOM05D004372 ORTHO05D004331 3.2e-06 54.7 63 39.7
BraA10t45371Z Brassica rapa HOM05D004372 ORTHO05D004331 3.2e-06 54.7 63 52.4
TAR636G3128 Trochodendron aralioides HOM05D004372 ORTHO05D004331 3.2e-06 54.7 63 39.7
TAR633G2336 Trochodendron aralioides HOM05D004372 ORTHO05D004331 4.1e-06 54.3 63 39.7
AL6G11450 Arabidopsis lyrata HOM05D004372 ORTHO05D004331 5.4e-06 53.9 63 55.6
Cfa017356 Carpinus fangiana HOM05D004372 ORTHO05D004331 5.4e-06 53.9 56 46.4
Haze_20817 Corylus avellana HOM05D004372 ORTHO05D004331 5.4e-06 53.9 56 48.2
Eucgr.J01238 Eucalyptus grandis HOM05D004372 ORTHO05D004331 5.4e-06 53.9 63 42.9
QL01p030934 Quercus lobata HOM05D004372 ORTHO05D004331 5.4e-06 53.9 58 39.7
Atru.chr8.1996 Acer truncatum HOM05D004372 ORTHO05D004331 7.0e-06 53.5 60 63.3
Manes.02G130300 Manihot esculenta HOM05D004372 ORTHO05D004331 7.0e-06 53.5 63 42.9
Duzib106G0317 Durio zibethinus HOM05D004372 ORTHO05D004331 9.2e-06 53.1 63 60.3
Gorai.012G104900 Gossypium raimondii HOM05D004372 ORTHO05D004331 9.2e-06 53.1 63 42.9


User provided reference genes

Program Settings