Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G119100 Phaseolus vulgaris HOM05D007762 ORTHO05D008066 1.1e-130 469.9 227 100.0
Glyma.07G134000 Glycine max HOM05D007762 ORTHO05D008066 3.5e-97 358.6 227 75.3
Glyma.18G183600 Glycine max HOM05D007762 ORTHO05D008066 1.0e-96 357.1 227 74.4
Lalb_Chr19g0125241 Lupinus albus HOM05D007762 ORTHO05D008066 1.1e-69 267.3 237 56.5
Lj3g0025123 Lotus japonicus HOM05D007762 ORTHO05D008066 1.4e-61 240.4 237 54.0
Psat3g137360 Pisum sativum HOM05D007762 ORTHO05D008066 1.7e-59 233.4 238 53.8
arahy.Tifrunner.gnm1.ann1.LX2K9J Arachis hypogaea HOM05D007762 ORTHO05D008066 9.7e-55 217.6 237 52.3
TPR.G1723 Trifolium pratense HOM05D007762 ORTHO05D008066 1.5e-52 210.3 239 52.7
Medtr7g062260 Medicago truncatula HOM05D007762 ORTHO05D008066 2.1e-49 199.9 233 49.8
Phvul.010G014900 Phaseolus vulgaris HOM05D007762 ORTHO05D008066 2.8e-46 189.5 253 46.6
arahy.Tifrunner.gnm1.ann1.NCI3TY Arachis hypogaea HOM05D007762 ORTHO05D008066 5.0e-43 178.7 212 48.1
Cfa017354 Carpinus fangiana HOM05D007762 ORTHO05D008066 6.3e-38 161.8 256 41.4
TAR633G0209 Trochodendron aralioides HOM05D007762 ORTHO05D008066 1.7e-35 153.7 265 41.5
QL07p048844 Quercus lobata HOM05D007762 ORTHO05D008066 1.9e-34 150.2 255 38.8
Dinv35582 Davidia involucrata HOM05D007762 ORTHO05D008066 4.2e-34 149.1 265 39.6
GSVIVG01034144001 Vitis vinifera HOM05D007762 ORTHO05D008066 1.2e-33 147.5 256 39.5
CiPaw.10G146800 Carya illinoinensis HOM05D007762 ORTHO05D008066 2.1e-33 146.7 239 41.8
Prupe.6G257800 Prunus persica HOM05D007762 ORTHO05D008066 4.0e-32 142.5 249 41.4
CiPaw.09G195100 Carya illinoinensis HOM05D007762 ORTHO05D008066 3.4e-31 139.4 238 39.5
Manes.09G092000 Manihot esculenta HOM05D007762 ORTHO05D008066 7.5e-31 138.3 233 41.6
Dinv37157 Davidia involucrata HOM05D007762 ORTHO05D008066 9.8e-31 137.9 262 37.0
RcHm_v2.0_Chr3g0466291 Rosa chinensis HOM05D007762 ORTHO05D008066 1.7e-30 137.1 262 38.2
FAN05G0447 Fragaria x ananassa HOM05D007762 ORTHO05D008066 2.2e-30 136.7 259 38.6
CANSAT11G0018 Cannabis sativa HOM05D007762 ORTHO05D008066 8.3e-30 134.8 256 41.4
FAN02G3004 Fragaria x ananassa HOM05D007762 ORTHO05D008066 1.1e-29 134.4 253 39.1
FvH4_6g13420 Fragaria vesca HOM05D007762 ORTHO05D008066 1.8e-29 133.7 259 38.2
FAN14G2701 Fragaria x ananassa HOM05D007762 ORTHO05D008066 2.4e-29 133.3 259 38.2
Gorai.001G249600 Gossypium raimondii HOM05D007762 ORTHO05D008066 3.1e-29 132.9 252 38.1
Actinidia11265 Actinidia chinensis HOM05D007762 ORTHO05D008066 5.4e-29 132.1 266 37.6
Potri.006G087300 Populus trichocarpa HOM05D007762 ORTHO05D008066 9.1e-29 131.3 264 35.6
Thecc.05G036900 Theobroma cacao HOM05D007762 ORTHO05D008066 9.1e-29 131.3 252 38.9
TWI74G1309 Tripterygium wilfordii HOM05D007762 ORTHO05D008066 9.1e-29 131.3 264 37.1
Sed0022945 Sechium edule HOM05D007762 ORTHO05D008066 1.6e-28 130.6 248 37.5
Gohir.A13G092305 Gossypium hirsutum HOM05D007762 ORTHO05D008066 2.0e-28 130.2 237 38.4
Gohir.A13G092310 Gossypium hirsutum HOM05D007762 ORTHO05D008066 2.0e-28 130.2 237 38.4
FAN09G1623 Fragaria x ananassa HOM05D007762 ORTHO05D008066 2.7e-28 129.8 259 37.8
Sabra06G0066600 Salix brachista HOM05D007762 ORTHO05D003096 4.5e-28 129.0 264 37.1
Gohir.D13G098400 Gossypium hirsutum HOM05D007762 ORTHO05D008066 5.9e-28 128.6 244 40.2
CsaV3_3G034800 Cucumis sativus L. HOM05D007762 ORTHO05D008066 1.3e-27 127.5 258 33.7
MD12G1144400 Malus domestica HOM05D007762 ORTHO05D008066 8.5e-27 124.8 250 36.4
ClCG10G021240 Citrullus lanatus HOM05D007762 ORTHO05D008066 1.1e-26 124.4 261 35.2
Eucgr.K03113 Eucalyptus grandis HOM05D007762 ORTHO05D008066 1.5e-26 124.0 263 35.0
Duzib106G0002 Durio zibethinus HOM05D007762 ORTHO05D008066 1.9e-26 123.6 256 36.7
MD04G1131300 Malus domestica HOM05D007762 ORTHO05D008066 6.1e-25 118.6 220 37.7
Atru.chr8.1998 Acer truncatum HOM05D007762 ORTHO05D008066 8.0e-25 118.2 264 35.2
Oeu023077.1 Olea europaea HOM05D007762 ORTHO05D008066 6.8e-24 115.2 261 35.2
Hma1.2p1_1889F.1_g306660 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 8.8e-24 114.8 266 36.1
Hma1.2p1_2197F.1_g316916 Hydrangea macrophylla HOM05D007762 ORTHO05D008066 8.8e-24 114.8 266 36.1
vmacro20167 Vaccinium macrocarpon HOM05D007762 ORTHO05D008066 2.0e-23 113.6 262 35.1
Nitab4.5_0008097g0020 Nicotiana tabacum HOM05D007762 ORTHO05D008066 3.4e-23 112.8 260 33.8
Cc10_g11770 Coffea canephora HOM05D007762 ORTHO05D008066 3.7e-22 109.4 233 35.2
Eucgr.A01283 Eucalyptus grandis HOM05D007762 ORTHO05D008066 4.9e-22 109.0 260 33.8
Nitab4.5_0000527g0210 Nicotiana tabacum HOM05D007762 ORTHO05D008066 2.4e-21 106.7 261 33.7
COL.COLO4_14776 Corchorus olitorius HOM05D007762 ORTHO05D008066 1.2e-20 104.4 252 34.1
PGR004G1606 Punica granatum HOM05D007762 ORTHO05D008066 3.5e-20 102.8 267 32.2
PGR031G1528 Punica granatum HOM05D007762 ORTHO05D008066 4.5e-20 102.4 254 34.6
Oeu001858.1 Olea europaea HOM05D007762 ORTHO05D008066 2.9e-19 99.8 236 33.5
Peaxi162Scf00330g00715 Petunia axillaris HOM05D007762 ORTHO05D008066 2.9e-19 99.8 246 33.3
Sopen10g035940 Solanum pennellii HOM05D007762 ORTHO05D008066 5.0e-19 99.0 235 35.3
Solyc10g086560.3 Solanum lycopersicum HOM05D007762 ORTHO05D008066 1.5e-18 97.4 250 31.2
Cc06_g02460 Coffea canephora HOM05D007762 ORTHO05D008066 1.9e-18 97.1 264 32.6
Ciclev10013354m.g Citrus clementina HOM05D007762 ORTHO05D008066 2.5e-18 96.7 254 31.5
Lsat_1_v5_gn_9_33361 Lactuca sativa HOM05D007762 ORTHO05D008066 2.5e-18 96.7 245 33.9
MSTRG.26781 Avicennia marina HOM05D007762 ORTHO05D008066 5.6e-18 95.5 257 31.9
MBI05_g29690_MAGBIO Magnolia biondii HOM05D007762 ORTHO05D008066 1.6e-17 94.0 244 32.0
CAN.G92.14 Capsicum annuum HOM05D007762 ORTHO05D008066 2.8e-17 93.2 239 33.9
Rhsim05G0194300 Rhododendron simsii HOM05D007762 ORTHO05D008066 1.8e-16 90.5 266 30.5
MELO3C009249.2 Cucumis melo HOM05D007762 ORTHO05D008066 6.8e-16 88.6 234 29.5
Aqoxy1G00900 Aquilegia oxysepala HOM05D007762 ORTHO05D008066 2.0e-15 87.0 267 31.5
Nn2g11166 Nelumbo nucifera HOM05D007762 ORTHO05D008066 2.6e-15 86.7 254 28.7
Potri.016G100100 Populus trichocarpa HOM05D007762 ORTHO05D008066 7.5e-15 85.1 241 29.5
FAN28G1746 Fragaria x ananassa HOM05D007762 ORTHO05D008066 9.8e-15 84.7 207 34.8
THA.LOC104806558 Tarenaya hassleriana HOM05D005320 ORTHO05D008066 1.7e-14 84.0 230 35.7
PSO339G2571 Papaver somniferum HOM05D007762 ORTHO05D008066 4.9e-14 82.4 228 30.7
Migut.L01955 Erythranthe guttata HOM05D007762 ORTHO05D008066 1.1e-13 81.3 225 33.8
DCAR_024059 Daucus carota HOM05D007762 ORTHO05D008066 5.4e-13 79.0 238 30.3
THA.LOC104805538 Tarenaya hassleriana HOM05D007762 ORTHO05D008066 1.2e-12 77.8 224 33.5
Duzib093G0438 Durio zibethinus HOM05D007762 ORTHO05D008066 2.0e-12 77.0 220 32.7
MSTRG.5650 Avicennia marina HOM05D007762 ORTHO05D008066 1.3e-11 74.3 233 29.6
Peaxi162Scf00165g00078 Petunia axillaris HOM05D007762 ORTHO05D008066 1.3e-11 74.3 258 29.8
PGSC0003DMG402019151 Solanum tuberosum HOM05D007762 ORTHO05D008066 5.0e-11 72.4 231 29.9
EL10As1g23088 Beta vulgaris HOM05D021339 ORTHO05D008066 1.6e-09 67.4 154 33.8
Sc22g0004450 Simmondsia chinensis HOM05D007762 ORTHO05D008066 2.1e-09 67.0 239 28.5
Hund10692 Selenicereus undatus HOM05D021339 ORTHO05D008066 2.8e-09 66.6 241 31.1
Aa31LG1G22530 Aethionema arabicum HOM05D012592 ORTHO05D008066 6.2e-09 65.5 251 32.7
Aa31sc70G60 Aethionema arabicum HOM05D005320 ORTHO05D008066 1.4e-08 64.3 204 28.9
Migut.J00315 Erythranthe guttata HOM05D007762 ORTHO05D008066 1.8e-08 63.9 208 27.9
Manes.09G092300 Manihot esculenta HOM05D007762 ORTHO05D008066 3.1e-08 63.2 107 37.4
A05p08290 Brassica napus HOM05D005320 ORTHO05D008066 5.2e-08 62.4 212 29.2
C04p10260 Brassica napus HOM05D005320 ORTHO05D008066 5.8e-07 58.9 212 28.3
BolC4t22624H Brassica oleracea HOM05D005320 ORTHO05D008066 7.5e-07 58.5 212 26.9
BcaB02g09262 Brassica carinata HOM05D005320 ORTHO05D008066 9.8e-07 58.2 240 27.1
AL4G34600 Arabidopsis lyrata HOM05D005320 ORTHO05D008066 1.3e-06 57.8 148 33.1
CDE02G1216 Ceratophyllum demersum HOM05D007762 ORTHO05D008066 1.7e-06 57.4 208 28.8
AL6G11430 Arabidopsis lyrata HOM05D012592 ORTHO05D008066 2.2e-06 57.0 227 31.3
CARHR131870 Cardamine hirsuta HOM05D005320 ORTHO05D008066 2.9e-06 56.6 132 34.1
BcaC02g11890 Brassica carinata HOM05D005320 ORTHO05D008066 3.7e-06 56.2 154 28.6
Carub.0004s1962 Capsella rubella HOM05D005320 ORTHO05D008066 3.7e-06 56.2 145 33.1
Thhalv10017273m.g Eutrema salsugineum HOM05D005320 ORTHO05D008066 3.7e-06 56.2 134 36.6
A04p28870 Brassica napus HOM05D005320 ORTHO05D007922 4.9e-06 55.8 137 38.0
BraA04t18361Z Brassica rapa HOM05D005320 ORTHO05D008066 4.9e-06 55.8 137 38.0
BcaB06g29018 Brassica carinata HOM05D005320 ORTHO05D008066 6.4e-06 55.5 144 33.3
BcaC02g07500 Brassica carinata HOM05D005320 ORTHO05D008066 8.3e-06 55.1 217 28.1
A10p33410 Brassica napus HOM05D012592 ORTHO05D008066 8.3e-06 55.1 80 46.2
C04p66130 Brassica napus HOM05D005320 ORTHO05D007922 8.3e-06 55.1 217 28.1
BolC4t28116H Brassica oleracea HOM05D005320 ORTHO05D007922 8.3e-06 55.1 137 33.6
BraA10t45372Z Brassica rapa HOM05D012592 ORTHO05D008066 8.3e-06 55.1 80 46.2


User provided reference genes

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