Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 8.3e-188 660.2 334 100.0
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 1.3e-119 433.7 315 74.9
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 4.2e-107 392.1 241 80.9
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 6.3e-95 351.7 319 58.3
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 2.2e-92 343.2 327 59.0
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 5.0e-92 342.0 325 56.6
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 6.8e-89 331.6 303 58.4
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 1.0e-84 317.8 320 53.8
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 1.6e-82 310.5 314 53.8
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 6.8e-81 305.1 319 51.1
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 1.6e-74 283.9 325 49.5
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 2.6e-72 276.6 263 53.2
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 2.4e-62 243.4 293 45.4
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 9.9e-56 221.5 320 42.8
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 2.9e-55 219.9 264 45.8
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 4.6e-53 212.6 323 42.4
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 7.8e-53 211.8 326 40.5
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 1.7e-52 210.7 269 42.0
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 3.0e-52 209.9 323 41.2
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 5.1e-52 209.1 326 40.8
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 6.6e-52 208.8 323 41.8
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 6.6e-52 208.8 322 40.4
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 2.5e-51 206.8 324 40.4
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 4.3e-51 206.1 270 43.7
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 1.2e-50 204.5 326 39.9
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 1.2e-50 204.5 321 40.5
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 4.7e-50 202.6 269 41.6
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 8.1e-50 201.8 321 40.2
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 5.2e-49 199.1 320 40.3
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 6.9e-49 198.7 321 40.8
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 8.9e-49 198.4 323 42.4
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 8.9e-49 198.4 320 40.3
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 1.2e-48 198.0 321 38.0
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 2.6e-48 196.8 269 42.0
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 5.8e-48 195.7 269 41.3
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 5.8e-48 195.7 329 38.9
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 1.7e-47 194.1 319 36.4
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 3.8e-47 193.0 293 40.6
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 4.9e-47 192.6 321 40.2
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 1.1e-46 191.4 271 41.7
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.9e-46 190.7 324 39.5
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 2.4e-46 190.3 324 36.4
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 2.4e-46 190.3 323 39.9
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 3.2e-46 189.9 324 38.0
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 3.2e-46 189.9 321 39.6
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 4.2e-46 189.5 321 37.4
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 5.4e-46 189.1 263 41.8
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 7.1e-46 188.7 323 38.1
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 7.1e-46 188.7 269 39.4
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 1.6e-45 187.6 319 36.7
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 2.1e-45 187.2 326 35.3
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 4.6e-45 186.0 328 38.1
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 7.8e-45 185.3 337 34.7
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 1.7e-44 184.1 316 37.3
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 3.9e-44 183.0 324 37.0
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 1.5e-43 181.0 320 39.1
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 1.5e-43 181.0 269 39.0
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 1.9e-43 180.6 270 39.3
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 4.8e-42 176.0 285 38.6
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 3.1e-41 173.3 324 38.3
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 9.0e-41 171.8 270 37.4
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 1.5e-40 171.0 314 36.0
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 2.6e-40 170.2 321 36.1
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 3.4e-40 169.9 269 40.1
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 7.6e-40 168.7 301 34.9
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 9.9e-40 168.3 322 36.6
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 9.9e-40 168.3 269 39.0
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 3.8e-39 166.4 358 33.8
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 1.1e-38 164.9 268 37.3
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 1.1e-38 164.9 271 38.0
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 1.4e-38 164.5 273 37.4
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 5.4e-38 162.5 267 35.2
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 5.4e-38 162.5 275 37.8
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 7.1e-38 162.2 321 35.5
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 1.2e-37 161.4 319 33.5
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 2.7e-37 160.2 324 32.7
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 3.5e-37 159.8 268 36.9
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 7.9e-37 158.7 268 35.8
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 1.0e-36 158.3 268 36.9
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 1.0e-36 158.3 319 33.9
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 1.3e-36 157.9 266 36.1
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 3.0e-36 156.8 269 36.4
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 3.9e-36 156.4 312 34.0
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 3.3e-35 153.3 266 36.1
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 5.6e-35 152.5 345 32.2
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 7.4e-35 152.1 270 34.8
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 7.4e-35 152.1 266 34.2
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 7.4e-35 152.1 266 34.2
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 4.8e-34 149.4 268 36.6
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 2.4e-33 147.1 266 36.5
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 5.3e-33 146.0 260 35.0
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 5.3e-33 146.0 321 31.5
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 9.9e-32 141.7 203 40.4
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 6.4e-31 139.0 193 43.0
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 8.4e-31 138.7 299 32.4
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 2.9e-23 113.6 253 32.4
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 2.5e-22 110.5 176 36.4
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 3.2e-22 110.2 216 34.7
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 2.7e-21 107.1 223 35.0
Glyma.07G135200 Glycine max HOM05D006045 ORTHO05D007678 5.1e-20 102.8 66 77.3
Glyma.10G191650 Glycine max HOM05D006045 ORTHO05D007678 6.7e-20 102.4 90 64.4
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 8.2e-18 95.5 173 34.7
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 1.0e-15 88.6 119 41.2
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 4.6e-13 79.7 77 48.1
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 3.9e-12 76.6 229 29.3
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 1.1e-11 75.1 226 29.2
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 1.9e-11 74.3 235 28.5
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 1.6e-10 71.2 236 28.8
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 3.7e-10 70.1 91 44.0
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 1.1e-09 68.6 197 29.4
Medtr4g078800 Medicago truncatula HOM05D006045 ORTHO05D007678 5.3e-09 66.2 160 27.5
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 2.6e-08 63.9 99 38.4
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 5.0e-07 59.7 95 34.7
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.1e-06 58.5 76 40.8
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.4e-06 58.2 127 29.9
Glyma.07G135250 Glycine max HOM05D006045 ORTHO05D007678 4.2e-06 56.6 47 61.7
Medtr2g093870 Medicago truncatula HOM05D006045 ORTHO05D007678 4.2e-06 56.6 94 39.4


User provided reference genes

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