Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 1.1e-240 836.3 428 100.0
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 9.2e-224 780.0 429 91.4
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 1.3e-204 716.5 430 82.6
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 5.1e-198 694.5 428 80.4
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 5.1e-198 694.5 429 81.6
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 5.6e-197 691.0 434 78.8
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 7.4e-197 690.6 430 80.9
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 2.1e-196 689.1 383 93.7
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 1.4e-195 686.4 433 79.7
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 1.8e-195 686.0 429 80.2
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 2.0e-194 682.6 430 78.4
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 7.9e-191 670.6 430 77.4
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 1.0e-190 670.2 428 74.1
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.8e-190 669.5 429 76.2
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 5.1e-190 667.9 453 75.1
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 1.9e-189 666.0 428 77.6
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 1.4e-187 659.8 428 76.9
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 2.6e-186 655.6 428 76.4
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 4.5e-186 654.8 429 76.0
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 1.0e-185 653.7 428 75.7
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 1.7e-185 652.9 433 76.0
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 2.9e-185 652.1 426 73.0
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.1e-184 650.2 428 75.7
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 1.1e-184 650.2 433 75.3
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.4e-184 649.8 431 74.9
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.9e-184 649.4 424 74.5
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 4.2e-184 648.3 428 75.2
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 5.5e-184 647.9 428 75.7
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 7.1e-184 647.5 428 75.5
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 9.3e-184 647.1 428 71.7
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 1.2e-183 646.7 428 75.2
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.1e-183 646.0 428 75.2
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.8e-182 642.9 428 75.2
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 3.0e-182 642.1 431 72.6
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 6.7e-182 641.0 428 74.8
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.7e-182 641.0 428 72.4
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.5e-181 639.8 429 74.4
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.3e-181 638.6 428 72.2
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 9.7e-181 637.1 429 73.9
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.8e-179 632.9 430 74.2
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 2.2e-177 625.9 431 74.0
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 3.2e-176 622.1 430 72.6
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 3.2e-176 622.1 428 70.8
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 6.7e-174 614.4 428 70.6
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 6.7e-174 614.4 428 71.0
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 5.7e-173 611.3 428 70.3
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 5.7e-173 611.3 435 70.8
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 2.8e-172 609.0 428 70.1
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 2.4e-171 605.9 428 69.9
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 3.1e-171 605.5 433 70.2
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 4.1e-171 605.1 433 70.9
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 5.3e-171 604.7 434 70.0
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 6.9e-171 604.4 437 70.3
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 1.5e-170 603.2 429 70.9
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 2.7e-167 592.4 415 70.4
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 3.9e-166 588.6 435 69.7
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 2.2e-164 582.8 406 73.6
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 5.3e-163 578.2 418 66.7
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 9.1e-163 577.4 445 63.8
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 2.0e-162 576.2 418 67.9
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 3.5e-162 575.5 430 66.5
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 2.2e-161 572.8 430 68.8
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 1.9e-160 569.7 430 66.3
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 5.5e-160 568.2 438 66.9
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 2.8e-156 555.8 351 76.9
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 6.3e-156 554.7 433 65.1
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 8.2e-156 554.3 421 69.1
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 4.1e-155 552.0 434 66.1
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.6e-154 550.1 428 63.3
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 3.8e-153 545.4 429 63.2
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 5.0e-153 545.0 430 65.3
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 7.2e-152 541.2 429 60.6
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 7.2e-152 541.2 428 62.9
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 2.1e-151 539.7 428 60.3
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 3.6e-151 538.9 429 60.4
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 1.8e-150 536.6 410 70.2
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 3.0e-150 535.8 438 65.5
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 8.8e-150 534.3 429 60.4
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 3.3e-149 532.3 396 68.7
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 4.4e-149 531.9 428 60.0
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 9.7e-149 530.8 428 61.0
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 1.7e-148 530.0 429 60.4
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 3.7e-148 528.9 414 60.6
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 1.1e-147 527.3 429 59.4
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 7.0e-147 524.6 329 76.6
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 3.5e-146 522.3 461 59.2
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 8.5e-145 517.7 418 60.3
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 4.2e-144 515.4 429 58.7
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 4.2e-144 515.4 412 66.7
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 2.3e-142 509.6 415 65.5
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 5.2e-142 508.4 433 58.7
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 4.8e-140 501.9 412 62.6
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 3.3e-136 489.2 442 62.2
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 7.2e-136 488.0 429 56.4
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 4.0e-134 482.3 404 61.9
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.5e-133 480.3 398 59.0
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 2.8e-132 476.1 409 60.4
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.4e-131 473.0 426 58.9
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 5.4e-131 471.9 423 58.4
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.0e-121 441.0 329 67.5
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 7.3e-120 434.9 264 83.0
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.9e-107 393.7 428 50.5
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 8.9e-102 374.8 305 65.6
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 9.0e-94 348.2 400 47.2
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.1e-86 324.7 401 46.1
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 6.4e-84 315.5 217 67.3
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 1.4e-83 314.3 426 43.2
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 1.3e-81 307.8 426 43.7
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.3e-79 301.2 318 52.8
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 2.0e-77 293.9 305 49.8
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.9e-76 289.3 201 67.7
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-59 235.0 166 65.1
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 3.7e-55 219.9 134 76.1
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 3.7e-55 219.9 157 69.4
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 4.5e-53 213.0 135 68.9
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 2.2e-44 184.1 223 45.3
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 3.9e-41 173.3 98 79.6
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 5.7e-40 169.5 125 64.8
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.4e-38 164.9 125 63.2
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 1.3e-36 158.3 113 74.3
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.1e-30 138.7 82 80.5
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 4.2e-27 126.7 83 72.3
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 1.7e-23 114.8 92 70.7
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.1e-18 97.8 93 60.2
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 9.2e-14 82.4 51 66.7
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 4.7e-10 70.1 52 57.7


User provided reference genes

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