Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 2.1e-74 282.3 149 100.0
VMungo1383G0797 Vigna mungo HOM05D007217 ORTHO05D009092 6.8e-57 224.2 137 84.7
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 4.9e-55 218.0 142 79.6
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 7.0e-54 214.2 155 76.1
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 7.5e-48 194.1 143 70.6
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 7.5e-40 167.5 148 60.1
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 2.1e-37 159.5 121 66.1
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 6.2e-34 147.9 133 58.6
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 1.8e-33 146.4 149 56.4
Psat4g125640 Pisum sativum HOM05D007217 ORTHO05D009092 6.8e-33 144.4 152 54.6
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea HOM05D007217 ORTHO05D009092 5.4e-30 134.8 134 55.2
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea HOM05D007217 ORTHO05D009092 1.7e-28 129.8 122 57.4
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea HOM05D007217 ORTHO05D009092 3.0e-28 129.0 122 55.7
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 3.1e-25 119.0 103 60.2
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 2.0e-24 116.3 108 51.9
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 5.8e-24 114.8 107 52.3
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 4.2e-22 108.6 133 41.4
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 4.6e-21 105.1 123 48.8
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 4.6e-21 105.1 129 47.3
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 6.0e-21 104.8 103 53.4
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 6.0e-21 104.8 133 41.4
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 1.0e-20 104.0 129 46.5
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 1.3e-20 103.6 115 45.2
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 1.3e-20 103.6 105 49.5
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 3.0e-20 102.4 105 49.5
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 3.9e-20 102.1 103 52.4
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 3.9e-20 102.1 129 47.3
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 6.6e-20 101.3 132 44.7
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 6.6e-20 101.3 123 46.3
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 1.1e-19 100.5 130 43.1
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 1.5e-19 100.1 123 47.2
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.5e-19 100.1 106 50.9
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.9e-19 99.8 117 45.3
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 2.5e-19 99.4 121 46.3
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 2.5e-19 99.4 100 51.0
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 3.3e-19 99.0 125 46.4
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 4.3e-19 98.6 106 50.0
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 5.6e-19 98.2 119 47.9
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 5.6e-19 98.2 83 61.4
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 7.3e-19 97.8 115 47.0
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 7.3e-19 97.8 117 44.4
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 7.3e-19 97.8 103 47.6
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 7.3e-19 97.8 128 43.8
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 9.6e-19 97.4 105 48.6
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 9.6e-19 97.4 103 48.5
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 9.6e-19 97.4 103 48.5
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 1.3e-18 97.1 130 40.8
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 2.1e-18 96.3 84 57.1
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 2.8e-18 95.9 96 52.1
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 2.8e-18 95.9 121 45.5
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 8.1e-18 94.4 102 48.0
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 1.1e-17 94.0 120 45.8
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 1.4e-17 93.6 96 50.0
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 4.0e-17 92.0 88 51.1
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 6.9e-17 91.3 119 42.9
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 9.0e-17 90.9 115 43.5
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 1.5e-16 90.1 102 46.1
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 2.0e-16 89.7 104 45.2
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 4.5e-16 88.6 101 46.5
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 5.8e-16 88.2 100 45.0
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 5.8e-16 88.2 104 48.1
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 9.9e-16 87.4 81 56.8
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 1.3e-15 87.0 103 44.7
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 1.7e-15 86.7 113 44.2
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 4.9e-15 85.1 115 41.7
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 8.4e-15 84.3 100 43.0
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 8.4e-15 84.3 82 52.4
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 8.4e-15 84.3 137 38.7
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 8.4e-15 84.3 113 40.7
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 1.1e-14 84.0 94 51.1
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 1.4e-14 83.6 115 40.9
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 1.4e-14 83.6 133 36.1
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 1.9e-14 83.2 133 36.8
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 2.4e-14 82.8 115 40.9
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 3.2e-14 82.4 101 44.6
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 3.2e-14 82.4 110 42.7
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 5.4e-14 81.6 126 40.5
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 5.4e-14 81.6 134 40.3
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 3.5e-13 79.0 100 44.0
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.8e-12 76.6 78 51.3
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 2.3e-12 76.3 126 38.1
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 5.1e-12 75.1 93 41.9
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 5.1e-12 75.1 94 43.6
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 5.1e-12 75.1 86 51.2
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.5e-11 73.6 78 50.0
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 1.5e-11 73.6 68 52.9
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 1.9e-11 73.2 78 48.7
CDE03G0339 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 7.4e-11 71.2 66 53.0
CDE03G0351 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 7.4e-11 71.2 66 53.0
Ca_31281_v3 Cicer arietinum L. HOM05D007217 ORTHO05D009092 7.4e-11 71.2 59 59.3
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 1.3e-10 70.5 64 54.7
TAR722G0002 Trochodendron aralioides HOM05D007217 ORTHO05D009092 1.3e-10 70.5 114 39.5
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 1.1e-09 67.4 129 35.7
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 1.4e-09 67.0 145 32.4
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 2.4e-09 66.2 89 42.7
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 9.0e-09 64.3 99 39.4
GSVIVG01013634001 Vitis vinifera HOM05D007217 ORTHO05D009092 1.5e-08 63.5 116 33.6
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 2.6e-08 62.8 87 40.2
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 2.6e-08 62.8 87 40.2
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 5.8e-08 61.6 49 61.2
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 7.6e-08 61.2 127 35.4
ATR0763G267 Amborella trichopoda HOM05D007217 ORTHO05D009092 1.4e-06 57.0 132 34.1
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 2.4e-06 56.2 136 30.1
Zm00001eb228930 Zea mays HOM05D007217 ORTHO05D009092 5.5e-06 55.1 88 35.2
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 7.1e-06 54.7 47 55.3


User provided reference genes

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