Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G108100 Phaseolus vulgaris HOM05D006952 ORTHO05D008687 1.1e-62 243.0 113 100.0
VMungo1383G2957 Vigna mungo HOM05D006952 ORTHO05D008687 1.2e-61 239.6 113 98.2
Glyma.18G196300 Glycine max HOM05D006952 ORTHO05D008687 3.2e-59 231.5 113 94.7
arahy.Tifrunner.gnm1.ann1.ES8MJM Arachis hypogaea HOM05D006952 ORTHO05D008687 2.1e-58 228.8 113 92.0
Lalb_Chr03g0042961 Lupinus albus HOM05D006952 ORTHO05D008687 1.4e-57 226.1 113 91.2
arahy.Tifrunner.gnm1.ann1.EMW6YX Arachis hypogaea HOM05D006952 ORTHO05D008687 1.8e-57 225.7 112 91.1
Glyma.07G144600 Glycine max HOM05D006952 ORTHO05D008687 3.0e-57 224.9 113 92.9
Cfa017257 Carpinus fangiana HOM05D006952 ORTHO05D008687 3.3e-56 221.5 113 90.3
Haze_20948 Corylus avellana HOM05D006952 ORTHO05D008687 3.3e-56 221.5 113 90.3
CANSAT35G1060 Cannabis sativa HOM05D006952 ORTHO05D008687 6.3e-55 217.2 113 85.0
Nn2g11358 Nelumbo nucifera HOM05D006952 ORTHO05D008687 9.1e-54 213.4 113 85.0
Cpa.g.sc56.113 Carica papaya HOM05D006952 ORTHO05D008687 1.2e-53 213.0 113 86.7
Prupe.6G270600 Prunus persica HOM05D006952 ORTHO05D008687 2.0e-53 212.2 113 85.0
Ciclev10013166m.g Citrus clementina HOM05D006952 ORTHO05D008687 3.5e-53 211.5 113 88.5
Sed0014444 Sechium edule HOM05D006952 ORTHO05D008687 4.5e-53 211.1 113 85.0
CiPaw.10G154300 Carya illinoinensis HOM05D006952 ORTHO05D008687 5.9e-53 210.7 113 85.8
CsaV3_3G034170 Cucumis sativus L. HOM05D006952 ORTHO05D008687 1.0e-52 209.9 113 83.2
MELO3C009193.2 Cucumis melo HOM05D006952 ORTHO05D008687 1.7e-52 209.1 113 84.1
Lalb_Chr19g0124771 Lupinus albus HOM05D006952 ORTHO05D008687 1.7e-52 209.1 113 85.0
TPR.G1575 Trifolium pratense HOM05D006952 ORTHO05D008687 2.2e-52 208.8 113 85.8
Medtr7g066800 Medicago truncatula HOM05D006952 ORTHO05D008687 2.9e-52 208.4 113 84.1
Phvul.010G008400 Phaseolus vulgaris HOM05D006952 ORTHO05D008687 3.8e-52 208.0 113 85.8
PGR031G1789 Punica granatum HOM05D006952 ORTHO05D008687 5.0e-52 207.6 113 83.2
TAR636G2834 Trochodendron aralioides HOM05D006952 ORTHO05D008687 5.0e-52 207.6 113 84.1
Duzib128G2003 Durio zibethinus HOM05D006952 ORTHO05D008687 6.5e-52 207.2 113 85.0
Psat0s1978g0040 Pisum sativum HOM05D006952 ORTHO05D008687 8.5e-52 206.8 113 84.1
Lj3g0025387 Lotus japonicus HOM05D006952 ORTHO05D008687 1.1e-51 206.5 113 85.0
Thecc.05G022400 Theobroma cacao HOM05D006952 ORTHO05D008687 1.5e-51 206.1 113 85.0
Gohir.D09G158700 Gossypium hirsutum HOM05D006952 ORTHO05D008687 2.5e-51 205.3 113 84.1
Gorai.006G180400 Gossypium raimondii HOM05D006952 ORTHO05D008687 2.5e-51 205.3 113 84.1
Atru.chr8.2194 Acer truncatum HOM05D006952 ORTHO05D008687 1.6e-50 202.6 113 81.4
CiPaw.09G205900 Carya illinoinensis HOM05D006952 ORTHO05D008687 2.1e-50 202.2 113 80.5
Duzib093G2046 Durio zibethinus HOM05D006952 ORTHO05D008687 6.1e-50 200.7 113 82.3
Gohir.A09G163200 Gossypium hirsutum HOM05D006952 ORTHO05D008687 1.0e-49 199.9 113 83.2
Glyma.03G077100 Glycine max HOM05D006952 ORTHO05D008687 2.3e-49 198.7 113 81.4
Hma1.2p1_0763F.1_g214620 Hydrangea macrophylla HOM05D006952 ORTHO05D008687 3.0e-49 198.4 113 81.4
Cc06_g01680 Coffea canephora HOM05D006952 ORTHO05D008687 6.7e-49 197.2 113 79.6
Glyma.01G111500 Glycine max HOM05D006952 ORTHO05D008687 8.8e-49 196.8 113 81.4
Potri.016G110900 Populus trichocarpa HOM05D006952 ORTHO05D008687 3.3e-48 194.9 113 81.4
Nn2g13603 Nelumbo nucifera HOM05D006952 ORTHO05D008687 5.7e-48 194.1 110 78.2
MSTRG.5599 Avicennia marina HOM05D006952 ORTHO05D008687 7.5e-48 193.7 113 76.1
TWI77G0025 Tripterygium wilfordii HOM05D006952 ORTHO05D008687 9.7e-48 193.4 113 80.5
Manes.08G087500 Manihot esculenta HOM05D006952 ORTHO05D008687 1.3e-47 193.0 113 80.5
PSO339G3931 Papaver somniferum HOM05D006952 ORTHO05D008687 1.7e-47 192.6 113 75.2
MSTRG.19031 Avicennia marina HOM05D006952 ORTHO05D008687 2.2e-47 192.2 113 78.8
Sed0025859 Sechium edule HOM05D006952 ORTHO05D008687 2.2e-47 192.2 109 79.8
TAR369G0842 Trochodendron aralioides HOM05D006952 ORTHO05D008687 2.2e-47 192.2 113 80.5
Aqoxy1G00719 Aquilegia oxysepala HOM05D006952 ORTHO05D008687 2.8e-47 191.8 111 75.7
Potri.006G096200 Populus trichocarpa HOM05D006952 ORTHO05D008687 8.2e-47 190.3 113 80.5
Migut.J00227 Erythranthe guttata HOM05D006952 ORTHO05D008687 1.1e-46 189.9 113 74.3
Potri.004G103400 Populus trichocarpa HOM05D006952 ORTHO05D008687 1.1e-46 189.9 113 80.5
Sopen09g007000 Solanum pennellii HOM05D006952 ORTHO05D008687 1.8e-46 189.1 113 77.0
ATR0618G178 Amborella trichopoda HOM05D006952 ORTHO05D008687 2.4e-46 188.7 113 76.1
PGSC0003DMG400020322 Solanum tuberosum HOM05D006952 ORTHO05D008687 2.4e-46 188.7 113 77.0
Duzib106G1795 Durio zibethinus HOM05D006952 ORTHO05D008687 3.1e-46 188.3 113 78.8
Oeu015014.1 Olea europaea HOM05D006952 ORTHO05D008687 3.1e-46 188.3 113 77.9
RcHm_v2.0_Chr3g0463891 Rosa chinensis HOM05D006952 ORTHO05D008687 3.1e-46 188.3 108 78.7
Eucgr.B02782 Eucalyptus grandis HOM05D006952 ORTHO05D008687 7.0e-46 187.2 113 75.2
CAN.G355.18 Capsicum annuum HOM05D006952 ORTHO05D008687 9.1e-46 186.8 113 76.1
Manes.09G102000 Manihot esculenta HOM05D006952 ORTHO05D008687 1.6e-45 186.0 113 80.5
PSO384G3323 Papaver somniferum HOM05D006952 ORTHO05D008687 1.6e-45 186.0 113 74.3
TWI74G1053 Tripterygium wilfordii HOM05D006952 ORTHO05D008687 1.6e-45 186.0 113 79.6
MBI14_g32939_MAGBIO Magnolia biondii HOM05D006952 ORTHO05D008687 2.0e-45 185.7 113 75.2
MD04G1146800 Malus domestica HOM05D006952 ORTHO05D008687 3.8e-44 181.4 108 76.9
DCAR_024036 Daucus carota HOM05D006952 ORTHO05D008687 6.5e-44 180.6 113 71.7
DCAR_024037 Daucus carota HOM05D006952 ORTHO05D008687 6.5e-44 180.6 113 71.7
Oeu030529.1 Olea europaea HOM05D006952 ORTHO05D008687 6.5e-44 180.6 110 76.4
Hma1.2p1_0244F.1_g101210 Hydrangea macrophylla HOM05D006952 ORTHO05D008687 1.1e-43 179.9 108 76.9
SalBow5G3631 Salvia bowleyana HOM05D006952 ORTHO05D008687 1.5e-43 179.5 113 74.3
FAN09G1020 Fragaria x ananassa HOM05D006952 ORTHO05D008687 2.5e-43 178.7 107 74.8
Actinidia05346 Actinidia chinensis HOM05D006952 ORTHO05D008687 3.2e-43 178.3 103 78.6
THA.LOC104816220 Tarenaya hassleriana HOM05D006952 ORTHO05D008687 4.2e-43 177.9 108 76.9
Carub.0003s0825 Capsella rubella HOM05D006952 ORTHO05D008687 9.4e-43 176.8 111 72.1
AL3G20160 Arabidopsis lyrata HOM05D006952 ORTHO05D008687 2.1e-42 175.6 111 71.2
Solyc09g013140.3 Solanum lycopersicum HOM05D006952 ORTHO05D008687 2.1e-42 175.6 108 75.0
AT3G09085 Arabidopsis thaliana HOM05D006952 ORTHO05D008687 1.4e-41 172.9 111 71.2
CARHR083460 Cardamine hirsuta HOM05D006952 ORTHO05D008687 1.4e-41 172.9 111 72.1
BraA01t04315Z Brassica rapa HOM05D006952 ORTHO05D008687 1.8e-41 172.6 110 74.5
Sp3g07540 Schrenkiella parvula HOM05D006952 ORTHO05D008687 1.8e-41 172.6 111 72.1
BcaC09g48008 Brassica carinata HOM05D006952 ORTHO05D008687 2.3e-41 172.2 110 73.6
BcaC09g48053 Brassica carinata HOM05D006952 ORTHO05D008687 2.3e-41 172.2 110 74.5
BolC1t05474H Brassica oleracea HOM05D006952 ORTHO05D008687 3.0e-41 171.8 110 74.5
Thhalv10021991m.g Eutrema salsugineum HOM05D006952 ORTHO05D008687 6.8e-41 170.6 111 71.2
HanXRQChr13g0406321 Helianthus annuus HOM05D006952 ORTHO05D008687 1.5e-40 169.5 112 68.8
TPR.G5256 Trifolium pratense HOM05D006952 ORTHO05D008687 2.0e-40 169.1 113 68.1
Pp3c15_15480 Physcomitrium patens HOM05D006952 ORTHO05D008687 3.4e-40 168.3 111 67.6
SMO116G0119 Selaginella moellendorffii HOM05D006952 ORTHO05D008687 4.4e-40 167.9 113 67.3
TPR.G6676 Trifolium pratense HOM05D006952 ORTHO05D008687 1.7e-39 166.0 113 66.4
Rhsim04G0165900 Rhododendron simsii HOM05D006952 ORTHO05D008687 3.7e-39 164.9 105 71.4
HanXRQChr13g0406361 Helianthus annuus HOM05D006952 ORTHO05D008687 8.3e-39 163.7 103 69.9
Medtr4g014970 Medicago truncatula HOM05D006952 ORTHO05D008687 1.1e-38 163.3 110 67.3
HPP92_012624 Vanilla planifolia HOM05D006952 ORTHO05D008687 1.1e-38 163.3 111 71.2
Pp3c9_14060 Physcomitrium patens HOM05D006952 ORTHO05D008687 2.4e-38 162.2 110 64.5
AagrBONN_evm.TU.Sc2ySwM_228.2345 Anthoceros agrestis HOM05D001533 ORTHO05D003743 5.4e-38 161.0 110 63.6
HanXRQChr13g0406351 Helianthus annuus HOM05D006952 ORTHO05D008687 7.0e-38 160.6 104 67.3
DCAR_008639 Daucus carota HOM05D006952 ORTHO05D008687 2.0e-37 159.1 113 65.5
Ah.15g089870 Amaranthus hybridus HOM05D006952 ORTHO05D008687 2.7e-37 158.7 113 68.1
Lsat_1_v5_gn_5_155300 Lactuca sativa HOM05D006952 ORTHO05D008687 5.9e-37 157.5 102 66.7
Lsat_1_v5_gn_5_155361 Lactuca sativa HOM05D006952 ORTHO05D008687 6.5e-36 154.1 108 63.0
HanXRQChr13g0406341 Helianthus annuus HOM05D006952 ORTHO05D008687 5.7e-32 141.0 111 57.7
Cc02_g31680 Coffea canephora HOM05D006952 ORTHO05D008687 9.8e-32 140.2 100 71.0
CSS0036371 Camellia sinensis var. sinensis HOM05D006952 ORTHO05D008687 1.1e-30 136.7 105 60.0
Cc07_g20110 Coffea canephora HOM05D006952 ORTHO05D008687 3.1e-30 135.2 115 65.2
Sabra06G0073900 Salix brachista HOM05D006952 ORTHO05D008687 7.8e-29 130.6 113 62.8
Psat0s1978g0160 Pisum sativum HOM05D006607 ORTHO05D008166 7.3e-27 124.0 96 63.5
Zm00001eb011810 Zea mays HOM05D006952 ORTHO05D008687 1.2e-26 123.2 109 56.0
Os03g0265800 Oryza sativa ssp. japonica HOM05D006952 ORTHO05D008687 2.8e-26 122.1 104 57.7
Nitab4.5_0011723g0010 Nicotiana tabacum HOM05D006952 ORTHO05D008687 1.8e-25 119.4 107 54.2
Mapoly0072s0073 Marchantia polymorpha HOM05D006952 ORTHO05D008687 5.2e-25 117.9 107 54.2
SEGI_04409 Sequoiadendron giganteum HOM05D006952 ORTHO05D008687 8.9e-25 117.1 113 52.2
GSVIVG01034013001 Vitis vinifera HOM05D006952 ORTHO05D008687 9.2e-22 107.1 52 92.3
TAR731G0001 Trochodendron aralioides HOM05D000320 ORTHO05D000532 1.6e-10 69.7 54 63.0
RcHm_v2.0_Chr4g0412041 Rosa chinensis HOM05D006952 ORTHO05D008687 4.7e-10 68.2 41 70.7
Cre03.g188900 Chlamydomonas reinhardtii HOM05D006952 ORTHO05D008687 2.3e-09 65.9 94 41.5
EL10Ac2g02574 Beta vulgaris HOM05D006952 ORTHO05D008687 1.9e-06 56.2 27 85.2
SEGI_08039 Sequoiadendron giganteum HOM05D006952 ORTHO05D008687 2.4e-06 55.8 74 40.5


User provided reference genes

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