Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 9.7e-128 460.3 256 100.0
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 1.4e-110 403.3 256 85.2
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 5.0e-100 368.2 257 79.8
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 1.1e-91 340.5 239 78.2
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 9.8e-88 327.4 257 70.0
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 1.6e-82 310.1 257 68.1
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 6.8e-81 304.7 258 67.4
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 3.4e-80 302.4 255 65.5
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 4.9e-79 298.5 258 66.7
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 1.4e-73 280.4 255 64.3
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 2.2e-71 273.1 255 62.7
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 7.8e-69 264.6 240 63.3
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 1.4e-65 253.8 255 59.6
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 1.2e-64 250.8 256 55.9
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 1.4e-57 227.3 214 62.1
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 1.8e-57 226.9 244 58.6
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 1.9e-54 216.9 253 52.6
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 1.9e-54 216.9 254 53.5
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 2.4e-54 216.5 255 54.9
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 2.4e-54 216.5 255 54.9
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 2.4e-54 216.5 239 56.5
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 4.2e-54 215.7 258 54.3
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 4.6e-53 212.2 257 54.1
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 1.7e-52 210.3 267 47.2
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 2.3e-52 209.9 257 51.0
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.6e-50 203.8 224 50.9
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 1.6e-50 203.8 221 61.1
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.6e-50 203.8 261 49.4
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 1.6e-50 203.8 257 54.9
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 2.1e-50 203.4 266 49.2
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 2.8e-50 203.0 259 51.4
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 6.2e-50 201.8 260 50.0
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 1.1e-49 201.1 259 54.1
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 2.4e-49 199.9 259 53.7
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 4.0e-49 199.1 247 49.4
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 4.0e-49 199.1 245 49.8
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 5.3e-49 198.7 260 50.8
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 2.0e-48 196.8 255 47.8
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 2.0e-48 196.8 261 51.3
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 2.6e-48 196.4 262 46.2
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 7.6e-48 194.9 250 54.4
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 1.3e-47 194.1 219 58.4
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 4.9e-47 192.2 259 50.2
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 4.9e-47 192.2 259 50.2
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 4.9e-47 192.2 258 51.6
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 6.4e-47 191.8 252 52.0
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 6.4e-47 191.8 258 50.8
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 1.1e-46 191.0 252 51.6
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.4e-46 190.7 252 47.2
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 1.4e-46 190.7 255 49.4
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 1.9e-46 190.3 252 51.6
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 1.9e-46 190.3 271 44.6
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 1.9e-46 190.3 260 49.2
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 3.2e-46 189.5 257 50.6
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 3.2e-46 189.5 260 48.8
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 7.1e-46 188.3 256 50.0
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 9.3e-46 188.0 260 49.6
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 9.3e-46 188.0 273 50.2
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 1.2e-45 187.6 246 54.5
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 1.2e-45 187.6 244 52.9
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 1.6e-45 187.2 263 50.2
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 2.1e-45 186.8 260 48.1
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 3.5e-45 186.0 258 50.4
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 6.0e-45 185.3 248 52.0
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 7.8e-45 184.9 253 52.6
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 2.3e-44 183.3 252 53.2
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 8.7e-44 181.4 261 49.8
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 1.1e-43 181.0 244 51.2
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 3.3e-43 179.5 259 47.9
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 3.3e-43 179.5 256 50.8
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 4.3e-43 179.1 235 50.6
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 7.3e-43 178.3 215 54.4
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 9.6e-43 177.9 243 51.0
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 1.3e-42 177.6 239 51.9
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 4.8e-42 175.6 218 54.1
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 6.2e-42 175.3 197 55.8
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 6.2e-42 175.3 214 53.3
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 8.1e-42 174.9 246 49.2
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 1.4e-41 174.1 256 48.8
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 1.4e-41 174.1 246 48.8
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.8e-41 173.7 260 48.8
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 2.4e-41 173.3 247 49.0
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 6.9e-41 171.8 250 46.0
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 1.5e-40 170.6 253 51.0
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 5.8e-40 168.7 218 47.7
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 5.8e-40 168.7 226 52.7
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 7.6e-40 168.3 246 48.0
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 7.6e-40 168.3 246 48.0
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 7.6e-40 168.3 269 46.5
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 9.9e-40 167.9 246 48.0
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 9.9e-40 167.9 268 45.9
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 1.7e-39 167.2 228 50.0
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 2.2e-39 166.8 228 50.0
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 6.4e-39 165.2 260 46.5
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 8.4e-39 164.9 259 45.6
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 2.4e-38 163.3 258 45.7
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 3.2e-38 162.9 214 47.2
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 4.2e-38 162.5 263 46.0
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 5.4e-38 162.2 255 47.8
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.2e-37 161.0 263 46.0
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 2.1e-37 160.2 255 45.1
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 3.5e-37 159.5 253 47.4
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 3.5e-37 159.5 258 47.3
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 1.3e-36 157.5 251 49.4
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 1.3e-36 157.5 262 44.7
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 3.9e-36 156.0 257 41.6
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 1.1e-35 154.5 226 47.8
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 1.5e-35 154.1 225 49.8
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 5.6e-35 152.1 249 41.4
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 1.6e-34 150.6 265 43.4
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 3.7e-34 149.4 237 44.7
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 1.4e-33 147.5 261 44.8
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 2.0e-32 143.7 146 55.5
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 5.5e-30 135.6 196 46.9
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 6.7e-28 128.6 196 47.4
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 2.1e-26 123.6 147 50.3
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 8.2e-26 121.7 176 40.9
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 1.4e-25 120.9 215 32.1
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 1.4e-25 120.9 142 47.2
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 6.9e-25 118.6 145 49.0
Lalb_Chr03g0043011 Lupinus albus HOM05D005866 ORTHO05D007078 1.5e-24 117.5 80 72.5
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 2.6e-24 116.7 204 34.8
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 2.2e-23 113.6 232 33.2
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 5.5e-22 109.0 201 33.3
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 1.6e-21 107.5 140 46.4
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 6.3e-18 95.5 180 32.8
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 7.7e-16 88.6 84 54.8
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 5.0e-15 85.9 113 43.4
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 6.5e-15 85.5 234 29.1
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 1.6e-13 80.9 202 28.7
SGA_v2.0_scaffold1443G53951 Striga asiatica HOM05D005866 ORTHO05D007078 2.1e-13 80.5 90 47.8
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 8.8e-12 75.1 113 44.2
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 7.4e-11 72.0 220 25.0
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 4.8e-10 69.3 85 48.2
Pp3c23_6870 Physcomitrium patens HOM05D005866 ORTHO05D007078 2.4e-09 67.0 214 28.0
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 1.5e-08 64.3 98 38.8
Ah.07g199780 Amaranthus hybridus HOM05D005866 ORTHO05D007078 1.9e-06 57.4 80 41.2


User provided reference genes

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