Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G106800 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 7.7e-65 250.4 129 100.0
VMungo1383G3137 Vigna mungo HOM05D004233 ORTHO05D003507 1.1e-63 246.5 128 98.4
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 5.9e-49 197.6 129 82.9
Glyma.18G197700 Glycine max HOM05D004233 ORTHO05D003507 5.0e-48 194.5 130 83.1
Medtr2g013470 Medicago truncatula HOM05D004233 ORTHO05D003507 8.3e-35 150.6 130 68.5
Ca_00329_v3 Cicer arietinum L. HOM05D004233 ORTHO05D003507 4.1e-34 148.3 129 67.4
TPR.G29052 Trifolium pratense HOM05D004233 ORTHO05D003507 7.0e-34 147.5 135 68.1
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 6.5e-32 141.0 128 61.7
Lj6g0009965 Lotus japonicus HOM05D004233 ORTHO05D003507 8.6e-32 140.6 129 64.3
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 2.5e-31 139.0 128 62.5
Glyma.15G073400 Glycine max HOM05D004233 ORTHO05D003507 3.2e-31 138.7 131 66.4
Medtr7g067365 Medicago truncatula HOM05D004233 ORTHO05D003507 7.2e-31 137.5 129 65.9
TPR.G1552 Trifolium pratense HOM05D004233 ORTHO05D003507 3.6e-30 135.2 129 62.0
Phvul.006G186000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 4.7e-30 134.8 130 63.8
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 8.0e-30 134.0 130 58.5
Psat3g130680 Pisum sativum HOM05D004233 ORTHO05D003507 1.0e-29 133.7 130 62.3
Glyma.13G239800 Glycine max HOM05D004233 ORTHO05D003507 1.8e-29 132.9 131 64.1
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 1.8e-29 132.9 128 58.6
Lalb_Chr03g0043081 Lupinus albus HOM05D004233 ORTHO05D003507 2.0e-28 129.4 127 63.8
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.8e-27 125.6 127 59.8
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 6.3e-27 124.4 126 56.3
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 1.1e-26 123.6 127 57.5
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 1.8e-26 122.9 129 62.8
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.4e-26 122.5 127 58.3
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 3.1e-26 122.1 123 56.9
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 4.1e-26 121.7 125 60.0
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 7.0e-26 120.9 125 58.4
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 9.2e-26 120.6 128 61.7
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.6e-25 119.8 124 58.9
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 2.7e-25 119.0 124 56.5
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 4.5e-25 118.2 125 55.2
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 4.5e-25 118.2 127 58.3
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 1.0e-24 117.1 128 60.9
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 2.9e-24 115.5 128 58.6
Lalb_Chr15g0089821 Lupinus albus HOM05D004233 ORTHO05D003507 3.8e-24 115.2 131 56.5
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 5.0e-24 114.8 128 57.0
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 2.5e-23 112.5 131 54.2
arahy.Tifrunner.gnm1.ann1.BL7XQ3 Arachis hypogaea HOM05D004233 ORTHO05D003507 7.3e-23 110.9 127 56.7
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.6e-22 109.8 128 54.7
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.6e-22 109.8 128 54.7
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 2.1e-22 109.4 130 53.1
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.6e-22 108.6 127 52.8
MD12G1161500 Malus domestica HOM05D004233 ORTHO05D003507 6.1e-22 107.8 128 51.6
Lalb_Chr13g0291241 Lupinus albus HOM05D004233 ORTHO05D003507 1.0e-21 107.1 102 59.8
MELO3C009185.2 Cucumis melo HOM05D004233 ORTHO05D003507 1.8e-21 106.3 128 57.0
Rhsim04G0131700 Rhododendron simsii HOM05D004233 ORTHO05D003507 2.3e-21 105.9 127 50.4
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 5.2e-21 104.8 127 52.8
ClCG10G021920 Citrullus lanatus HOM05D004233 ORTHO05D003507 1.5e-20 103.2 128 56.2
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 2.6e-20 102.4 117 55.6
RcHm_v2.0_Chr3g0463681 Rosa chinensis HOM05D004233 ORTHO05D003507 1.7e-19 99.8 132 54.5
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 2.9e-19 99.0 125 55.2
FAN09G0897 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.9e-19 98.2 136 52.9
FvH4_6g11920 Fragaria vesca HOM05D004233 ORTHO05D003507 1.4e-18 96.7 136 52.2
FAN05G3657 Fragaria x ananassa HOM05D004233 ORTHO05D003507 1.4e-18 96.7 136 52.2
FAN14G3430 Fragaria x ananassa HOM05D004233 ORTHO05D003507 1.4e-18 96.7 136 52.2
FAN14G4547 Fragaria x ananassa HOM05D004233 ORTHO05D003507 1.4e-18 96.7 136 52.2
FAN02G0664 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.1e-18 95.1 136 51.5
Sed0021305 Sechium edule HOM05D004233 ORTHO05D003507 5.4e-18 94.7 124 53.2
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 1.2e-17 93.6 127 47.2
PGR004G1616 Punica granatum HOM05D004233 ORTHO05D003507 1.6e-17 93.2 135 53.3
TAR369G1066 Trochodendron aralioides HOM05D004233 ORTHO05D003507 1.6e-17 93.2 127 49.6
CsaV3_3G034080 Cucumis sativus L. HOM05D004233 ORTHO05D003507 2.0e-17 92.8 128 52.3
Sed0017480 Sechium edule HOM05D004233 ORTHO05D003507 4.6e-17 91.7 130 53.8
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 6.6e-16 87.8 79 65.8
Aqoxy4G02651 Aquilegia oxysepala HOM05D004233 ORTHO05D003507 4.3e-15 85.1 128 45.3
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.3e-15 85.1 68 69.1
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.3e-15 85.1 68 69.1
Oeu030524.1 Olea europaea HOM05D004233 ORTHO05D003507 5.6e-15 84.7 122 42.6
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 9.5e-15 84.0 68 67.6
MBI06_g42853_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 4.7e-14 81.6 126 44.4
Oeu024626.1 Olea europaea HOM05D004233 ORTHO05D003507 8.0e-14 80.9 125 42.4
Gohir.D04G129214 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.5e-12 76.6 108 47.2
Gorai.012G112300 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.5e-12 76.6 108 47.2
CANSAT35G0502 Cannabis sativa HOM05D004233 ORTHO05D003507 2.0e-12 76.3 149 45.6
Oeu055173.1 Olea europaea HOM05D004233 ORTHO05D003507 2.0e-12 76.3 120 43.3
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 3.4e-12 75.5 124 40.3
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 1.7e-11 73.2 125 38.4
Gohir.A04G088850 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.2e-11 72.8 108 45.4
TPR.G24023 Trifolium pratense HOM05D010371 ORTHO05D003507 4.9e-11 71.6 97 46.4
Ca_05588_v3 Cicer arietinum L. HOM05D010371 ORTHO05D003507 1.4e-10 70.1 97 45.4
Lsat_1_v5_gn_9_35941 Lactuca sativa HOM05D004233 ORTHO05D003507 1.4e-10 70.1 123 43.9
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 1.9e-10 69.7 123 40.7
Psat2g059280 Pisum sativum HOM05D010371 ORTHO05D003507 1.9e-10 69.7 114 43.9
Phvul.008G262500 Phaseolus vulgaris HOM05D010371 ORTHO05D003507 4.1e-10 68.6 115 39.1
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 4.1e-10 68.6 126 38.1
Glyma.14G192400 Glycine max HOM05D010371 ORTHO05D003507 5.4e-10 68.2 115 37.4
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 5.4e-10 68.2 115 42.6
ClCG04G007170 Citrullus lanatus HOM05D004233 ORTHO05D003507 7.0e-10 67.8 125 44.8
Glyma.02G225600 Glycine max HOM05D010371 ORTHO05D003507 9.2e-10 67.4 115 37.4
Lalb_Chr04g0252311 Lupinus albus HOM05D010371 ORTHO05D003507 9.2e-10 67.4 127 35.4
PSO339G4028 Papaver somniferum HOM05D004233 ORTHO05D003507 9.2e-10 67.4 149 38.3
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 9.2e-10 67.4 83 47.0
Medtr5g069980 Medicago truncatula HOM05D010371 ORTHO05D003507 1.2e-09 67.0 97 45.4
MBI05_g30571_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 2.0e-09 66.2 93 46.2
THA.LOC104823286 Tarenaya hassleriana HOM05D004233 ORTHO05D003507 2.7e-09 65.9 140 43.6
LjContig00155g0017503 Lotus japonicus HOM05D010371 ORTHO05D003507 3.5e-09 65.5 97 44.3
VMungo0647G2148 Vigna mungo HOM05D010371 ORTHO05D003507 7.8e-09 64.3 115 37.4
CARHR083380 Cardamine hirsuta HOM05D004233 ORTHO05D003507 1.0e-08 63.9 140 36.4
BcaNung07269 Brassica carinata HOM05D004233 ORTHO05D003507 2.3e-08 62.8 142 34.5
Lalb_Chr10g0103281 Lupinus albus HOM05D010371 ORTHO05D003507 3.0e-08 62.4 101 43.6
Nitab4.5_0000102g0150 Nicotiana tabacum HOM05D004233 ORTHO05D003507 3.0e-08 62.4 132 34.8
DCAR_028820 Daucus carota HOM05D004233 ORTHO05D003507 5.0e-08 61.6 88 52.3
DCAR_007388 Daucus carota HOM05D004233 ORTHO05D003507 6.6e-08 61.2 113 38.9
DCAR_015449 Daucus carota HOM05D004233 ORTHO05D003507 8.6e-08 60.8 120 40.8
DCAR_018722 Daucus carota HOM05D004233 ORTHO05D003507 8.6e-08 60.8 71 54.9
THA.LOC104816214 Tarenaya hassleriana HOM05D004233 ORTHO05D003507 8.6e-08 60.8 143 42.0
CARHR211560 Cardamine hirsuta HOM05D004233 ORTHO05D003507 1.1e-07 60.5 141 41.8
Oeu045519.1 Olea europaea HOM05D004233 ORTHO05D003507 1.1e-07 60.5 110 37.3
arahy.Tifrunner.gnm1.ann1.N7G3Q4 Arachis hypogaea HOM05D010371 ORTHO05D003507 1.5e-07 60.1 97 40.2
arahy.Tifrunner.gnm1.ann1.0452KN Arachis hypogaea HOM05D010371 ORTHO05D003507 2.5e-07 59.3 97 40.2
MELO3C003231.2 Cucumis melo HOM05D004233 ORTHO05D003507 2.5e-07 59.3 104 44.2
CsaV3_4G026060 Cucumis sativus L. HOM05D004233 ORTHO05D003507 3.3e-07 58.9 106 39.6
Duzib150G0257 Durio zibethinus HOM05D004233 ORTHO05D003507 4.3e-07 58.5 91 42.9
PSO384G2407 Papaver somniferum HOM05D004233 ORTHO05D003507 4.3e-07 58.5 149 33.6
AL3G20070 Arabidopsis lyrata HOM05D004233 ORTHO05D003507 7.3e-07 57.8 145 37.2
PGSC0003DMG400004152 Solanum tuberosum HOM05D004233 ORTHO05D003507 7.3e-07 57.8 98 36.7
Cc01_g13980 Coffea canephora HOM05D004233 ORTHO05D003507 9.5e-07 57.4 87 41.4
Gohir.D05G090600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 9.5e-07 57.4 114 37.7
Gorai.009G093100 Gossypium raimondii HOM05D004233 ORTHO05D003507 9.5e-07 57.4 114 37.7
Potri.001G249500 Populus trichocarpa HOM05D004233 ORTHO05D003507 9.5e-07 57.4 122 40.2
A10p33670 Brassica napus HOM05D004233 ORTHO05D003507 1.2e-06 57.0 147 34.0
Gohir.A05G089700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.2e-06 57.0 114 37.7
BraA10t45398Z Brassica rapa HOM05D004233 ORTHO05D003507 1.6e-06 56.6 149 33.6
Haze_24266 Corylus avellana HOM05D004233 ORTHO05D003507 1.6e-06 56.6 88 44.3
CAN.G780.3 Capsicum annuum HOM05D004233 ORTHO05D003507 2.1e-06 56.2 98 34.7
Thhalv10014915m.g Eutrema salsugineum HOM05D004233 ORTHO05D003507 2.1e-06 56.2 154 33.1
Glyma.18G065800 Glycine max HOM05D010371 ORTHO05D003507 2.1e-06 56.2 89 42.7
Lsat_1_v5_gn_9_20140 Lactuca sativa HOM05D004233 ORTHO05D003507 2.1e-06 56.2 95 35.8
QL01p037420 Quercus lobata HOM05D004233 ORTHO05D003507 2.1e-06 56.2 91 39.6
BcaC06g31968 Brassica carinata HOM05D004233 ORTHO05D003507 2.8e-06 55.8 151 35.1
Glyma.11G176100 Glycine max HOM05D010371 ORTHO05D003507 3.6e-06 55.5 84 41.7
DCAR_024028 Daucus carota HOM05D004233 ORTHO05D003507 4.7e-06 55.1 52 61.5
SalBow4G0303 Salvia bowleyana HOM05D004233 ORTHO05D003507 4.7e-06 55.1 80 48.8
SalBow4G1886 Salvia bowleyana HOM05D004233 ORTHO05D003507 4.7e-06 55.1 63 57.1
Solyc06g006090.1 Solanum lycopersicum HOM05D004233 ORTHO05D003507 6.2e-06 54.7 98 33.7
AT5G01225 Arabidopsis thaliana HOM05D004233 ORTHO05D003507 8.1e-06 54.3 134 39.6
BcaNung06802 Brassica carinata HOM05D004233 ORTHO05D003507 8.1e-06 54.3 143 32.2
BolC9t60190H Brassica oleracea HOM05D004233 ORTHO05D003507 8.1e-06 54.3 143 32.2


User provided reference genes

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