Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G105800 Phaseolus vulgaris HOM05D008730 ORTHO05D010922 3.0e-108 395.2 202 100.0
VMungo1383G2265 Vigna mungo HOM05D008730 ORTHO05D010922 4.1e-89 331.6 202 85.1
Glyma.07G147500 Glycine max HOM05D008730 ORTHO05D010922 2.0e-75 286.2 200 75.0
Glyma.18G198600 Glycine max HOM05D008730 ORTHO05D010922 1.7e-74 283.1 202 75.7
Psat3g130400 Pisum sativum HOM05D008730 ORTHO05D010922 2.6e-67 259.2 202 68.8
Lj1g0001006 Lotus japonicus HOM05D008730 ORTHO05D010922 1.4e-65 253.4 204 69.1
TPR.G32773 Trifolium pratense HOM05D008730 ORTHO05D010922 4.7e-61 238.4 200 64.5
TPR.G8135 Trifolium pratense HOM05D008730 ORTHO05D010922 1.2e-59 233.8 201 64.7
Medtr7g067500 Medicago truncatula HOM05D008730 ORTHO05D010922 2.0e-59 233.0 199 63.8
Thecc.05G019000 Theobroma cacao HOM05D008730 ORTHO05D010922 3.8e-42 175.6 198 50.5
Prupe.6G274600 Prunus persica HOM05D008730 ORTHO05D010922 1.7e-39 166.8 201 51.2
CiPaw.10G155800 Carya illinoinensis HOM05D008730 ORTHO05D010922 1.9e-38 163.3 201 49.3
MD12G1164100 Malus domestica HOM05D008730 ORTHO05D010922 1.9e-38 163.3 197 52.8
Potri.006G098800 Populus trichocarpa HOM05D008730 ORTHO05D010922 1.1e-36 157.5 150 58.7
Hma1.2p1_0362F.1_g136070 Hydrangea macrophylla HOM05D008730 ORTHO05D010922 2.4e-36 156.4 209 48.8
Ciclev10013688m.g Citrus clementina HOM05D008730 ORTHO05D010922 1.5e-35 153.7 204 50.5
Aqoxy2G00930 Aquilegia oxysepala HOM05D008730 ORTHO05D010922 1.3e-34 150.6 202 48.5
Sed0022931 Sechium edule HOM05D008730 ORTHO05D010922 1.7e-34 150.2 200 47.0
MELO3C003244.2 Cucumis melo HOM05D008730 ORTHO05D010922 3.8e-34 149.1 200 48.0
FAN09G0720 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.8e-34 149.1 187 47.1
Cfa017229 Carpinus fangiana HOM05D008730 ORTHO05D010922 8.4e-34 147.9 202 48.0
ClCG04G007080 Citrullus lanatus HOM05D008730 ORTHO05D010922 8.4e-34 147.9 205 46.8
DCAR_018712 Daucus carota HOM05D008730 ORTHO05D010922 1.4e-33 147.1 201 46.3
RcHm_v2.0_Chr3g0463501 Rosa chinensis HOM05D008730 ORTHO05D010922 1.9e-33 146.7 187 47.1
CsaV3_4G026170 Cucumis sativus L. HOM05D008730 ORTHO05D010922 1.2e-32 144.1 200 47.0
Haze_20977 Corylus avellana HOM05D008730 ORTHO05D010922 1.0e-31 141.0 195 45.6
Gohir.A09G164300 Gossypium hirsutum HOM05D008730 ORTHO05D010922 1.7e-31 140.2 200 45.5
FAN05G3712 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.3e-31 139.8 184 46.2
FvH4_6g11721 Fragaria vesca HOM05D008730 ORTHO05D010922 5.1e-31 138.7 184 46.2
Gohir.D09G159900 Gossypium hirsutum HOM05D008730 ORTHO05D010922 5.1e-31 138.7 199 45.2
Gorai.006G181500 Gossypium raimondii HOM05D008730 ORTHO05D010922 5.1e-31 138.7 199 45.2
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 8.7e-31 137.9 142 52.1
FAN14G1945 Fragaria x ananassa HOM05D008730 ORTHO05D010922 8.7e-31 137.9 280 36.1
Manes.08G090500 Manihot esculenta HOM05D008730 ORTHO05D010922 1.5e-30 137.1 201 45.3
Atru.chr8.2218 Acer truncatum HOM05D008730 ORTHO05D010922 2.1e-29 133.3 206 48.5
Lsat_1_v5_gn_9_33720 Lactuca sativa HOM05D008730 ORTHO05D010922 1.6e-24 117.1 177 45.8
Migut.J00187 Erythranthe guttata HOM05D008730 ORTHO05D010922 1.3e-21 107.5 156 48.1
Potri.016G114100 Populus trichocarpa HOM05D008730 ORTHO05D010922 6.9e-20 101.7 132 48.5
Cpa.g.sc163.12 Carica papaya HOM05D008730 ORTHO05D010922 1.0e-18 97.8 183 42.1
ATR0618G247 Amborella trichopoda HOM05D008730 ORTHO05D010922 1.1e-17 94.4 218 36.7
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.2e-16 90.9 131 42.7
MD04G1149700 Malus domestica HOM05D008730 ORTHO05D010922 2.3e-15 86.7 106 52.8
Cfa017227 Carpinus fangiana HOM05D008730 ORTHO05D010922 1.1e-09 67.8 95 41.1


User provided reference genes

Program Settings