Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.9e-290 1000.7 507 100.0
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 5.5e-268 927.2 508 92.9
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 1.1e-247 859.8 509 84.5
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 2.5e-228 795.4 511 78.3
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 2.0e-225 785.8 510 77.6
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 3.4e-225 785.0 510 77.3
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 2.9e-224 781.9 510 76.3
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.4e-223 779.6 510 76.7
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 1.1e-220 770.0 508 79.5
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 1.2e-201 706.8 511 70.8
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 3.4e-193 678.7 511 66.5
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 2.5e-188 662.5 513 65.7
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 5.7e-188 661.4 525 64.0
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 7.4e-188 661.0 510 65.9
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 4.1e-186 655.2 511 65.4
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.0e-185 652.9 512 65.4
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 2.2e-184 649.4 511 64.8
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 8.5e-184 647.5 510 64.9
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 9.4e-183 644.0 511 64.2
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 3.6e-182 642.1 451 73.4
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 6.1e-182 641.3 511 65.4
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 5.1e-181 638.3 510 64.3
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 8.8e-181 637.5 552 59.6
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 1.5e-180 636.7 517 61.9
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 2.0e-180 636.3 511 63.2
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.5e-180 636.0 511 63.0
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 4.3e-180 635.2 510 64.5
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 5.7e-180 634.8 511 63.0
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.3e-179 633.6 509 62.1
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 3.7e-179 632.1 529 61.6
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 3.8e-176 622.1 510 61.6
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 3.8e-176 622.1 510 63.7
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.5e-176 621.3 510 62.5
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 6.5e-176 621.3 511 61.3
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 8.5e-176 620.9 510 61.2
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.1e-175 620.5 510 62.2
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 3.2e-175 619.0 522 60.5
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 5.5e-175 618.2 511 60.9
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 7.2e-175 617.8 514 60.9
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 1.6e-174 616.7 513 61.2
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 2.1e-174 616.3 517 60.0
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 2.7e-174 615.9 509 61.1
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 5.1e-173 611.7 511 59.1
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 5.7e-172 608.2 549 57.7
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 7.4e-172 607.8 516 60.7
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 6.3e-171 604.7 516 61.0
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 5.3e-170 601.7 513 61.0
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 5.3e-170 601.7 515 59.8
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 7.0e-170 601.3 513 60.0
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 9.1e-170 600.9 514 59.9
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.0e-168 597.4 511 60.3
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.2e-168 596.3 515 59.8
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 5.5e-167 591.7 509 59.9
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.6e-166 590.1 521 58.9
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 1.6e-166 590.1 510 59.4
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 8.0e-166 587.8 510 59.8
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 2.3e-165 586.3 510 57.3
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 3.0e-165 585.9 515 58.4
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 9.7e-164 580.9 541 57.5
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 5.3e-162 575.1 514 57.4
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 2.0e-161 573.2 513 58.7
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 1.0e-160 570.9 513 57.3
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 1.0e-160 570.9 504 56.7
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.3e-160 570.5 484 60.3
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.7e-160 570.1 517 57.4
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 2.2e-160 569.7 513 57.5
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.2e-160 569.7 519 58.0
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 6.5e-160 568.2 511 57.5
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 1.5e-159 567.0 519 57.0
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 3.2e-159 565.8 515 57.3
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 7.2e-159 564.7 495 59.2
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 1.2e-158 563.9 551 54.4
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 2.3e-157 559.7 513 56.5
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 3.0e-157 559.3 516 56.6
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 4.0e-157 558.9 512 57.0
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 4.0e-157 558.9 512 57.0
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 5.2e-157 558.5 518 56.4
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 1.2e-156 557.4 517 55.9
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 2.6e-156 556.2 512 57.0
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 5.7e-156 555.1 512 56.6
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 5.7e-156 555.1 510 56.7
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 3.7e-155 552.4 514 56.4
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 2.7e-153 546.2 497 56.9
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.0e-152 542.0 460 60.4
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 9.4e-151 537.7 585 50.3
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 1.6e-150 537.0 467 60.2
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 3.6e-150 535.8 433 63.3
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.7e-150 535.4 594 50.7
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 8.0e-150 534.6 518 54.1
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 8.8e-149 531.2 426 64.1
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 2.8e-147 526.2 387 70.3
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 2.0e-145 520.0 520 54.8
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 1.0e-144 517.7 535 54.2
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 2.6e-140 503.1 534 50.4
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.1e-138 495.7 508 51.4
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 2.0e-132 476.9 460 55.2
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 9.8e-132 474.6 519 47.2
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 2.5e-127 459.9 467 49.7
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 3.5e-113 412.9 375 58.7
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 3.9e-112 409.5 524 43.5
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 5.2e-109 399.1 342 61.4
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 4.0e-101 372.9 527 39.8
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 1.8e-93 347.4 379 48.5
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 4.0e-93 346.3 329 58.1
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.9e-93 345.5 383 53.0
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 2.2e-91 340.5 455 46.2
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 1.9e-87 327.4 429 46.2
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 3.5e-81 306.6 339 47.2
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.6e-73 281.2 266 56.4
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 1.9e-71 274.2 455 37.1
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 4.1e-69 266.5 214 72.4
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 1.0e-67 261.9 196 66.3
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 3.8e-67 260.0 320 45.9
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.4e-61 241.5 427 38.6
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 2.4e-61 240.7 135 89.6
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 1.4e-56 224.9 372 40.1
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.7e-56 222.6 177 63.8
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.6e-52 211.5 364 36.5
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 4.5e-52 209.9 539 30.2
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 4.7e-41 173.3 131 64.9
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 4.7e-41 173.3 131 64.9
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 4.4e-39 166.8 140 59.3
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 5.2e-32 143.3 487 27.7
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.0e-27 129.0 193 39.9
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 1.2e-20 105.5 60 78.3
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 4.6e-20 103.6 114 51.8
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.2e-17 93.2 57 73.7
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 1.8e-16 91.7 61 70.5
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 1.8e-16 91.7 61 70.5
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 6.8e-16 89.7 52 75.0
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 1.2e-15 89.0 65 58.5
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 2.6e-15 87.8 47 74.5
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 4.4e-15 87.0 64 64.1
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 3.0e-11 74.3 141 33.3


User provided reference genes

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