Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G087400 Phaseolus vulgaris HOM05D002996 ORTHO05D003536 7.3e-33 143.3 71 100.0
Phvul.001G231700 Phaseolus vulgaris HOM05D002996 ORTHO05D003536 7.8e-11 70.1 38 94.7
VMungo1383G2581 Vigna mungo HOM05D002996 ORTHO05D003536 1.0e-10 69.7 38 94.7
Glyma.11G218000 Glycine max HOM05D002996 ORTHO05D003536 2.3e-10 68.6 38 92.1
Glyma.18G039000 Glycine max HOM05D002996 ORTHO05D003536 1.1e-09 66.2 38 89.5
Medtr3g067690 Medicago truncatula HOM05D002996 ORTHO05D003536 1.5e-09 65.9 38 86.8
Lalb_Chr15g0084771 Lupinus albus HOM05D002996 ORTHO05D003536 1.9e-09 65.5 38 84.2
Medtr3g067695 Medicago truncatula HOM05D002996 ORTHO05D003536 1.9e-09 65.5 38 86.8
arahy.Tifrunner.gnm1.ann1.RDL55E Arachis hypogaea HOM05D002996 ORTHO05D003536 3.3e-09 64.7 40 82.5
Ca_08163_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 9.5e-09 63.2 38 81.6
Ca_17109_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 9.5e-09 63.2 38 81.6
Psat5g122480 Pisum sativum HOM05D002996 ORTHO05D003536 2.1e-08 62.0 38 81.6
TPR.G1005 Trifolium pratense HOM05D002996 ORTHO05D003536 3.6e-08 61.2 38 76.3
Ciclev10010941m.g Citrus clementina HOM05D002996 ORTHO05D003536 6.2e-08 60.5 47 68.1
CiPaw.03G068800 Carya illinoinensis HOM05D002996 ORTHO05D003536 1.1e-07 59.7 38 78.9
TPR.G27148 Trifolium pratense HOM05D002996 ORTHO05D003536 1.1e-07 59.7 38 78.9
Lj6g0006116 Lotus japonicus HOM05D002996 ORTHO05D003536 1.4e-07 59.3 38 78.9
Atru.chr1.1814 Acer truncatum HOM05D002996 ORTHO05D003536 1.8e-07 58.9 38 78.9
CSS0002683 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 1.8e-07 58.9 38 78.9
HanXRQChr09g0262271 Helianthus annuus HOM05D002996 ORTHO05D003536 3.1e-07 58.2 37 75.7
Thecc.04G120500 Theobroma cacao HOM05D002996 ORTHO05D003536 4.0e-07 57.8 38 78.9
Cfa007838 Carpinus fangiana HOM05D002996 ORTHO05D003536 5.2e-07 57.4 38 73.7
Haze_14227 Corylus avellana HOM05D002996 ORTHO05D003536 5.2e-07 57.4 38 73.7
CAN.G11.11 Capsicum annuum HOM05D002996 ORTHO05D003536 6.8e-07 57.0 38 73.7
MD17G1256700 Malus domestica HOM05D002996 ORTHO05D003536 6.8e-07 57.0 38 76.3
Solyc02g091410.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 6.8e-07 57.0 38 73.7
Sopen02g036030 Solanum pennellii HOM05D002996 ORTHO05D003536 6.8e-07 57.0 38 73.7
CAN.G625.86 Capsicum annuum HOM05D002996 ORTHO05D003536 8.9e-07 56.6 38 73.7
Peaxi162Scf00003g00013 Petunia axillaris HOM05D002996 ORTHO05D003536 8.9e-07 56.6 38 73.7
QL11p004079 Quercus lobata HOM05D002996 ORTHO05D003536 8.9e-07 56.6 38 71.1
RcHm_v2.0_Chr7g0220101 Rosa chinensis HOM05D002996 ORTHO05D003536 8.9e-07 56.6 38 73.7
AUR62023190 Chenopodium quinoa HOM05D002996 ORTHO05D003536 1.2e-06 56.2 38 73.7
AUR62023237 Chenopodium quinoa HOM05D002996 ORTHO05D003536 1.2e-06 56.2 38 71.1
Solyc03g043660.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 1.2e-06 56.2 38 71.1
GSVIVG01030858001 Vitis vinifera HOM05D002996 ORTHO05D003536 1.2e-06 56.2 38 76.3
Dinv14879 Davidia involucrata HOM05D002996 ORTHO05D003536 1.5e-06 55.8 38 73.7
MBI16_g14303_MAGBIO Magnolia biondii HOM05D002996 ORTHO05D003536 1.5e-06 55.8 40 70.0
ECA232G3169 Erigeron canadensis HOM05D002996 ORTHO05D003536 2.0e-06 55.5 37 70.3
FAN18G1791 Fragaria x ananassa HOM05D002996 ORTHO05D003536 2.0e-06 55.5 38 71.1
Potri.004G088600 Populus trichocarpa HOM05D002996 ORTHO05D003536 2.0e-06 55.5 38 73.7
TPR.G27497 Trifolium pratense HOM05D002996 ORTHO05D003536 2.0e-06 55.5 38 71.1
vmacro05507 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 2.0e-06 55.5 58 55.2
Gohir.A11G162100 Gossypium hirsutum HOM05D002996 ORTHO05D003536 2.6e-06 55.1 38 71.1
Gohir.D11G168300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 2.6e-06 55.1 38 71.1
Gorai.007G179800 Gossypium raimondii HOM05D002996 ORTHO05D003536 2.6e-06 55.1 38 71.1
Rhsim10G0079400 Rhododendron simsii HOM05D002996 ORTHO05D003536 2.6e-06 55.1 38 73.7
Sed0026936 Sechium edule HOM05D002996 ORTHO05D003536 2.6e-06 55.1 38 68.4
Ah.16g101290 Amaranthus hybridus HOM05D002996 ORTHO05D003536 3.4e-06 54.7 38 65.8
Duzib133G0038 Durio zibethinus HOM05D002996 ORTHO05D003536 3.4e-06 54.7 38 73.7
Manes.02G074800 Manihot esculenta HOM05D002996 ORTHO05D003536 3.4e-06 54.7 38 73.7
Nn4g24147 Nelumbo nucifera HOM05D002996 ORTHO05D003536 3.4e-06 54.7 38 73.7
Nitab4.5_0003360g0070 Nicotiana tabacum HOM05D002996 ORTHO05D003536 3.4e-06 54.7 38 71.1
Nitab4.5_0004399g0040 Nicotiana tabacum HOM05D002996 ORTHO05D003536 3.4e-06 54.7 38 71.1
Rhsim08G0086100 Rhododendron simsii HOM05D002996 ORTHO05D003536 3.4e-06 54.7 38 73.7
Rhsim10G0079500 Rhododendron simsii HOM05D002996 ORTHO05D003536 3.4e-06 54.7 61 52.5
Sabra04G0059000 Salix brachista HOM05D002996 ORTHO05D003536 3.4e-06 54.7 38 71.1
Actinidia17659 Actinidia chinensis HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 71.1
Manes.01G115900 Manihot esculenta HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 73.7
Manes.01G116000 Manihot esculenta HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 68.4
Nitab4.5_0000465g0030 Nicotiana tabacum HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 71.1
Nitab4.5_0002366g0050 Nicotiana tabacum HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 71.1
Potri.017G128300 Populus trichocarpa HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 71.1
Sabra17G0107000 Salix brachista HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 71.1
Sopen03g007520 Solanum pennellii HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 68.4
vmacro18050 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 4.4e-06 54.3 38 73.7
Gohir.A08G052700 Gossypium hirsutum HOM05D002996 ORTHO05D003536 5.8e-06 53.9 38 71.1
Gohir.D08G062300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 5.8e-06 53.9 38 71.1
Gorai.004G064500 Gossypium raimondii HOM05D002996 ORTHO05D003536 5.8e-06 53.9 38 71.1
Prupe.3G159400 Prunus persica HOM05D002996 ORTHO05D003536 5.8e-06 53.9 38 71.1
EL10Ac2g04480 Beta vulgaris HOM05D002996 ORTHO05D003536 7.6e-06 53.5 38 71.1
CANSAT78G2389 Cannabis sativa HOM05D002996 ORTHO05D003536 7.6e-06 53.5 38 68.4
ClCG05G010970 Citrullus lanatus HOM05D002996 ORTHO05D003536 7.6e-06 53.5 38 68.4
Peaxi162Scf00118g00223 Petunia axillaris HOM05D002996 ORTHO05D003536 7.6e-06 53.5 38 65.8
Hund16206 Selenicereus undatus HOM05D002996 ORTHO05D003536 7.6e-06 53.5 38 71.1
Duzib211G0161 Durio zibethinus HOM05D002996 ORTHO05D003536 9.9e-06 53.1 38 71.1
FvH4_5g27890 Fragaria vesca HOM05D002996 ORTHO05D003536 9.9e-06 53.1 38 68.4
PSO478G4946 Papaver somniferum HOM05D002996 ORTHO05D003536 9.9e-06 53.1 38 68.4


User provided reference genes

Program Settings