Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 3.4e-116 421.8 225 100.0
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 2.8e-94 349.0 217 83.9
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 1.9e-87 326.2 216 82.4
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 3.3e-79 298.9 225 70.2
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 9.9e-76 287.3 213 70.4
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 3.5e-73 278.9 214 69.6
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 1.4e-69 266.9 212 66.0
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 8.9e-69 264.2 211 65.9
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 2.2e-59 233.0 213 57.3
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 3.2e-58 229.2 217 56.7
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 4.2e-58 228.8 210 59.5
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.2e-57 227.3 217 56.2
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.6e-57 226.9 216 55.1
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 2.1e-57 226.5 214 57.9
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 3.5e-57 225.7 209 57.9
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.0e-56 224.2 217 55.3
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 1.7e-56 223.4 213 58.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 2.3e-56 223.0 218 54.6
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 2.3e-56 223.0 217 56.7
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 2.5e-55 219.5 212 54.7
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 2.5e-55 219.5 216 51.4
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 5.6e-55 218.4 209 54.1
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 3.6e-54 215.7 218 57.8
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 4.8e-54 215.3 222 56.3
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.4e-53 213.8 217 55.3
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 5.8e-52 208.4 220 54.1
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 7.6e-52 208.0 223 52.0
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.9e-51 206.1 223 51.6
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.4e-50 203.0 215 53.5
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 2.4e-50 203.0 221 53.4
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 9.3e-50 201.1 209 50.7
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 2.1e-49 199.9 190 54.2
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.3e-48 197.2 225 49.3
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.3e-48 197.2 181 54.7
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.5e-47 193.7 213 51.6
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.6e-47 191.8 217 51.2
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 9.6e-47 191.0 209 50.2
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 8.1e-46 188.0 224 48.7
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 9.0e-45 184.5 214 49.5
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 2.6e-44 183.0 219 48.9
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 2.6e-44 183.0 219 48.9
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 5.8e-44 181.8 229 47.2
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 3.8e-43 179.1 224 46.9
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.9e-42 176.8 215 47.4
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.9e-42 176.8 206 48.5
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 1.9e-42 176.8 217 47.9
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.9e-42 176.8 193 48.7
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 3.2e-42 176.0 216 47.2
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 4.2e-42 175.6 217 47.5
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 7.1e-42 174.9 206 47.6
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 9.3e-42 174.5 219 45.7
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 1.2e-41 174.1 219 45.7
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 3.5e-41 172.6 164 57.3
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.8e-40 170.2 218 47.7
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 2.3e-40 169.9 217 46.5
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 1.3e-38 164.1 143 60.8
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 1.4e-37 160.6 172 50.6
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 2.6e-36 156.4 164 52.4
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 4.5e-36 155.6 170 53.5
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.2e-34 149.1 194 43.3
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 3.9e-32 142.5 174 46.0
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.3e-30 137.5 124 55.6
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 3.4e-28 129.4 228 35.1
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 9.4e-26 121.3 160 48.1
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.2e-22 110.2 220 35.0
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 6.3e-22 108.6 120 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.2e-20 104.4 197 33.0
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 2.6e-20 103.2 98 55.1
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.1e-18 97.8 184 34.2
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.9e-18 97.1 209 32.1
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.9e-18 97.1 209 32.1
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 7.9e-17 91.7 189 34.4
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 7.4e-15 85.1 119 39.5
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 1.1e-13 81.3 93 45.2
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.4e-13 80.9 63 63.5
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.4e-13 80.9 64 65.6
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.8e-13 80.5 96 45.8
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 4.5e-12 75.9 52 75.0
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 6.1e-09 65.5 119 32.8
Cfa009906 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.2e-06 57.0 72 56.9


User provided reference genes

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