Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 7.8e-107 390.6 213 100.0
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 3.1e-95 352.1 214 91.6
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 3.2e-84 315.5 216 84.7
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 1.6e-80 303.1 211 82.0
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 2.8e-64 249.2 217 67.3
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 4.1e-63 245.4 212 70.3
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.9e-60 236.5 199 70.9
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.9e-60 236.5 199 70.9
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 1.8e-58 229.9 217 66.8
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 3.1e-39 166.0 235 53.6
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 1.3e-37 160.6 214 53.3
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 2.1e-35 153.3 218 52.8
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 2.0e-33 146.7 216 50.9
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 2.0e-33 146.7 217 52.1
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 4.4e-33 145.6 157 58.0
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 4.9e-32 142.1 178 51.1
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 6.3e-32 141.7 193 52.8
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 6.3e-32 141.7 193 52.8
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 5.4e-31 138.7 180 50.0
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 1.6e-30 137.1 199 47.7
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 1.7e-29 133.7 194 46.9
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 2.9e-29 132.9 201 49.3
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 3.8e-29 132.5 181 52.5
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 5.0e-29 132.1 207 45.4
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 6.6e-29 131.7 201 46.8
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 6.6e-29 131.7 211 45.0
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 4.3e-28 129.0 163 49.7
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 5.6e-28 128.6 184 48.9
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 5.6e-28 128.6 186 48.9
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 9.5e-28 127.9 190 45.3
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 4.7e-27 125.6 191 44.5
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 4.7e-27 125.6 191 44.5
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 8.0e-27 124.8 185 44.9
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.8e-26 123.6 206 42.2
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 2.3e-26 123.2 183 48.1
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 3.0e-26 122.9 177 45.2
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 6.8e-26 121.7 180 49.4
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 3.4e-25 119.4 157 49.0
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 1.3e-24 117.5 189 46.0
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 1.7e-24 117.1 200 46.0
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 2.9e-24 116.3 154 48.7
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 2.9e-24 116.3 208 42.8
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 3.7e-24 115.9 164 47.0
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 1.1e-23 114.4 191 44.0
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 1.8e-23 113.6 151 49.7
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 2.4e-23 113.2 216 40.3
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 3.2e-23 112.8 216 40.3
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 9.2e-23 111.3 183 43.7
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 9.2e-23 111.3 171 43.3
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 2.7e-22 109.8 187 43.3
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 4.6e-22 109.0 169 43.8
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 4.6e-22 109.0 114 56.1
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 1.0e-21 107.8 205 41.0
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.0e-21 107.8 205 41.0
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 1.0e-21 107.8 206 43.2
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.7e-21 107.1 203 40.9
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 3.0e-21 106.3 127 46.5
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 5.0e-21 105.5 203 41.9
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 1.5e-20 104.0 183 42.6
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 1.9e-20 103.6 156 46.2
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 4.3e-20 102.4 173 41.0
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 4.3e-20 102.4 160 45.6
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 4.3e-20 102.4 153 45.1
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 9.5e-20 101.3 134 46.3
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 9.5e-20 101.3 145 49.7
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 1.2e-19 100.9 167 44.9
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 2.1e-19 100.1 160 46.2
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 2.8e-19 99.8 149 44.3
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 3.6e-19 99.4 168 43.5
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 3.6e-19 99.4 181 40.9
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 4.7e-19 99.0 196 40.3
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 4.7e-19 99.0 185 43.8
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 8.0e-19 98.2 91 56.0
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 1.0e-18 97.8 161 45.3
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 3.1e-18 96.3 182 40.7
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 4.0e-18 95.9 186 40.3
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 4.0e-18 95.9 104 54.8
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 4.0e-18 95.9 160 45.0
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 5.2e-18 95.5 171 38.6
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 5.2e-18 95.5 140 48.6
Glyma.19G150200 Glycine max HOM05D006969 ORTHO05D008826 6.8e-18 95.1 99 59.6
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 1.2e-17 94.4 168 44.6
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 1.2e-17 94.4 104 53.8
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 2.0e-17 93.6 177 39.0
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 3.4e-17 92.8 102 53.9
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 4.4e-17 92.4 200 38.5
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 4.4e-17 92.4 179 39.7
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 4.4e-17 92.4 179 39.7
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 5.8e-17 92.0 176 38.6
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 7.5e-17 91.7 176 39.2
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 7.5e-17 91.7 171 40.9
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 9.8e-17 91.3 157 43.9
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 4.9e-16 89.0 137 44.5
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 6.4e-16 88.6 143 42.7
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 1.1e-15 87.8 203 36.5
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 2.4e-15 86.7 137 45.3
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 5.4e-15 85.5 69 68.1
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 9.2e-15 84.7 111 47.7
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 1.2e-14 84.3 125 44.8
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 1.6e-14 84.0 138 44.2
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 1.6e-14 84.0 164 40.2
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 1.6e-14 84.0 168 39.3
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 2.7e-14 83.2 149 40.3
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 4.6e-14 82.4 163 39.3
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 1.3e-13 80.9 120 46.7
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 3.0e-13 79.7 162 34.6
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 3.9e-13 79.3 160 36.9
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 7.3e-12 75.1 127 40.2
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 9.5e-12 74.7 164 34.1
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 1.6e-11 73.9 129 39.5
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 2.1e-11 73.6 97 46.4
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 8.1e-11 71.6 87 52.9
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.8e-10 70.5 88 45.5
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 6.8e-10 68.6 90 44.4
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.7e-08 62.8 85 50.6
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 4.9e-08 62.4 85 51.8


User provided reference genes

Program Settings