Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 4.1e-122 443.0 660 100.0
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 1.6e-70 271.6 207 87.4
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 1.2e-57 228.8 209 64.1
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 1.2e-52 212.2 211 62.1
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 7.0e-45 186.4 203 53.2
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 1.7e-43 181.8 163 63.2
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 1.2e-41 175.6 163 62.0
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 3.2e-34 151.0 204 48.0
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 5.2e-32 143.7 266 40.6
VMungo1383G1674 Vigna mungo HOM05D023663 ORTHO05D011835 6.7e-32 143.3 161 83.2
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 2.0e-31 141.7 205 48.8
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 1.3e-30 139.0 165 56.4
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 2.9e-19 101.3 154 45.5
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 5.0e-19 100.5 155 43.9
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 6.6e-19 100.1 153 43.1
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 8.6e-19 99.8 157 45.9
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 8.6e-19 99.8 155 43.2
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 3.3e-18 97.8 156 46.8
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 3.3e-18 97.8 165 43.0
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 7.2e-18 96.7 157 43.3
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 7.2e-18 96.7 151 44.4
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 9.5e-18 96.3 157 44.6
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 1.6e-17 95.5 154 42.2
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 2.8e-17 94.7 168 43.5
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 3.6e-17 94.4 182 38.5
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 3.6e-17 94.4 158 42.4
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 4.7e-17 94.0 194 38.7
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 4.7e-17 94.0 165 41.8
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 8.0e-17 93.2 177 41.8
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.0e-16 92.8 157 43.9
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 1.4e-16 92.4 160 41.9
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 1.4e-16 92.4 161 38.5
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 1.8e-16 92.0 199 36.7
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 2.3e-16 91.7 208 37.5
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 3.0e-16 91.3 160 40.6
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 3.0e-16 91.3 191 40.8
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 3.0e-16 91.3 185 39.5
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 4.0e-16 90.9 162 40.1
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 5.2e-16 90.5 177 41.2
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 5.2e-16 90.5 169 39.1
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 8.9e-16 89.7 174 39.7
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 1.2e-15 89.4 163 40.5
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.5e-15 89.0 173 41.0
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 1.5e-15 89.0 189 38.6
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 2.0e-15 88.6 221 36.7
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 2.0e-15 88.6 189 39.2
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 2.6e-15 88.2 182 39.0
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 2.6e-15 88.2 162 40.1
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 4.4e-15 87.4 174 39.7
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 5.7e-15 87.0 157 40.8
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 9.8e-15 86.3 155 41.3
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 1.3e-14 85.9 165 38.8
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 3.7e-14 84.3 173 36.4
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.7e-14 84.3 173 36.4
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 6.3e-14 83.6 190 37.4
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 8.3e-14 83.2 90 50.0
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 2.4e-13 81.6 161 39.8
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 2.4e-13 81.6 164 39.0
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 2.4e-13 81.6 158 41.1
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 2.4e-13 81.6 171 35.7
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 2.4e-13 81.6 167 40.1
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 5.4e-13 80.5 166 38.6
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 7.0e-13 80.1 169 33.7
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 2.0e-12 78.6 101 48.5
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.0e-12 78.6 182 36.8
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 2.0e-12 78.6 169 36.1
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 7.8e-12 76.6 164 37.8
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 1.0e-11 76.3 169 37.3
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 1.3e-11 75.9 166 39.8
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.7e-11 75.5 177 40.1
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 2.3e-11 75.1 162 41.4
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 5.0e-11 73.9 176 36.4
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 6.6e-11 73.6 100 54.0
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 6.6e-11 73.6 100 54.0
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 8.6e-11 73.2 171 38.0
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 1.1e-10 72.8 173 38.7
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 2.5e-10 71.6 169 33.7
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.2e-09 69.3 171 34.5
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.6e-09 68.9 173 34.7
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 2.8e-09 68.2 153 34.0
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 6.1e-09 67.0 172 32.0
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 8.0e-09 66.6 159 35.2
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 1.0e-08 66.2 153 35.3
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 1.4e-08 65.9 149 38.9
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 1.4e-08 65.9 66 59.1
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 1.8e-08 65.5 153 34.0
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 1.8e-08 65.5 153 36.6
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 1.8e-08 65.5 125 36.8
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 3.1e-08 64.7 160 34.4
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 5.2e-08 63.9 157 34.4
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 5.2e-08 63.9 157 34.4
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 6.8e-08 63.5 156 34.6
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 1.5e-07 62.4 154 33.1
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 2.0e-07 62.0 154 33.1
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 2.6e-07 61.6 179 35.2
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 5.8e-07 60.5 153 31.4
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 7.5e-07 60.1 152 36.2
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 1.7e-06 58.9 114 38.6
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 1.7e-06 58.9 62 51.6
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 2.2e-06 58.5 61 52.5
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 2.2e-06 58.5 156 32.7
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 2.9e-06 58.2 154 35.7
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 4.9e-06 57.4 59 54.2
Psat3g117960 Pisum sativum HOM05D006830 ORTHO05D008119 6.4e-06 57.0 51 68.6


User provided reference genes

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