Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 1.3e-31 139.0 65 100.0
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 1.7e-28 128.6 65 92.3
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 8.4e-28 126.3 65 89.2
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 4.2e-27 124.0 65 89.2
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 1.0e-25 119.4 64 84.4
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.3e-25 119.0 68 85.3
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.3e-25 119.0 68 85.3
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 1.3e-25 119.0 68 85.3
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 3.0e-25 117.9 68 83.8
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 3.0e-25 117.9 67 83.6
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 3.9e-25 117.5 62 87.1
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 8.7e-25 116.3 61 85.2
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 8.7e-25 116.3 64 82.8
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 1.1e-24 115.9 64 81.2
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 1.1e-24 115.9 64 81.2
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 1.1e-24 115.9 60 86.7
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.1e-24 115.9 60 86.7
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.1e-24 115.9 64 81.2
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 1.5e-24 115.5 62 83.9
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 1.9e-24 115.2 64 78.1
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 1.9e-24 115.2 62 82.3
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 1.9e-24 115.2 62 82.3
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 1.9e-24 115.2 64 78.1
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 2.5e-24 114.8 64 79.7
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 2.5e-24 114.8 63 82.5
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 3.3e-24 114.4 62 80.6
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 3.3e-24 114.4 62 80.6
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 4.3e-24 114.0 59 86.4
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 4.3e-24 114.0 62 77.4
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 4.3e-24 114.0 64 78.1
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 5.6e-24 113.6 62 80.6
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 7.4e-24 113.2 64 79.7
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.4e-24 113.2 65 80.0
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.4e-24 113.2 65 80.0
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.4e-24 113.2 65 80.0
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.4e-24 113.2 65 80.0
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 7.4e-24 113.2 65 80.0
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 7.4e-24 113.2 65 80.0
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 9.6e-24 112.8 64 76.6
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 1.6e-23 112.1 62 82.3
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 2.1e-23 111.7 67 80.6
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 2.1e-23 111.7 63 81.0
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 2.8e-23 111.3 58 84.5
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 2.8e-23 111.3 64 78.1
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 3.7e-23 110.9 63 77.8
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 3.7e-23 110.9 58 87.9
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 6.2e-23 110.2 62 79.0
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 6.2e-23 110.2 67 79.1
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 1.1e-22 109.4 63 76.2
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 1.1e-22 109.4 67 79.1
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 80.6
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 1.4e-22 109.0 60 81.7
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 77.4
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 1.8e-22 108.6 63 76.2
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 1.8e-22 108.6 63 77.8
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.8e-22 108.6 65 78.5
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.8e-22 108.6 65 78.5
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 5.3e-22 107.1 62 74.2
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 5.3e-22 107.1 58 82.8
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 9.0e-22 106.3 61 78.7
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.2e-21 105.9 63 73.0
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 1.2e-21 105.9 60 76.7
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 1.5e-21 105.5 62 74.2
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 1.5e-21 105.5 62 74.2
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 1.5e-21 105.5 62 74.2
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 1.5e-21 105.5 62 74.2
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 1.5e-21 105.5 62 74.2
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 2.0e-21 105.1 64 71.9
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 2.0e-21 105.1 60 78.3
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 2.6e-21 104.8 62 72.6
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 3.4e-21 104.4 62 72.6
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 3.4e-21 104.4 62 72.6
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 3.4e-21 104.4 62 72.6
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 3.4e-21 104.4 62 72.6
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 3.4e-21 104.4 62 72.6
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 3.4e-21 104.4 62 72.6
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 3.4e-21 104.4 62 72.6
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 3.4e-21 104.4 61 73.8
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 3.4e-21 104.4 62 72.6
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 5.8e-21 103.6 64 75.0
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 1.0e-20 102.8 55 81.8
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.0e-20 102.8 57 77.2
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.3e-20 102.4 61 75.4
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 2.2e-20 101.7 61 70.5
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 2.2e-20 101.7 54 85.2
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 2.9e-20 101.3 60 75.0
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 3.8e-20 100.9 60 71.7
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 3.2e-19 97.8 62 71.0
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 2.1e-18 95.1 63 71.4
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.5e-16 89.0 64 59.4
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 6.3e-15 83.6 62 67.7
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.1e-14 82.8 59 66.1
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 3.1e-14 81.3 47 74.5
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 4.1e-14 80.9 44 77.3
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 5.3e-14 80.5 62 66.1
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 1.1e-11 72.8 38 84.2
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.1e-10 68.6 36 77.8
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.7e-10 68.2 36 77.8
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.7e-10 68.2 36 77.8
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 7.9e-10 66.6 61 50.8
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 7.9e-10 66.6 57 49.1
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 7.9e-10 66.6 57 49.1
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 1.0e-09 66.2 36 75.0
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 6.7e-09 63.5 36 72.2
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 3.3e-08 61.2 42 64.3
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 7.4e-08 60.1 55 47.3


User provided reference genes

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