Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 8.2e-70 266.9 133 100.0
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 7.4e-55 217.2 141 81.6
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 8.0e-41 170.6 143 66.4
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.6e-33 146.4 142 57.7
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 1.4e-29 133.3 142 57.0
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 5.9e-28 127.9 150 52.0
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 2.9e-27 125.6 146 50.0
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 3.2e-26 122.1 145 51.7
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 7.2e-26 120.9 158 50.0
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 9.4e-26 120.6 153 51.6
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 6.1e-25 117.9 155 50.3
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.3e-24 115.9 142 52.1
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.3e-24 115.9 142 52.1
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 5.2e-24 114.8 153 49.0
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 6.8e-24 114.4 145 50.3
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 8.8e-24 114.0 142 51.4
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 1.2e-23 113.6 149 50.3
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 2.6e-23 112.5 153 47.7
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 2.6e-23 112.5 164 48.2
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 2.6e-23 112.5 142 50.0
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 3.4e-23 112.1 142 48.6
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 4.4e-23 111.7 162 48.8
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 5.7e-23 111.3 148 49.3
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 7.5e-23 110.9 155 47.1
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 9.8e-23 110.5 154 50.0
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 9.8e-23 110.5 145 46.9
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 1.3e-22 110.2 163 46.6
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 2.2e-22 109.4 151 49.0
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.8e-22 108.2 144 50.7
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 8.3e-22 107.5 140 48.6
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.4e-21 106.7 154 49.4
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 3.1e-21 105.5 152 47.4
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 9.1e-21 104.0 153 47.7
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 1.6e-20 103.2 133 48.1
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 2.0e-20 102.8 148 46.6
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 2.0e-20 102.8 151 45.0
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 2.7e-20 102.4 162 45.1
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.7e-20 102.4 144 48.6
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 1.3e-19 100.1 157 45.9
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.7e-19 99.8 151 45.0
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 6.6e-19 97.8 157 43.9
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 6.6e-19 97.8 109 56.9
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 1.1e-18 97.1 160 41.9
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 2.5e-18 95.9 162 44.4
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 4.2e-18 95.1 140 44.3
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 7.2e-18 94.4 166 41.6
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 9.5e-18 94.0 156 42.9
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 6.1e-17 91.3 141 43.3
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 6.1e-17 91.3 147 40.1
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 8.0e-17 90.9 144 45.1
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.4e-16 90.1 147 39.5
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 3.0e-16 89.0 135 43.7
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.5e-15 86.7 145 38.6
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 9.8e-15 84.0 158 37.3
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 2.2e-14 82.8 145 37.9
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 6.3e-14 81.3 149 37.6
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 8.3e-14 80.9 145 41.4
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 8.3e-14 80.9 149 43.6
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 1.1e-13 80.5 139 41.7
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 5.4e-13 78.2 139 36.0
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 5.4e-13 78.2 139 38.8
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 7.0e-13 77.8 144 38.9
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 1.2e-12 77.0 140 39.3
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 7.8e-12 74.3 145 43.4
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.0e-11 73.9 137 39.4
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 1.3e-11 73.6 140 39.3
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 2.3e-11 72.8 139 36.0
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 2.9e-11 72.4 146 39.0
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 3.9e-11 72.0 131 42.7
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 1.1e-10 70.5 145 37.2
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 1.1e-10 70.5 145 37.2
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 1.1e-10 70.5 161 33.5
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 1.5e-10 70.1 144 38.2
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 1.5e-10 70.1 169 34.3
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 1.9e-10 69.7 144 38.2
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 1.9e-10 69.7 145 36.6
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 7.3e-10 67.8 140 37.1
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 1.6e-09 66.6 140 36.4
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.1e-09 66.2 152 35.5
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.0e-08 63.9 162 35.8
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 1.4e-08 63.5 176 33.5
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 1.8e-08 63.2 177 33.3
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 4.0e-08 62.0 176 33.5
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 1.2e-07 60.5 136 36.0
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 9.8e-07 57.4 141 34.0
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 3.7e-06 55.5 153 32.0
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 6.4e-06 54.7 133 33.1


User provided reference genes

Program Settings