Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G067900 Phaseolus vulgaris HOM05D006065 ORTHO05D007672 1.3e-64 249.6 131 100.0
VMungo1383G0981 Vigna mungo HOM05D006065 ORTHO05D007672 5.8e-60 234.2 134 92.5
Glyma.18G230000 Glycine max HOM05D006065 ORTHO05D007672 3.5e-49 198.4 134 76.9
Glyma.09G262200 Glycine max HOM05D006065 ORTHO05D007672 3.0e-48 195.3 135 78.5
Lj1g0009386 Lotus japonicus HOM05D006065 ORTHO05D007672 2.9e-43 178.7 138 71.0
Ca_07890_v3 Cicer arietinum L. HOM05D006065 ORTHO05D007672 9.6e-39 163.7 144 63.2
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea HOM05D006065 ORTHO05D007672 2.8e-38 162.2 146 61.6
Medtr7g076690 Medicago truncatula HOM05D006065 ORTHO05D007672 1.4e-37 159.8 143 61.5
TPR.G37820 Trifolium pratense HOM05D006065 ORTHO05D007672 3.4e-36 155.2 131 63.4
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea HOM05D006065 ORTHO05D007672 3.2e-34 148.7 182 49.5
Lalb_Chr19g0127061 Lupinus albus HOM05D006065 ORTHO05D007672 1.5e-31 139.8 141 54.6
Psat3g110920 Pisum sativum HOM05D006065 ORTHO05D007672 4.9e-27 124.8 138 54.3
QL08p049008 Quercus lobata HOM05D006065 ORTHO05D007672 1.2e-25 120.2 133 52.6
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 2.1e-25 119.4 133 51.9
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 2.1e-25 119.4 150 47.3
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 3.5e-25 118.6 140 50.0
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 1.3e-24 116.7 127 50.4
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 3.9e-24 115.2 135 48.1
MBI18_g21561_MAGBIO Magnolia biondii HOM05D006065 ORTHO05D007672 5.1e-24 114.8 147 48.3
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 6.7e-24 114.4 134 47.8
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 1.1e-23 113.6 129 49.6
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 1.5e-23 113.2 129 48.1
vmacro13279 Vaccinium macrocarpon HOM05D006065 ORTHO05D007672 1.9e-23 112.8 150 48.0
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 3.3e-23 112.1 152 46.1
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 1.6e-22 109.8 134 46.3
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 1.6e-22 109.8 133 48.9
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 1.6e-22 109.8 128 49.2
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 2.1e-22 109.4 129 49.6
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 2.8e-22 109.0 147 46.3
ClCG05G001580 Citrullus lanatus HOM05D006065 ORTHO05D007672 4.8e-22 108.2 137 47.4
HanXRQChr13g0426531 Helianthus annuus HOM05D006065 ORTHO05D007672 4.8e-22 108.2 131 43.5
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 6.2e-22 107.8 131 48.9
TWI59G0879 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 6.2e-22 107.8 130 50.0
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 8.1e-22 107.5 144 42.4
CsaV3_3G008970 Cucumis sativus L. HOM05D006065 ORTHO05D007672 1.1e-21 107.1 139 46.0
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 1.4e-21 106.7 135 45.9
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 4.0e-21 105.1 129 45.7
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 5.3e-21 104.8 141 48.2
Haze_15490 Corylus avellana HOM05D006065 ORTHO05D007672 5.3e-21 104.8 189 40.7
MSTRG.4858 Avicennia marina HOM05D006065 ORTHO05D007672 9.0e-21 104.0 145 41.4
SalBow3G2602 Salvia bowleyana HOM05D006065 ORTHO05D007672 9.0e-21 104.0 128 45.3
Sc01g0003370 Simmondsia chinensis HOM05D006065 ORTHO05D007672 9.0e-21 104.0 134 49.3
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 1.2e-20 103.6 127 47.2
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 2.0e-20 102.8 154 42.2
Gohir.D08G152500 Gossypium hirsutum HOM05D006065 ORTHO05D007672 2.0e-20 102.8 129 44.2
Sed0025321 Sechium edule HOM05D006065 ORTHO05D007672 2.0e-20 102.8 140 45.0
SGA_v2.0_scaffold11G05664 Striga asiatica HOM05D006065 ORTHO05D007672 2.0e-20 102.8 148 43.9
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 3.4e-20 102.1 144 45.8
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 3.4e-20 102.1 144 43.1
CiPaw.02G030100 Carya illinoinensis HOM05D006065 ORTHO05D007672 4.5e-20 101.7 116 51.7
Gorai.004G158400 Gossypium raimondii HOM05D006065 ORTHO05D007672 5.8e-20 101.3 129 44.2
Gorai.007G098900 Gossypium raimondii HOM05D006065 ORTHO05D007672 1.0e-19 100.5 125 45.6
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 1.7e-19 99.8 140 41.4
Cc02_g37900 Coffea canephora HOM05D006065 ORTHO05D007672 2.9e-19 99.0 125 44.8
Duzib133G1075 Durio zibethinus HOM05D006065 ORTHO05D007672 2.9e-19 99.0 130 47.7
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla HOM05D006065 ORTHO05D007672 4.9e-19 98.2 164 41.5
TAR374G1295 Trochodendron aralioides HOM05D006065 ORTHO05D007672 4.9e-19 98.2 134 42.5
Prupe.2G168300 Prunus persica HOM05D006065 ORTHO05D007672 1.9e-18 96.3 130 43.1
Manes.01G258100 Manihot esculenta HOM05D006065 ORTHO05D007672 2.5e-18 95.9 129 45.7
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 5.5e-18 94.7 139 41.0
Lsat_1_v5_gn_7_4500 Lactuca sativa HOM05D006065 ORTHO05D007672 7.1e-18 94.4 126 43.7
unitig_8.g3395 Utricularia gibba HOM05D006065 ORTHO05D007672 7.1e-18 94.4 147 39.5
Aa31LG5G450 Aethionema arabicum HOM05D006065 ORTHO05D007672 1.2e-17 93.6 146 40.4
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 1.2e-17 93.6 116 44.0
Aqoxy7G00322 Aquilegia oxysepala HOM05D006065 ORTHO05D007672 1.6e-17 93.2 153 41.8
PSO832G3783 Papaver somniferum HOM05D006065 ORTHO05D007672 2.1e-17 92.8 143 39.9
THA.LOC104817023 Tarenaya hassleriana HOM05D006065 ORTHO05D007672 2.1e-17 92.8 122 43.4
SGA_v2.0_scaffold43G16421 Striga asiatica HOM05D006065 ORTHO05D007672 2.7e-17 92.4 146 43.2
FAN03G2883 Fragaria x ananassa HOM05D006065 ORTHO05D007672 3.5e-17 92.0 134 44.0
FvH4_7g14190 Fragaria vesca HOM05D006065 ORTHO05D007672 7.9e-17 90.9 137 42.3
FAN01G0390 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.8e-16 89.7 137 42.3
FAN06G3027 Fragaria x ananassa HOM05D006065 ORTHO05D007672 2.3e-16 89.4 137 41.6
Sopen01g038320 Solanum pennellii HOM05D006065 ORTHO05D007672 2.3e-16 89.4 129 43.4
PGSC0003DMG400000036 Solanum tuberosum HOM05D006065 ORTHO05D007672 2.3e-16 89.4 138 40.6
FAN06G3847 Fragaria x ananassa HOM05D006065 ORTHO05D007672 3.0e-16 89.0 137 41.6
TWI14G0791 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 3.9e-16 88.6 137 40.1
Gohir.A11G088300 Gossypium hirsutum HOM05D006065 ORTHO05D007672 5.1e-16 88.2 128 40.6
PSO210G7571 Papaver somniferum HOM05D006065 ORTHO05D007672 5.1e-16 88.2 143 39.2
FAN10G0270 Fragaria x ananassa HOM05D006065 ORTHO05D007672 6.7e-16 87.8 137 43.1
RcHm_v2.0_Chr1g0355101 Rosa chinensis HOM05D006065 ORTHO05D007672 6.7e-16 87.8 127 41.7
GSVIVG01026900001 Vitis vinifera HOM05D006065 ORTHO05D007672 6.7e-16 87.8 116 42.2
AT4G00525 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 1.9e-15 86.3 124 41.1
Thhalv10029047m.g Eutrema salsugineum HOM05D006065 ORTHO05D007672 1.9e-15 86.3 127 39.4
Gohir.D11G092600 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.9e-15 86.3 125 40.8
BcaC01g06870 Brassica carinata HOM05D006065 ORTHO05D007672 2.5e-15 85.9 131 36.6
BcaNung05355 Brassica carinata HOM05D006065 ORTHO05D007672 2.5e-15 85.9 131 36.6
BolC3t16187H Brassica oleracea HOM05D006065 ORTHO05D007672 2.5e-15 85.9 131 36.6
Ah.05g180670 Amaranthus hybridus HOM05D006065 ORTHO05D007672 9.6e-15 84.0 124 41.9
CAN.G78.55 Capsicum annuum HOM05D006065 ORTHO05D007672 9.6e-15 84.0 146 39.0
Sed0021596 Sechium edule HOM05D006065 ORTHO05D007672 1.3e-14 83.6 135 43.0
Sp6g00560 Schrenkiella parvula HOM05D006065 ORTHO05D007672 3.7e-14 82.0 127 41.7
A03p32140 Brassica napus HOM05D006065 ORTHO05D007672 6.3e-14 81.3 134 35.1
BraA03t12384Z Brassica rapa HOM05D006065 ORTHO05D007672 6.3e-14 81.3 134 35.1
Carub.0006s3674 Capsella rubella HOM05D006065 ORTHO05D007672 1.1e-13 80.5 138 38.4
PGSC0003DMG400021646 Solanum tuberosum HOM05D006065 ORTHO05D007672 1.1e-13 80.5 114 43.0
Peaxi162Scf00020g00240 Petunia axillaris HOM05D006065 ORTHO05D007672 1.8e-13 79.7 115 40.9
EL10Ac1g00426 Beta vulgaris HOM05D006065 ORTHO05D007672 6.9e-13 77.8 109 45.0
Nitab4.5_0001702g0100 Nicotiana tabacum HOM05D006065 ORTHO05D007672 1.2e-12 77.0 118 42.4
CDE06G0574 Ceratophyllum demersum HOM05D006065 ORTHO05D007672 1.5e-12 76.6 118 39.0
Rhsim07G0016100 Rhododendron simsii HOM05D006065 ORTHO05D007672 4.5e-12 75.1 219 30.1
Solyc05g049940.3 Solanum lycopersicum HOM05D006065 ORTHO05D007672 7.6e-12 74.3 113 39.8
Sopen05g028300 Solanum pennellii HOM05D006065 ORTHO05D007672 2.2e-11 72.8 113 39.8
Eucgr.D02286 Eucalyptus grandis HOM05D006065 ORTHO05D007672 6.5e-11 71.2 123 35.0
HPP92_008504 Vanilla planifolia HOM05D006065 ORTHO05D007672 1.1e-10 70.5 122 33.6
Nitab4.5_0008002g0050 Nicotiana tabacum HOM05D006065 ORTHO05D007672 1.4e-10 70.1 124 36.3
Oeu020560.2 Olea europaea HOM05D006065 ORTHO05D007672 2.5e-10 69.3 204 30.4
AL6G52950 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 3.2e-10 68.9 126 37.3
MD07G1138600 Malus domestica HOM05D006065 ORTHO05D007672 3.2e-10 68.9 114 36.8
AT1G01715 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 2.1e-09 66.2 135 30.4
Nitab4.5_0005277g0010 Nicotiana tabacum HOM05D006065 ORTHO05D007672 2.7e-09 65.9 152 34.2
SEGI_06767 Sequoiadendron giganteum HOM05D006065 ORTHO05D007672 2.7e-09 65.9 122 32.8
CDE02G4271 Ceratophyllum demersum HOM05D000667 ORTHO05D009057 6.7e-08 61.2 72 48.6
Nn1g01520 Nelumbo nucifera HOM05D006065 ORTHO05D007672 8.7e-08 60.8 123 37.4
AL1G10640 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 1.1e-07 60.5 144 29.2
CSS0003041 Camellia sinensis var. sinensis HOM05D006065 ORTHO05D007672 4.3e-07 58.5 183 27.9
Os04g0558500 Oryza sativa ssp. japonica HOM05D006065 ORTHO05D007672 2.2e-06 56.2 116 31.9


User provided reference genes

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