Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G066901 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 1.3e-114 416.4 200 100.0
Phvul.008G092300 Phaseolus vulgaris HOM05D001899 ORTHO05D002871 1.5e-59 233.4 120 95.8
Phvul.002G085800 Phaseolus vulgaris HOM05D001899 ORTHO05D002871 1.0e-55 220.7 151 76.8
Phvul.008G067200 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 2.9e-55 219.2 195 58.5
Phvul.008G067000 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 7.5e-51 204.5 187 57.8
Phvul.008G066700 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 2.9e-47 192.6 187 55.6
Phvul.008G066800 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 2.7e-40 169.5 187 49.7
Phvul.008G066600 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 9.5e-38 161.0 123 65.0
Phvul.008G069632 Phaseolus vulgaris HOM05D001899 ORTHO05D002871 2.4e-25 119.8 89 62.9
Glyma.18G099200 Glycine max HOM05D001899 ORTHO05D001858 6.0e-24 115.2 198 36.4
Glyma.18G231200 Glycine max HOM05D001899 ORTHO05D001858 7.8e-24 114.8 149 42.3
Phvul.006G040900 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 1.9e-22 110.2 198 35.9
Lj6g0003184 Lotus japonicus HOM05D001899 ORTHO05D001858 1.4e-17 94.0 198 33.8
Phvul.008G066501 Phaseolus vulgaris HOM05D001899 ORTHO05D002871 2.1e-16 90.1 56 76.8
VMungo0540G1898 Vigna mungo HOM05D001899 ORTHO05D001858 5.6e-14 82.0 130 36.9
Glyma.18G111400 Glycine max HOM05D001899 ORTHO05D001858 8.9e-12 74.7 133 36.8
Aqoxy4G00976 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 2.6e-11 73.2 102 38.2
Cc03_g14670 Coffea canephora HOM05D001899 ORTHO05D001858 4.1e-09 65.9 124 34.7
Aqoxy1G02156 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 7.1e-09 65.1 95 36.8
Phvul.006G039000 Phaseolus vulgaris HOM05D001899 ORTHO05D001858 1.2e-08 64.3 146 32.9
RcHm_v2.0_Chr2g0151861 Rosa chinensis HOM05D001899 ORTHO05D001858 1.2e-08 64.3 119 34.5
Os01g0799000 Oryza sativa ssp. japonica HOM05D001899 ORTHO05D001858 1.6e-08 63.9 95 37.9
Eucgr.J01169 Eucalyptus grandis HOM05D001899 ORTHO05D001858 3.5e-08 62.8 77 40.3
MD09G1222600 Malus domestica HOM05D001899 ORTHO05D001858 7.8e-08 61.6 115 30.4
Aqoxy4G00975 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 1.7e-07 60.5 65 44.6
Dinv09330 Davidia involucrata HOM05D001899 ORTHO05D001858 2.3e-07 60.1 72 40.3
FAN09G0419 Fragaria x ananassa HOM05D001899 ORTHO05D001858 2.3e-07 60.1 95 36.8
Atru.chr2.2777 Acer truncatum HOM05D001899 ORTHO05D001858 3.0e-07 59.7 111 31.5
FAN18G0045 Fragaria x ananassa HOM05D001899 ORTHO05D001858 3.9e-07 59.3 48 58.3
Hma1.2p1_0565F.1_g179700 Hydrangea macrophylla HOM05D001899 ORTHO05D001858 3.9e-07 59.3 97 36.1
Migut.D01736 Erythranthe guttata HOM05D000011 ORTHO05D000018 5.1e-07 58.9 93 34.4
FAN05G3399 Fragaria x ananassa HOM05D001899 ORTHO05D001858 5.1e-07 58.9 106 33.0
FvH4_6g29201 Fragaria vesca HOM05D001899 ORTHO05D001858 8.7e-07 58.2 95 35.8
FAN14G4804 Fragaria x ananassa HOM05D001899 ORTHO05D001858 8.7e-07 58.2 95 35.8
Eucgr.J01171 Eucalyptus grandis HOM05D001899 ORTHO05D001858 1.1e-06 57.8 77 37.7
Potri.019G036900 Populus trichocarpa HOM05D001899 ORTHO05D001858 1.1e-06 57.8 68 45.6
CARHR049260 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.5e-06 57.4 107 34.6
CARHR049580 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.5e-06 57.4 90 35.6
Dinv15506 Davidia involucrata HOM05D001899 ORTHO05D001858 1.5e-06 57.4 89 37.1
Migut.D01731 Erythranthe guttata HOM05D000011 ORTHO05D000018 1.5e-06 57.4 96 32.3
Nn1g03842 Nelumbo nucifera HOM05D001899 ORTHO05D001858 1.5e-06 57.4 104 34.6
Eucgr.J01170 Eucalyptus grandis HOM05D001899 ORTHO05D001858 2.5e-06 56.6 75 37.3
FvH4_3g11504 Fragaria vesca HOM05D000011 ORTHO05D000157 2.5e-06 56.6 141 28.4
Aqoxy1G04207 Aquilegia oxysepala HOM05D001899 ORTHO05D001858 3.3e-06 56.2 79 36.7
CARHR049700 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.3e-06 56.2 104 31.7
RcHm_v2.0_Chr2g0111461 Rosa chinensis HOM05D001899 ORTHO05D001858 3.3e-06 56.2 72 41.7
Os06g0330100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 9.6e-06 54.7 114 27.2
Prupe.3G176100 Prunus persica HOM05D001899 ORTHO05D001858 9.6e-06 54.7 58 41.4


User provided reference genes

Program Settings