Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 3.2e-69 265.0 138 100.0
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 2.2e-62 242.3 138 92.0
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 5.9e-55 217.6 138 83.3
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 1.9e-53 212.6 138 81.2
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 8.0e-52 207.2 138 79.7
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 4.5e-39 164.9 138 67.4
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 4.2e-37 158.3 140 62.9
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 5.5e-37 157.9 138 65.2
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 1.2e-36 156.8 140 62.1
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 2.8e-33 145.6 138 60.9
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 2.4e-32 142.5 138 58.7
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 7.7e-31 137.5 139 56.1
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 1.5e-29 133.3 138 56.5
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 1.5e-29 133.3 137 56.2
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 3.6e-28 128.6 134 55.2
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 1.0e-27 127.1 133 56.4
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.4e-27 126.7 138 54.3
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.4e-27 126.7 122 57.4
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.8e-27 126.3 134 54.5
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 2.6e-26 122.5 138 52.9
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 5.7e-26 121.3 135 51.9
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.7e-25 119.8 142 47.2
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 3.7e-25 118.6 138 49.3
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 3.7e-25 118.6 138 49.3
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 4.9e-25 118.2 135 51.1
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 1.1e-24 117.1 138 49.3
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 1.8e-24 116.3 139 48.9
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 2.4e-24 115.9 114 55.3
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 2.4e-24 115.9 138 47.8
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 4.1e-24 115.2 138 51.4
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 5.4e-24 114.8 122 51.6
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 7.0e-24 114.4 83 71.1
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 1.2e-23 113.6 141 49.6
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 2.7e-23 112.5 136 48.5
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 2.7e-23 112.5 121 51.2
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 5.9e-23 111.3 142 54.2
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 5.9e-23 111.3 135 50.4
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 7.8e-23 110.9 134 50.7
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 1.0e-22 110.5 134 49.3
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 1.3e-22 110.2 138 45.7
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 1.7e-22 109.8 140 46.4
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 2.3e-22 109.4 138 47.8
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.9e-22 109.0 135 47.4
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.9e-22 109.0 135 47.4
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 3.9e-22 108.6 134 45.5
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 3.9e-22 108.6 137 48.2
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 5.0e-22 108.2 140 48.6
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 5.0e-22 108.2 138 50.0
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 8.6e-22 107.5 114 55.3
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 8.6e-22 107.5 135 46.7
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 1.1e-21 107.1 114 55.3
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 4.3e-21 105.1 134 49.3
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 5.6e-21 104.8 135 46.7
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 5.6e-21 104.8 142 46.5
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 7.3e-21 104.4 133 45.9
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 7.3e-21 104.4 138 47.1
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 2.1e-20 102.8 133 45.1
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.7e-20 101.7 124 53.2
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.0e-19 100.5 142 50.0
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.0e-19 100.5 142 50.0
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 1.8e-19 99.8 138 44.2
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 2.3e-19 99.4 140 47.9
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 2.3e-19 99.4 138 49.3
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 3.1e-19 99.0 123 46.3
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 4.0e-19 98.6 124 44.4
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 5.2e-19 98.2 165 46.7
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 6.8e-19 97.8 145 42.8
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 2.0e-18 96.3 125 48.8
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 2.6e-18 95.9 138 47.8
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 2.6e-18 95.9 137 43.8
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.6e-18 95.9 118 46.6
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 4.4e-18 95.1 127 47.2
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 4.4e-18 95.1 115 49.6
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 5.8e-18 94.7 137 40.1
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 5.8e-18 94.7 137 40.9
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 1.7e-17 93.2 106 47.2
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.7e-17 92.0 118 48.3
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 6.4e-17 91.3 133 43.6
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 6.4e-17 91.3 120 45.0
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 8.3e-17 90.9 136 41.2
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 1.1e-16 90.5 135 40.0
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 3.2e-16 89.0 116 53.4
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 9.2e-16 87.4 84 54.8
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 9.2e-16 87.4 84 54.8
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 9.2e-16 87.4 107 50.5
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 9.2e-16 87.4 136 40.4
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 1.2e-15 87.0 125 43.2
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 1.2e-15 87.0 131 42.7
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.6e-15 86.7 128 43.0
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 3.5e-15 85.5 101 48.5
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 3.5e-15 85.5 101 48.5
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 3.5e-15 85.5 137 38.7
Medtr8g095650 Medicago truncatula HOM05D000509 ORTHO05D006393 3.5e-15 85.5 86 58.1
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 4.6e-15 85.1 84 53.6
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 6.0e-15 84.7 135 42.2
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 6.0e-15 84.7 117 47.0
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 1.0e-14 84.0 129 44.2
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 1.3e-14 83.6 127 41.7
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 2.3e-14 82.8 84 50.0
AL5G43630 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 3.0e-14 82.4 124 40.3
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 3.9e-14 82.0 114 43.9
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 3.9e-14 82.0 134 38.1
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 5.0e-14 81.6 84 50.0
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 5.0e-14 81.6 79 55.7
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 1.9e-13 79.7 114 40.4
Carub.0005s2804 Capsella rubella HOM05D000509 ORTHO05D006393 7.3e-13 77.8 66 59.1
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 9.5e-13 77.4 122 41.8
BraA04t15830Z Brassica rapa HOM05D000509 ORTHO05D006393 9.5e-13 77.4 122 41.8
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 1.6e-12 76.6 148 38.5
AT4G07940 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 2.8e-12 75.9 124 39.5
AL1G53560 Arabidopsis lyrata HOM05D000509 ORTHO05D006393 3.6e-12 75.5 66 57.6
BcaC07g40634 Brassica carinata HOM05D000509 ORTHO05D006393 3.6e-12 75.5 89 49.4
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 3.6e-12 75.5 124 37.9
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 4.7e-12 75.1 87 50.6
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 4.7e-12 75.1 87 50.6
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 1.1e-11 73.9 108 47.2
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 2.3e-11 72.8 156 30.1
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 5.2e-11 71.6 97 43.3
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 8.9e-11 70.9 148 37.2
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 1.2e-10 70.5 87 50.6
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 2.0e-10 69.7 80 45.0
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 2.6e-10 69.3 133 36.1
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 3.4e-10 68.9 108 42.6
QL11p053603 Quercus lobata HOM05D000509 ORTHO05D006393 5.8e-10 68.2 72 52.8
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 7.5e-10 67.8 126 34.1
Aa31LG5G5170 Aethionema arabicum HOM05D000509 ORTHO05D006393 1.3e-09 67.0 79 45.6
Potri.006G202400 Populus trichocarpa HOM05D000509 ORTHO05D006393 2.2e-09 66.2 88 48.9
BolC4t24686H Brassica oleracea HOM05D000509 ORTHO05D006393 6.4e-09 64.7 87 46.0
PSO063G2671 Papaver somniferum HOM05D000509 ORTHO05D006393 6.4e-09 64.7 133 37.6
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 2.4e-08 62.8 139 33.1
ATR0680G086 Amborella trichopoda HOM05D000509 ORTHO05D006393 7.1e-08 61.2 97 39.2
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 7.1e-08 61.2 139 33.1
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 1.2e-07 60.5 140 30.7
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 1.0e-06 57.4 79 43.0


User provided reference genes

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