Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G065200 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.7e-78 295.8 135 100.0
Phvul.002G081800 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 7.2e-74 280.4 135 94.1
Phvul.002G081900 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.2e-73 279.6 135 93.3
Phvul.008G065100 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.6e-73 279.3 135 91.9
Phvul.008G064900 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 2.3e-72 275.4 135 91.9
VMungo1383G3343 Vigna mungo HOM05D010387 ORTHO05D012879 4.1e-61 238.0 134 76.9
Phvul.008G065000 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 5.2e-56 221.1 135 78.5
Glyma.18G232566 Glycine max HOM05D010387 ORTHO05D012879 1.7e-30 136.3 139 49.6
Glyma.09G259700 Glycine max HOM05D010387 ORTHO05D012879 6.4e-30 134.4 141 51.1
Phvul.008G063050 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 2.8e-25 119.0 135 45.2
Phvul.008G063300 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 2.8e-25 119.0 135 43.7
Glyma.18G232632 Glycine max HOM05D010387 ORTHO05D012879 1.1e-24 117.1 136 45.6
Phvul.008G064800 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.3e-19 100.1 137 38.7
Glyma.18G232500 Glycine max HOM05D010387 ORTHO05D012879 2.3e-19 99.4 136 41.9
Glyma.18G232700 Glycine max HOM05D010387 ORTHO05D012879 2.5e-18 95.9 136 41.9
Glyma.09G260000 Glycine max HOM05D036898 ORTHO05D035990 2.8e-17 92.4 138 35.5
VMungo1383G3327 Vigna mungo HOM05D010387 ORTHO05D012879 4.5e-15 85.1 137 33.6
Medtr1g057370 Medicago truncatula HOM05D000256 ORTHO05D000119 2.9e-14 82.4 137 36.5
Medtr1g058520 Medicago truncatula HOM05D000256 ORTHO05D000119 1.1e-13 80.5 122 38.5
Psat6g084040 Pisum sativum HOM05D000256 ORTHO05D000119 3.2e-13 79.0 136 36.8
Medtr1g060940 Medicago truncatula HOM05D000256 ORTHO05D000119 4.2e-13 78.6 129 35.7
Lalb_Chr06g0176141 Lupinus albus HOM05D000256 ORTHO05D031557 2.7e-12 75.9 136 33.8
Medtr1g057250 Medicago truncatula HOM05D000256 ORTHO05D000119 3.5e-12 75.5 140 36.4
Medtr1g060930 Medicago truncatula HOM05D000256 ORTHO05D000119 6.0e-12 74.7 128 34.4
Prupe.1G055500 Prunus persica HOM05D000256 ORTHO05D000119 6.0e-12 74.7 108 38.9
Medtr1g058410 Medicago truncatula HOM05D000256 ORTHO05D000119 7.9e-12 74.3 144 35.4
Medtr1g058500 Medicago truncatula HOM05D000256 ORTHO05D000119 1.8e-11 73.2 142 31.7
TPR.G5119 Trifolium pratense HOM05D000256 ORTHO05D000119 3.0e-11 72.4 123 36.6
Medtr1g028420 Medicago truncatula HOM05D000256 ORTHO05D000119 3.9e-11 72.0 141 35.5
Medtr1g058400 Medicago truncatula HOM05D000256 ORTHO05D000119 5.1e-11 71.6 142 33.1
Medtr1g058430 Medicago truncatula HOM05D000256 ORTHO05D000119 5.1e-11 71.6 142 33.1
Medtr1g057310 Medicago truncatula HOM05D000256 ORTHO05D000119 1.1e-10 70.5 139 36.7
Prupe.1G062300 Prunus persica HOM05D000256 ORTHO05D000119 1.9e-10 69.7 126 29.4
Lalb_Chr06g0176181 Lupinus albus HOM05D000256 ORTHO05D012879 2.5e-10 69.3 129 29.5
Manes.03G153500 Manihot esculenta HOM05D000256 ORTHO05D000119 2.5e-10 69.3 132 33.3
Atru.chr4.1808 Acer truncatum HOM05D000256 ORTHO05D000119 4.3e-10 68.6 136 33.8
Lalb_Chr06g0176131 Lupinus albus HOM05D000256 ORTHO05D000119 4.3e-10 68.6 138 30.4
Prupe.1G062400 Prunus persica HOM05D000256 ORTHO05D000119 5.6e-10 68.2 126 29.4
Medtr1g057240 Medicago truncatula HOM05D000256 ORTHO05D000119 7.4e-10 67.8 138 33.3
TPR.G22641 Trifolium pratense HOM05D000256 ORTHO05D000119 9.6e-10 67.4 121 34.7
VMungo1383G0639 Vigna mungo HOM05D000256 ORTHO05D000119 9.6e-10 67.4 143 34.3
Phvul.008G065300 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.3e-09 67.0 122 33.6
Phvul.008G065350 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.3e-09 67.0 136 33.8
TPR.G5085 Trifolium pratense HOM05D000256 ORTHO05D000119 1.3e-09 67.0 127 31.5
Lalb_Chr06g0176221 Lupinus albus HOM05D000256 ORTHO05D000119 2.1e-09 66.2 143 30.1
GSVIVG01014874001 Vitis vinifera HOM05D000256 ORTHO05D000119 2.1e-09 66.2 126 30.2
Lalb_Chr06g0176321 Lupinus albus HOM05D000256 ORTHO05D000119 2.8e-09 65.9 59 45.8
TPR.G943 Trifolium pratense HOM05D000256 ORTHO05D000119 2.8e-09 65.9 124 29.0
AL7G38890 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 3.7e-09 65.5 122 32.0
Phvul.008G063000 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 4.8e-09 65.1 137 32.8
Manes.03G154300 Manihot esculenta HOM05D000256 ORTHO05D000119 6.2e-09 64.7 126 31.0
Phvul.008G063600 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 6.2e-09 64.7 143 33.6
Phvul.008G062900 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.1e-08 63.9 143 36.4
TPR.G20956 Trifolium pratense HOM05D000256 ORTHO05D000119 1.1e-08 63.9 96 34.4
TPR.G36139 Trifolium pratense HOM05D000256 ORTHO05D000119 1.1e-08 63.9 138 29.7
VMungo1383G1351 Vigna mungo HOM05D000256 ORTHO05D000119 1.1e-08 63.9 138 35.5
Lalb_Chr06g0176331 Lupinus albus HOM05D000256 ORTHO05D000119 1.4e-08 63.5 140 33.6
TPR.G8259 Trifolium pratense HOM05D000256 ORTHO05D000119 1.4e-08 63.5 140 35.0
Prupe.1G062100 Prunus persica HOM05D000256 ORTHO05D000119 1.8e-08 63.2 105 32.4
Aa31LG2G14700 Aethionema arabicum HOM05D000256 ORTHO05D000119 2.4e-08 62.8 131 31.3
Aa31LG10G5940 Aethionema arabicum HOM05D000256 ORTHO05D000119 3.1e-08 62.4 113 32.7
Manes.03G153950 Manihot esculenta HOM05D000256 ORTHO05D000119 3.1e-08 62.4 127 29.9
Prupe.1G049500 Prunus persica HOM05D000256 ORTHO05D000119 3.1e-08 62.4 109 39.4
Manes.03G153250 Manihot esculenta HOM05D000256 ORTHO05D000119 4.0e-08 62.0 129 33.3
C07p47740 Brassica napus HOM05D000256 ORTHO05D000119 6.9e-08 61.2 114 32.5
Lalb_Chr06g0176301 Lupinus albus HOM05D000256 ORTHO05D000119 6.9e-08 61.2 135 30.4
Lalb_Chr06g0176311 Lupinus albus HOM05D010387 ORTHO05D000119 6.9e-08 61.2 55 47.3
RcHm_v2.0_Chr4g0396771 Rosa chinensis HOM05D000256 ORTHO05D000119 6.9e-08 61.2 136 29.4
BcaC02g12403 Brassica carinata HOM05D000256 ORTHO05D000119 9.0e-08 60.8 128 27.3
FAN22G0130 Fragaria x ananassa HOM05D000256 ORTHO05D000119 9.0e-08 60.8 109 34.9
Medtr1g068650 Medicago truncatula HOM05D000256 ORTHO05D000119 9.0e-08 60.8 58 43.1
BcaC06g33456 Brassica carinata HOM05D000256 ORTHO05D000119 1.2e-07 60.5 114 32.5
Manes.03G154200 Manihot esculenta HOM05D000256 ORTHO05D000119 1.2e-07 60.5 129 32.6
arahy.Tifrunner.gnm1.ann1.7DU3RW Arachis hypogaea HOM05D010387 ORTHO05D031557 1.5e-07 60.1 56 48.2
arahy.Tifrunner.gnm1.ann1.BEA8X6 Arachis hypogaea HOM05D010387 ORTHO05D031557 1.5e-07 60.1 56 48.2
Lalb_Chr06g0176201 Lupinus albus HOM05D000256 ORTHO05D000119 1.5e-07 60.1 54 40.7
Lalb_Chr06g0176161 Lupinus albus HOM05D000256 ORTHO05D000119 2.0e-07 59.7 88 33.0
BolC7t45299H Brassica oleracea HOM05D000256 ORTHO05D000119 2.6e-07 59.3 113 31.0
Lalb_Chr06g0175681 Lupinus albus HOM05D000256 ORTHO05D000119 2.6e-07 59.3 118 30.5
Lalb_Chr06g0175691 Lupinus albus HOM05D000256 ORTHO05D000119 2.6e-07 59.3 118 30.5
Lalb_Chr06g0175701 Lupinus albus HOM05D000256 ORTHO05D000119 2.6e-07 59.3 118 30.5
Manes.03G153351 Manihot esculenta HOM05D000256 ORTHO05D000119 2.6e-07 59.3 127 29.9
Thhalv10006292m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 3.4e-07 58.9 115 27.8
Manes.03G153800 Manihot esculenta HOM05D000256 ORTHO05D000119 3.4e-07 58.9 127 32.3
TPR.G34007 Trifolium pratense HOM05D000256 ORTHO05D000119 3.4e-07 58.9 56 46.4
Ciclev10006408m.g Citrus clementina HOM05D000256 ORTHO05D000119 4.5e-07 58.5 122 29.5
AL3G29940 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 5.8e-07 58.2 64 32.8
AT3G17080 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 5.8e-07 58.2 60 35.0
A03p49670 Brassica napus HOM05D000256 ORTHO05D000119 5.8e-07 58.2 114 31.6
BraA03t14066Z Brassica rapa HOM05D000256 ORTHO05D000119 5.8e-07 58.2 114 31.6
Haze_13486 Corylus avellana HOM05D000256 ORTHO05D000119 5.8e-07 58.2 76 35.5
Lalb_Chr06g0176281 Lupinus albus HOM05D000256 ORTHO05D000119 5.8e-07 58.2 111 34.2
MD17G1052500 Malus domestica HOM05D000256 ORTHO05D000119 5.8e-07 58.2 120 30.8
MD17G1052700 Malus domestica HOM05D000256 ORTHO05D000119 5.8e-07 58.2 59 40.7
Manes.03G153600 Manihot esculenta HOM05D000256 ORTHO05D000119 5.8e-07 58.2 128 32.0
Prupe.1G058100 Prunus persica HOM05D000256 ORTHO05D000119 5.8e-07 58.2 148 27.7
TPR.G21841 Trifolium pratense HOM05D000256 ORTHO05D000119 5.8e-07 58.2 129 31.8
Cfa014872 Carpinus fangiana HOM05D000256 ORTHO05D000119 7.6e-07 57.8 58 39.7
Lalb_Chr06g0176151 Lupinus albus HOM05D000256 ORTHO05D000119 7.6e-07 57.8 83 31.3
Phvul.011G171500 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 7.6e-07 57.8 140 32.9
TPR.G24143 Trifolium pratense HOM05D000256 ORTHO05D000119 7.6e-07 57.8 142 26.8
MELO3C024072.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.0e-06 57.4 108 35.2
Manes.03G153550 Manihot esculenta HOM05D000256 ORTHO05D000119 1.3e-06 57.0 123 30.1
BcaB04g18362 Brassica carinata HOM05D000256 ORTHO05D000119 1.7e-06 56.6 128 26.6
CiPaw.01G205000 Carya illinoinensis HOM05D000256 ORTHO05D000119 1.7e-06 56.6 128 27.3
Eucgr.H01302 Eucalyptus grandis HOM05D000256 ORTHO05D000119 1.7e-06 56.6 100 33.0
TPR.G18492 Trifolium pratense HOM05D000256 ORTHO05D000119 1.7e-06 56.6 141 24.1
Manes.03G153400 Manihot esculenta HOM05D000256 ORTHO05D000119 2.2e-06 56.2 55 40.0
A03p05390 Brassica napus HOM05D000256 ORTHO05D000119 2.9e-06 55.8 109 32.1
Carub.0005s1059 Capsella rubella HOM05D005246 ORTHO05D000119 2.9e-06 55.8 61 36.1
Lalb_Chr06g0175651 Lupinus albus HOM05D000256 ORTHO05D000119 2.9e-06 55.8 42 47.6
THA.LOC104812007 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 2.9e-06 55.8 58 39.7
BcaB04g18372 Brassica carinata HOM05D000256 ORTHO05D000119 3.8e-06 55.5 114 28.9
ClCG06G007560 Citrullus lanatus HOM05D000256 ORTHO05D000119 3.8e-06 55.5 138 29.0
Lalb_Chr06g0175671 Lupinus albus HOM05D000256 ORTHO05D000119 3.8e-06 55.5 80 33.8
AL3G30060 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 4.9e-06 55.1 60 35.0
BcaB01g05431 Brassica carinata HOM05D000256 ORTHO05D000119 4.9e-06 55.1 109 31.2
BcaC07g37952 Brassica carinata HOM05D000256 ORTHO05D000119 4.9e-06 55.1 59 33.9
A08p12430 Brassica napus HOM05D000256 ORTHO05D000119 4.9e-06 55.1 59 33.9
BolC8t48334H Brassica oleracea HOM05D000256 ORTHO05D000119 4.9e-06 55.1 59 33.9
BraA08t33213Z Brassica rapa HOM05D000256 ORTHO05D000119 4.9e-06 55.1 59 33.9
Carub.0003s1682 Capsella rubella HOM05D000256 ORTHO05D000119 4.9e-06 55.1 130 30.0
CiPaw.01G204900 Carya illinoinensis HOM05D000256 ORTHO05D000119 4.9e-06 55.1 128 28.1
MELO3C030137.2 Cucumis melo HOM05D000256 ORTHO05D000119 4.9e-06 55.1 110 35.5
MD09G1134100 Malus domestica HOM05D000256 ORTHO05D000119 4.9e-06 55.1 131 29.8
TPR.G29718 Trifolium pratense HOM05D000256 ORTHO05D000119 4.9e-06 55.1 109 24.8
Phvul.011G169100 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 6.5e-06 54.7 52 44.2
THA.LOC104801052 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 6.5e-06 54.7 125 26.4
A01p37270 Brassica napus HOM05D000256 ORTHO05D000119 8.4e-06 54.3 59 33.9


User provided reference genes

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