Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G064900 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 2.2e-78 295.4 135 100.0
Phvul.002G081800 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 9.5e-74 280.0 135 94.1
Phvul.002G081900 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.6e-73 279.3 135 93.3
Phvul.008G065200 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.8e-72 275.8 135 91.9
Phvul.008G065100 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 4.9e-70 267.7 135 88.1
Phvul.008G065000 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 6.4e-62 240.7 135 85.2
VMungo1383G3343 Vigna mungo HOM05D010387 ORTHO05D012879 4.7e-57 224.6 134 72.4
Glyma.09G259700 Glycine max HOM05D010387 ORTHO05D012879 6.0e-28 127.9 141 48.2
Glyma.18G232566 Glycine max HOM05D010387 ORTHO05D012879 1.7e-27 126.3 129 48.1
Phvul.008G063050 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 4.0e-24 115.2 135 43.7
Phvul.008G063300 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 4.0e-24 115.2 135 42.2
Glyma.18G232632 Glycine max HOM05D010387 ORTHO05D012879 1.2e-20 103.6 134 42.5
Glyma.09G260000 Glycine max HOM05D036898 ORTHO05D035990 1.6e-17 93.2 103 38.8
Glyma.18G232500 Glycine max HOM05D010387 ORTHO05D012879 1.1e-16 90.5 136 38.2
Glyma.18G232700 Glycine max HOM05D010387 ORTHO05D012879 5.8e-15 84.7 136 38.2
VMungo1383G3327 Vigna mungo HOM05D010387 ORTHO05D012879 4.9e-14 81.6 137 32.8
Medtr1g058520 Medicago truncatula HOM05D000256 ORTHO05D000119 1.1e-13 80.5 122 38.5
Phvul.008G065450 Phaseolus vulgaris HOM05D036898 ORTHO05D035990 4.2e-13 78.6 134 32.8
Medtr1g057370 Medicago truncatula HOM05D000256 ORTHO05D000119 4.6e-12 75.1 137 35.0
Prupe.1G055500 Prunus persica HOM05D000256 ORTHO05D000119 1.0e-11 73.9 108 38.0
TPR.G5119 Trifolium pratense HOM05D000256 ORTHO05D000119 6.7e-11 71.2 123 38.2
Medtr1g060940 Medicago truncatula HOM05D000256 ORTHO05D000119 8.7e-11 70.9 116 37.1
Lalb_Chr06g0176141 Lupinus albus HOM05D000256 ORTHO05D031557 1.1e-10 70.5 136 32.4
Psat6g084040 Pisum sativum HOM05D000256 ORTHO05D000119 1.9e-10 69.7 128 33.6
TPR.G15971 Trifolium pratense HOM05D000256 ORTHO05D000119 3.3e-10 68.9 102 35.3
Prupe.1G062300 Prunus persica HOM05D000256 ORTHO05D000119 4.3e-10 68.6 129 31.0
Medtr1g028420 Medicago truncatula HOM05D000256 ORTHO05D000119 7.4e-10 67.8 134 34.3
Medtr1g060930 Medicago truncatula HOM05D000256 ORTHO05D000119 7.4e-10 67.8 110 34.5
Prupe.1G062400 Prunus persica HOM05D000256 ORTHO05D000119 1.3e-09 67.0 126 30.2
Medtr1g057310 Medicago truncatula HOM05D000256 ORTHO05D000119 3.7e-09 65.5 142 35.2
TPR.G22641 Trifolium pratense HOM05D000256 ORTHO05D000119 3.7e-09 65.5 122 36.1
Lalb_Chr06g0176181 Lupinus albus HOM05D000256 ORTHO05D012879 8.2e-09 64.3 129 28.7
Manes.03G153500 Manihot esculenta HOM05D000256 ORTHO05D000119 8.2e-09 64.3 141 30.5
TPR.G943 Trifolium pratense HOM05D000256 ORTHO05D000119 1.1e-08 63.9 132 28.8
Lalb_Chr06g0176131 Lupinus albus HOM05D000256 ORTHO05D000119 1.4e-08 63.5 138 29.0
Lalb_Chr06g0176311 Lupinus albus HOM05D010387 ORTHO05D000119 1.8e-08 63.2 55 49.1
Phvul.008G065300 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 1.8e-08 63.2 133 29.3
TPR.G36139 Trifolium pratense HOM05D000256 ORTHO05D000119 1.8e-08 63.2 132 28.8
TPR.G5085 Trifolium pratense HOM05D000256 ORTHO05D000119 4.0e-08 62.0 111 32.4
Aa31LG2G14700 Aethionema arabicum HOM05D000256 ORTHO05D000119 5.3e-08 61.6 110 31.8
GSVIVG01014874001 Vitis vinifera HOM05D000256 ORTHO05D000119 6.9e-08 61.2 125 27.2
Thhalv10006292m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 9.0e-08 60.8 110 27.3
Lalb_Chr06g0176221 Lupinus albus HOM05D000256 ORTHO05D000119 1.2e-07 60.5 137 31.4
RcHm_v2.0_Chr4g0396771 Rosa chinensis HOM05D000256 ORTHO05D000119 1.2e-07 60.5 136 30.1
BcaC02g12403 Brassica carinata HOM05D000256 ORTHO05D000119 1.5e-07 60.1 128 27.3
TPR.G20956 Trifolium pratense HOM05D000256 ORTHO05D000119 1.5e-07 60.1 96 33.3
FAN22G0130 Fragaria x ananassa HOM05D000256 ORTHO05D000119 2.0e-07 59.7 109 33.9
AL3G30060 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 2.6e-07 59.3 102 32.4
Manes.03G153250 Manihot esculenta HOM05D000256 ORTHO05D000119 2.6e-07 59.3 129 32.6
AL3G29940 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 3.4e-07 58.9 64 34.4
Ciclev10006408m.g Citrus clementina HOM05D000256 ORTHO05D000119 3.4e-07 58.9 103 30.1
Prupe.1G049500 Prunus persica HOM05D000256 ORTHO05D000119 3.4e-07 58.9 109 39.4
THA.LOC104812007 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 3.4e-07 58.9 100 33.0
Aa31LG10G5940 Aethionema arabicum HOM05D000256 ORTHO05D000119 4.5e-07 58.5 111 30.6
AT3G17080 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 4.5e-07 58.5 60 36.7
Eucgr.H01302 Eucalyptus grandis HOM05D000256 ORTHO05D000119 4.5e-07 58.5 113 31.0
Lalb_Chr06g0176331 Lupinus albus HOM05D000256 ORTHO05D000119 5.8e-07 58.2 134 29.9
Manes.03G153351 Manihot esculenta HOM05D000256 ORTHO05D000119 5.8e-07 58.2 54 42.6
Haze_13486 Corylus avellana HOM05D000256 ORTHO05D000119 7.6e-07 57.8 76 36.8
MELO3C024072.2 Cucumis melo HOM05D000256 ORTHO05D000119 7.6e-07 57.8 123 33.3
Manes.03G154200 Manihot esculenta HOM05D000256 ORTHO05D000119 7.6e-07 57.8 129 31.8
BcaC06g33456 Brassica carinata HOM05D000256 ORTHO05D000119 1.0e-06 57.4 114 31.6
BcaC07g37967 Brassica carinata HOM05D000256 ORTHO05D000119 1.0e-06 57.4 114 29.8
BcaC07g37968 Brassica carinata HOM05D000256 ORTHO05D000119 1.0e-06 57.4 114 29.8
C07p47740 Brassica napus HOM05D000256 ORTHO05D000119 1.0e-06 57.4 114 31.6
BolC8t48347H Brassica oleracea HOM05D000256 ORTHO05D000119 1.0e-06 57.4 114 29.8
Lalb_Chr06g0176201 Lupinus albus HOM05D000256 ORTHO05D000119 1.0e-06 57.4 54 38.9
Cfa014872 Carpinus fangiana HOM05D000256 ORTHO05D000119 1.3e-06 57.0 58 39.7
Manes.03G153950 Manihot esculenta HOM05D000256 ORTHO05D000119 1.3e-06 57.0 127 27.6
arahy.Tifrunner.gnm1.ann1.7DU3RW Arachis hypogaea HOM05D010387 ORTHO05D031557 1.7e-06 56.6 56 44.6
Lalb_Chr06g0175651 Lupinus albus HOM05D000256 ORTHO05D000119 1.7e-06 56.6 119 30.3
MD09G1134100 Malus domestica HOM05D000256 ORTHO05D000119 1.7e-06 56.6 133 29.3
Phvul.008G063600 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.7e-06 56.6 141 30.5
Prupe.1G062100 Prunus persica HOM05D000256 ORTHO05D000119 1.7e-06 56.6 121 33.9
Phvul.008G065350 Phaseolus vulgaris HOM05D010387 ORTHO05D012879 2.2e-06 56.2 136 28.7
TPR.G21841 Trifolium pratense HOM05D000256 ORTHO05D000119 2.2e-06 56.2 129 31.0
ClCG06G007560 Citrullus lanatus HOM05D000256 ORTHO05D000119 2.9e-06 55.8 139 28.8
MELO3C030137.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.9e-06 55.8 109 34.9
A01p37270 Brassica napus HOM05D000256 ORTHO05D000119 3.8e-06 55.5 59 35.6
Lalb_Chr06g0176211 Lupinus albus HOM05D000256 ORTHO05D000119 3.8e-06 55.5 54 44.4
Lalb_Chr06g0176291 Lupinus albus HOM05D000256 ORTHO05D000119 3.8e-06 55.5 133 27.1
Manes.03G153800 Manihot esculenta HOM05D000256 ORTHO05D000119 3.8e-06 55.5 55 41.8
BcaB04g18372 Brassica carinata HOM05D000256 ORTHO05D000119 4.9e-06 55.1 114 28.9
MD17G1052700 Malus domestica HOM05D000256 ORTHO05D000119 4.9e-06 55.1 59 39.0
Medtr1g068650 Medicago truncatula HOM05D000256 ORTHO05D000119 4.9e-06 55.1 44 47.7
Manes.03G153550 Manihot esculenta HOM05D000256 ORTHO05D000119 8.4e-06 54.3 54 37.0


User provided reference genes

Program Settings