Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 3.7e-154 548.1 269 100.0
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 1.0e-143 513.5 269 92.2
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 6.1e-141 504.2 269 90.0
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 8.0e-141 503.8 269 89.6
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.4e-140 503.1 269 89.2
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 3.0e-140 501.9 269 90.3
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.3e-138 496.5 281 86.1
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 2.2e-138 495.7 269 88.8
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 3.7e-138 495.0 269 88.1
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 1.6e-136 489.6 269 86.6
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 2.0e-136 489.2 268 86.6
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 1.0e-135 486.9 269 85.9
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 1.0e-135 486.9 267 86.5
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 1.3e-135 486.5 269 87.4
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 8.6e-135 483.8 269 85.9
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 2.5e-134 482.3 269 85.5
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 3.3e-134 481.9 269 85.5
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 4.3e-134 481.5 267 85.4
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 5.6e-134 481.1 269 84.0
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 5.6e-134 481.1 269 85.1
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 1.2e-133 479.9 269 83.6
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 1.6e-133 479.6 269 85.5
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 4.7e-133 478.0 269 84.8
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 6.2e-133 477.6 271 84.1
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 6.2e-133 477.6 269 85.9
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 1.8e-132 476.1 263 85.6
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 3.1e-132 475.3 270 83.7
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 5.2e-132 474.6 269 83.6
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 5.2e-132 474.6 265 87.5
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 8.9e-132 473.8 268 84.7
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 1.2e-131 473.4 269 84.0
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 1.2e-131 473.4 270 84.8
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 1.5e-131 473.0 269 83.6
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 3.4e-131 471.9 269 83.3
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.4e-131 471.9 269 83.3
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 3.4e-131 471.9 269 83.3
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 4.4e-131 471.5 271 83.4
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 4.4e-131 471.5 269 83.6
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 5.8e-131 471.1 269 83.6
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.5e-131 470.7 269 82.5
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 9.8e-131 470.3 269 82.5
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 9.8e-131 470.3 269 82.2
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 1.3e-130 469.9 269 81.4
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 1.3e-130 469.9 269 82.9
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 1.3e-130 469.9 269 82.9
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 1.3e-130 469.9 269 82.2
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 2.2e-130 469.2 274 83.2
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 3.7e-130 468.4 271 83.0
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 4.9e-130 468.0 269 82.2
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 4.9e-130 468.0 269 82.2
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 4.9e-130 468.0 269 81.8
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 6.4e-130 467.6 269 81.4
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 1.1e-129 466.8 269 83.3
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 1.4e-129 466.5 267 83.1
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 1.9e-129 466.1 269 80.7
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 1.9e-129 466.1 269 82.9
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 1.9e-129 466.1 269 82.9
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 1.9e-129 466.1 268 82.8
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 2.4e-129 465.7 269 81.4
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.2e-129 465.3 275 81.5
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 4.1e-129 464.9 269 81.8
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 4.1e-129 464.9 269 82.5
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 4.1e-129 464.9 269 83.3
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 5.4e-129 464.5 269 83.3
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 7.0e-129 464.2 269 81.8
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 7.0e-129 464.2 269 80.3
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.0e-129 464.2 275 81.1
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 7.0e-129 464.2 269 82.9
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.2e-129 463.8 269 81.0
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.2e-129 463.8 275 80.4
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 9.2e-129 463.8 266 82.3
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 1.2e-128 463.4 269 83.6
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 1.2e-128 463.4 269 84.4
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 1.6e-128 463.0 269 81.0
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 1.6e-128 463.0 306 76.5
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 2.0e-128 462.6 269 82.9
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 7.8e-128 460.7 269 80.7
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 1.0e-127 460.3 269 80.7
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 1.7e-127 459.5 269 80.7
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 3.0e-127 458.8 269 80.7
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 3.0e-127 458.8 270 80.7
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 1.1e-126 456.8 270 80.7
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 1.5e-126 456.4 271 80.8
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 1.9e-126 456.1 269 81.8
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 3.3e-126 455.3 270 80.4
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 4.3e-126 454.9 269 79.2
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 5.6e-126 454.5 269 78.8
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 5.6e-126 454.5 268 79.9
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 1.2e-125 453.4 244 90.2
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.2e-125 453.4 269 79.9
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 2.1e-125 452.6 270 80.0
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 2.8e-125 452.2 269 78.8
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 1.4e-124 449.9 270 79.6
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 1.4e-124 449.9 267 81.3
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 6.8e-124 447.6 269 78.1
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 1.3e-122 443.4 269 79.2
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 3.7e-122 441.8 261 78.9
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 3.7e-122 441.8 269 78.8
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 1.9e-121 439.5 286 75.2
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 4.1e-121 438.3 269 78.8
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 9.2e-121 437.2 269 78.4
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 2.1e-120 436.0 252 84.5
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 7.8e-120 434.1 269 77.3
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 7.8e-120 434.1 269 75.5
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 2.3e-119 432.6 269 77.3
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 5.1e-119 431.4 275 77.1
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 1.9e-118 429.5 269 78.1
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 1.9e-118 429.5 268 73.9
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 7.3e-118 427.6 269 77.3
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 7.3e-118 427.6 269 77.7
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 5.2e-116 421.4 269 75.1
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 5.2e-116 421.4 268 71.6
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 2.0e-115 419.5 269 72.1
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 2.6e-115 419.1 269 74.7
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.8e-115 417.9 269 75.5
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.3e-114 416.8 272 78.3
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 4.9e-114 414.8 269 73.2
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 1.4e-113 413.3 269 75.8
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 2.4e-113 412.5 237 84.8
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 7.1e-113 411.0 266 72.9
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.1e-112 409.5 269 74.0
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 3.5e-112 408.7 269 72.9
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 1.9e-110 402.9 269 75.1
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 2.5e-110 402.5 269 72.1
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 7.3e-110 401.0 270 70.0
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 3.6e-109 398.7 267 70.0
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.2e-109 397.9 276 68.5
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 6.2e-109 397.9 270 68.1
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.1e-108 395.6 270 70.0
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.0e-108 395.2 276 68.8
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.9e-108 394.0 270 69.6
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.9e-108 394.0 271 68.6
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.5e-107 393.3 276 68.5
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 2.0e-107 392.9 271 68.3
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 2.6e-107 392.5 235 78.7
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 4.4e-107 391.7 271 68.3
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 7.6e-107 391.0 212 86.8
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 7.6e-107 391.0 269 68.0
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 1.3e-106 390.2 269 68.8
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.7e-106 389.8 271 67.9
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 4.2e-105 385.2 270 67.4
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 3.9e-103 378.6 270 66.7
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 7.3e-102 374.4 270 66.3
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 9.6e-102 374.0 271 67.2
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 2.0e-99 366.3 217 84.8
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 1.3e-98 363.6 271 64.9
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.6e-96 356.7 249 66.7
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.5e-94 350.1 211 79.6
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.2e-91 340.5 197 83.2
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 2.2e-90 336.3 295 56.9
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 1.2e-88 330.5 187 83.4
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.8e-87 326.6 189 79.4
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 3.5e-80 302.4 269 56.1
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 1.4e-60 237.3 189 61.9
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 1.0e-58 231.1 143 76.9
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 3.8e-58 229.2 272 44.9
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 3.8e-58 229.2 181 64.6
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.5e-58 228.4 130 80.0
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 3.2e-57 226.1 127 83.5
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 2.2e-53 213.4 188 61.7
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 5.3e-52 208.8 267 41.9
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 3.5e-43 179.5 269 41.3
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 1.2e-40 171.0 278 36.3
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 2.0e-35 153.7 109 71.6
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 4.5e-35 152.5 129 62.8
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 1.3e-34 151.0 88 80.7
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 3.2e-33 146.4 82 84.1
MD09G1245300 Malus domestica HOM05D003837 ORTHO05D004751 1.5e-30 137.5 77 81.8
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 2.7e-27 126.7 68 86.8
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 5.2e-23 112.5 69 75.4
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 9.8e-22 108.2 67 65.7
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 1.3e-21 107.8 108 50.9
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 6.8e-15 85.5 82 51.2
A06p08350 Brassica napus HOM05D003837 ORTHO05D099682 2.9e-13 80.1 65 60.0
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 1.9e-12 77.4 49 71.4
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 1.9e-12 77.4 49 71.4
AUR62043290 Chenopodium quinoa HOM05D008055 ORTHO05D009927 1.2e-11 74.7 89 48.3
BolC9t54120H Brassica oleracea HOM05D003837 ORTHO05D033622 3.5e-11 73.2 57 63.2
BolC7t40474H Brassica oleracea HOM05D003837 ORTHO05D033622 6.0e-11 72.4 57 61.4
C09p56440 Brassica napus HOM05D003837 ORTHO05D101394 8.1e-08 62.0 50 62.0
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 5.2e-07 59.3 44 59.1


User provided reference genes

Program Settings