Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 1.9e-150 535.8 264 100.0
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 8.4e-143 510.4 270 94.1
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 1.9e-139 499.2 267 92.1
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 8.4e-135 483.8 267 88.0
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 7.1e-134 480.7 267 86.5
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 7.9e-133 477.2 269 85.1
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 3.3e-131 471.9 267 84.6
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 2.1e-130 469.2 267 83.1
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 8.2e-130 467.2 267 83.1
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 1.1e-129 466.8 267 83.9
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 2.9e-127 458.8 269 82.2
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 2.1e-125 452.6 267 82.0
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 3.5e-125 451.8 267 82.0
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 2.3e-124 449.1 267 81.6
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 5.1e-124 448.0 267 81.3
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 8.7e-124 447.2 267 79.8
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 1.1e-123 446.8 267 81.3
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 9.7e-123 443.7 267 80.9
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 9.7e-123 443.7 267 81.3
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 2.0e-120 436.0 267 79.8
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 3.4e-120 435.3 267 78.7
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 4.5e-120 434.9 262 80.2
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 4.5e-120 434.9 267 77.9
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.0e-119 433.7 279 76.3
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 2.2e-119 432.6 267 77.5
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 3.8e-119 431.8 267 77.2
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 6.5e-119 431.0 267 77.5
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 8.5e-119 430.6 267 77.5
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 1.1e-118 430.3 267 77.2
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 1.4e-118 429.9 267 75.7
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 1.9e-118 429.5 267 76.4
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 3.2e-118 428.7 267 77.5
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 3.2e-118 428.7 267 77.2
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 3.2e-118 428.7 268 76.9
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 5.5e-118 427.9 267 77.5
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 9.4e-118 427.2 267 77.2
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 1.2e-117 426.8 267 76.8
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 1.2e-117 426.8 267 76.8
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 2.7e-117 425.6 267 76.0
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 2.7e-117 425.6 267 76.0
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 2.7e-117 425.6 267 76.8
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 3.6e-117 425.2 267 75.3
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 4.6e-117 424.9 267 76.8
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 6.1e-117 424.5 269 75.8
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 6.1e-117 424.5 267 77.9
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 7.9e-117 424.1 267 73.8
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 1.0e-116 423.7 272 77.2
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.0e-116 423.7 269 77.0
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.4e-116 423.3 269 77.0
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 1.4e-116 423.3 268 76.1
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 1.8e-116 422.9 267 75.7
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 1.8e-116 422.9 267 76.4
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 2.3e-116 422.5 267 74.2
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 2.3e-116 422.5 267 74.5
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 3.0e-116 422.2 267 76.4
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 3.9e-116 421.8 267 74.5
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 5.1e-116 421.4 265 75.5
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 5.1e-116 421.4 268 75.0
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 5.1e-116 421.4 267 75.7
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 1.5e-115 419.9 267 74.5
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.5e-115 419.1 267 74.5
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 3.3e-115 418.7 267 73.8
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 3.3e-115 418.7 267 74.2
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 4.3e-115 418.3 269 74.3
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 5.7e-115 417.9 267 74.2
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 7.4e-115 417.5 267 74.9
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 9.7e-115 417.2 267 74.2
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.7e-115 417.2 267 74.2
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 1.3e-114 416.8 267 73.8
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 1.3e-114 416.8 267 76.4
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 1.3e-114 416.8 266 75.2
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 1.7e-114 416.4 266 75.2
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.8e-114 415.6 267 74.2
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 4.8e-114 414.8 268 74.3
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 6.3e-114 414.5 267 73.0
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 6.3e-114 414.5 267 73.8
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 8.2e-114 414.1 266 73.3
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 1.1e-113 413.7 267 73.4
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 1.4e-113 413.3 267 72.3
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 1.8e-113 412.9 268 74.3
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.8e-113 412.9 273 73.3
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 2.4e-113 412.5 267 73.0
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.1e-113 412.1 273 72.9
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 5.3e-113 411.4 267 73.4
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 5.3e-113 411.4 267 73.4
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.1e-113 410.6 273 72.5
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 1.5e-112 409.8 267 73.0
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 2.6e-112 409.1 268 73.5
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 7.7e-112 407.5 268 73.5
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 7.7e-112 407.5 267 72.7
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 1.7e-111 406.4 267 71.9
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 1.7e-111 406.4 267 75.3
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 2.2e-111 406.0 264 75.8
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 6.5e-111 404.4 266 69.5
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 1.4e-110 403.3 260 72.3
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 3.2e-110 402.1 304 67.4
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.2e-110 402.1 267 72.3
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 5.5e-110 401.4 266 69.2
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 2.1e-109 399.4 242 81.4
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 2.7e-109 399.1 267 73.4
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 4.7e-109 398.3 267 71.2
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 1.0e-108 397.1 284 69.4
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 6.7e-108 394.4 267 71.9
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 9.7e-107 390.6 268 71.6
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 2.2e-106 389.4 267 71.5
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 2.8e-106 389.0 267 70.8
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 3.7e-106 388.7 267 70.0
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 6.3e-106 387.9 267 70.4
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 1.1e-105 387.1 267 70.8
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 1.1e-105 387.1 267 70.8
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 1.6e-104 383.3 250 75.6
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 3.5e-104 382.1 267 68.9
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 5.9e-104 381.3 266 69.9
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 1.0e-103 380.6 267 71.2
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 1.0e-103 380.6 267 68.9
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 1.0e-103 380.6 267 68.2
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 8.5e-103 377.5 267 69.3
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 5.5e-102 374.8 267 67.4
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 8.0e-101 370.9 267 67.8
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.0e-100 370.5 265 71.7
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.3e-100 369.4 267 68.2
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 5.2e-100 368.2 268 64.6
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 6.7e-100 367.9 236 74.6
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 8.8e-100 367.5 268 65.3
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.0e-99 366.3 267 67.4
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 9.7e-99 364.0 269 65.1
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 1.3e-98 363.6 267 68.9
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 4.8e-98 361.7 267 66.3
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 6.3e-98 361.3 268 63.8
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 1.8e-97 359.8 266 65.0
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 4.1e-97 358.6 242 71.5
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 7.0e-97 357.8 268 63.8
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 9.1e-97 357.5 212 82.1
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 3.5e-96 355.5 235 74.5
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.9e-96 354.8 275 62.5
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.0e-95 354.0 269 63.9
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.9e-95 352.4 275 62.2
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.9e-95 352.4 269 63.6
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.0e-95 351.7 269 62.8
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.5e-94 350.1 275 62.5
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 2.5e-94 349.4 269 62.5
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.4e-94 347.4 269 62.1
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.5e-91 340.1 249 64.7
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 1.8e-89 333.2 269 61.3
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 2.4e-89 332.8 268 59.7
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 7.7e-88 327.8 268 59.0
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 3.8e-87 325.5 197 78.7
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 1.9e-86 323.2 269 59.5
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 8.8e-84 314.3 215 74.4
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.7e-82 310.1 189 75.1
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 4.9e-82 308.5 293 52.9
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 1.1e-81 307.4 186 76.9
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 1.8e-76 290.0 268 54.9
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 7.0e-65 251.5 127 95.3
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 1.3e-55 220.7 189 57.7
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 9.5e-54 214.5 266 42.5
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.8e-53 213.0 130 74.6
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 7.8e-48 194.9 141 67.4
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 1.1e-46 191.0 271 40.6
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 9.6e-46 188.0 179 55.3
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 7.6e-43 178.3 186 53.8
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 2.8e-37 159.8 107 70.1
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 7.1e-33 145.2 88 77.3
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 2.1e-32 143.7 267 36.0
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 1.3e-31 141.0 274 33.9
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 3.9e-31 139.4 82 78.0
MD09G1245300 Malus domestica HOM05D003837 ORTHO05D004751 9.0e-28 128.3 76 77.6
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 1.2e-27 127.9 102 64.7
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.9e-22 110.5 67 79.1
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 2.1e-21 107.1 67 64.2
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 5.5e-17 92.4 101 46.5
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 9.6e-14 81.6 66 62.1
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 1.3e-13 81.3 82 47.6
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 2.0e-11 73.9 49 67.3
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 2.0e-11 73.9 49 67.3
A06p08350 Brassica napus HOM05D003837 ORTHO05D099682 4.5e-11 72.8 65 55.4
AUR62043290 Chenopodium quinoa HOM05D008055 ORTHO05D009927 2.9e-10 70.1 60 53.3
BolC9t54120H Brassica oleracea HOM05D003837 ORTHO05D033622 3.6e-08 63.2 57 56.1
BolC7t40474H Brassica oleracea HOM05D003837 ORTHO05D033622 6.1e-08 62.4 57 54.4
C09p56440 Brassica napus HOM05D003837 ORTHO05D101394 2.5e-06 57.0 52 53.8
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 9.7e-06 55.1 44 54.5


User provided reference genes

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