Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 9.4e-245 849.7 425 100.0
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 4.1e-240 834.3 425 97.4
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 1.8e-232 808.9 425 93.6
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 3.5e-231 804.7 425 93.4
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 2.2e-225 785.4 425 90.1
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 2.8e-225 785.0 421 90.3
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 1.8e-224 782.3 421 90.3
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 1.1e-221 773.1 425 88.2
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 2.5e-221 771.9 423 89.4
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 7.3e-221 770.4 425 88.2
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 1.2e-220 769.6 425 88.2
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 2.8e-220 768.5 425 88.2
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 3.6e-220 768.1 425 88.2
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 6.1e-220 767.3 425 88.0
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 8.0e-220 766.9 425 89.2
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 3.0e-219 765.0 425 87.8
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 3.0e-219 765.0 422 87.4
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 3.0e-219 765.0 425 87.8
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 6.8e-219 763.8 425 87.5
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 6.8e-219 763.8 425 87.1
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 2.6e-218 761.9 425 87.1
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 2.6e-218 761.9 424 88.2
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.4e-218 761.5 422 88.2
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 5.7e-218 760.8 425 87.3
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 1.3e-217 759.6 425 87.3
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 1.7e-217 759.2 425 87.3
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 3.7e-217 758.1 425 86.8
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 3.2e-216 755.0 422 87.2
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 3.2e-216 755.0 425 86.4
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 7.0e-216 753.8 425 86.8
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 1.6e-215 752.7 425 86.1
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.6e-215 752.7 425 86.4
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 3.9e-214 748.0 417 87.1
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 1.5e-213 746.1 425 84.7
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 1.9e-213 745.7 425 85.6
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.9e-213 745.7 424 85.1
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 3.3e-213 745.0 425 84.7
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 5.6e-213 744.2 425 84.7
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 7.3e-213 743.8 425 84.9
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 9.5e-213 743.4 424 84.9
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 9.5e-213 743.4 425 84.9
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 1.2e-212 743.0 425 84.5
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 3.6e-212 741.5 425 84.5
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.2e-212 740.7 424 84.4
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 1.1e-211 740.0 425 84.5
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 1.1e-211 740.0 449 82.0
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 1.4e-211 739.6 425 85.2
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 1.4e-211 739.6 425 85.2
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 1.4e-211 739.6 425 84.5
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 1.8e-211 739.2 425 85.4
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 1.8e-211 739.2 425 84.7
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 2.3e-211 738.8 425 85.2
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 3.1e-211 738.4 422 84.4
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 4.0e-211 738.0 425 84.9
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 8.9e-211 736.9 425 85.2
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 1.2e-210 736.5 426 85.2
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 1.5e-210 736.1 424 84.2
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 1.5e-210 736.1 425 84.0
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 2.0e-210 735.7 426 84.7
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 2.0e-210 735.7 425 83.8
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 2.0e-210 735.7 425 83.8
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 9.8e-210 733.4 425 84.0
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 9.8e-210 733.4 425 84.0
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 9.8e-210 733.4 425 84.5
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 9.8e-210 733.4 425 84.0
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 2.2e-209 732.3 425 84.5
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 2.2e-209 732.3 425 83.8
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 2.9e-209 731.9 426 84.0
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 1.1e-208 729.9 425 84.2
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 1.4e-208 729.6 425 83.8
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.4e-208 728.8 438 81.5
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 4.1e-208 728.0 425 84.0
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 7.0e-208 727.2 425 84.2
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 7.0e-208 727.2 415 85.3
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 7.0e-208 727.2 425 84.0
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 1.6e-207 726.1 425 82.1
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 2.0e-207 725.7 471 78.1
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 2.7e-207 725.3 420 84.0
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 2.7e-207 725.3 425 83.8
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.7e-207 725.3 414 85.0
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 3.5e-207 724.9 420 83.8
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 2.3e-206 722.2 425 82.6
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 6.6e-206 720.7 425 81.9
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 4.3e-205 718.0 438 82.2
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 7.3e-205 717.2 415 84.3
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 6.2e-204 714.1 425 81.2
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 1.5e-202 709.5 423 80.9
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 2.0e-202 709.1 413 84.3
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 3.4e-202 708.4 424 80.2
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 5.8e-202 707.6 423 80.6
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 1.7e-201 706.1 425 81.4
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-200 703.0 425 79.1
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 1.9e-200 702.6 425 80.0
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 9.2e-200 700.3 424 79.7
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 7.8e-199 697.2 425 78.8
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 3.6e-196 688.3 425 80.7
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 6.2e-196 687.6 420 78.6
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 3.1e-195 685.3 425 80.5
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 6.8e-195 684.1 422 78.0
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 1.3e-193 679.9 425 80.2
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.1e-192 674.9 419 77.8
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 2.7e-191 672.2 425 78.8
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 8.7e-190 667.2 423 75.7
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 1.1e-189 666.8 364 88.7
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 1.9e-189 666.0 423 75.7
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 7.3e-189 664.1 425 77.9
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.4e-187 659.1 425 76.5
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 3.4e-186 655.2 433 76.0
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 9.9e-186 653.7 416 77.9
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 1.3e-185 653.3 423 74.2
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 2.2e-185 652.5 423 74.2
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 6.4e-185 651.0 422 77.7
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 4.2e-184 648.3 413 78.5
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 1.0e-182 643.7 402 80.3
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 1.7e-182 642.9 611 57.4
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 6.6e-182 641.0 418 76.1
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 5.6e-181 637.9 422 73.7
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.8e-180 635.6 415 76.9
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 4.8e-180 634.8 442 72.6
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.4e-179 632.5 475 70.3
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.1e-179 632.1 412 75.0
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.9e-179 630.9 406 75.6
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.8e-177 625.2 412 74.0
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 1.4e-176 623.2 410 74.9
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 9.3e-176 620.5 425 70.4
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.8e-171 606.3 409 73.8
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 9.0e-171 604.0 410 72.7
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 2.6e-170 602.4 340 86.5
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 2.2e-169 599.4 352 81.0
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 4.9e-169 598.2 357 81.8
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 7.1e-168 594.3 339 84.4
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 9.3e-168 594.0 430 69.5
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 1.5e-165 586.6 344 81.1
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.6e-164 583.2 403 71.0
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 2.0e-162 576.2 432 67.1
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 5.5e-160 568.2 418 64.1
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 5.1e-158 561.6 415 69.2
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.1e-155 552.0 399 69.4
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 3.8e-153 545.4 312 84.0
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 1.3e-145 520.4 303 82.8
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.2e-144 515.8 413 65.6
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 3.9e-142 508.8 423 60.0
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 2.6e-138 496.1 442 59.7
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 2.5e-136 489.6 281 83.6
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 4.8e-132 475.3 435 58.2
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 6.3e-132 474.9 286 80.1
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 8.0e-119 431.4 431 52.0
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 4.4e-117 425.6 252 81.0
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 2.3e-113 413.3 234 85.0
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 2.3e-105 386.7 436 47.7
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 4.4e-93 345.9 465 43.4
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 8.9e-86 321.6 171 90.1
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 3.4e-85 319.7 199 78.4
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 1.3e-84 317.8 410 42.7
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 7.6e-77 292.0 162 85.8
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.0e-73 281.6 239 60.7
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 1.2e-69 268.1 157 80.3
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 6.0e-66 255.8 166 75.9
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.6e-58 231.1 254 54.3
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 2.1e-58 230.7 158 75.3
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 3.1e-54 216.9 160 65.6
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 1.9e-35 154.5 96 78.1
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 1.1e-32 145.2 84 82.1
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 1.7e-31 141.4 86 79.1
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 5.9e-29 132.9 233 36.9
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 2.9e-28 130.6 125 57.6
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 4.8e-23 113.2 72 76.4
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 2.0e-21 107.8 129 48.8
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 1.1e-19 102.1 61 78.7
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 2.5e-19 100.9 95 60.0
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 6.1e-18 96.3 55 76.4
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 1.1e-16 92.0 168 36.3
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 3.3e-16 90.5 55 72.7
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 1.1e-14 85.5 230 29.6
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 1.2e-13 82.0 48 87.5
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 2.1e-10 71.2 47 74.5
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 1.0e-09 68.9 110 35.5
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 2.3e-09 67.8 78 42.3
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 6.8e-09 66.2 38 84.2
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 1.5e-08 65.1 42 66.7
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 7.5e-08 62.8 32 78.1
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 9.7e-08 62.4 46 58.7
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 6.3e-07 59.7 30 80.0


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