Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G059200 Phaseolus vulgaris HOM05D006032 ORTHO05D007544 1.5e-147 526.2 269 100.0
VMungo1383G0296 Vigna mungo HOM05D006032 ORTHO05D007544 4.3e-134 481.5 270 92.6
Glyma.18G237400 Glycine max HOM05D006032 ORTHO05D007544 1.1e-129 466.8 269 88.1
Glyma.09G255500 Glycine max HOM05D006032 ORTHO05D007544 1.5e-126 456.4 269 85.5
Ca_00819_v3 Cicer arietinum L. HOM05D006032 ORTHO05D007544 2.5e-110 402.5 272 77.6
arahy.Tifrunner.gnm1.ann1.S0M071 Arachis hypogaea HOM05D006032 ORTHO05D007544 1.6e-109 399.8 273 75.5
arahy.Tifrunner.gnm1.ann1.XQ5AKE Arachis hypogaea HOM05D006032 ORTHO05D007544 2.1e-109 399.4 275 74.9
Lalb_Chr19g0126911 Lupinus albus HOM05D006032 ORTHO05D007544 8.1e-109 397.5 270 75.9
Lj4g0026145 Lotus japonicus HOM05D006032 ORTHO05D007544 2.4e-108 396.0 269 75.5
Psat3g107160 Pisum sativum HOM05D006032 ORTHO05D007544 1.2e-107 393.7 269 75.8
TPR.G22296 Trifolium pratense HOM05D006032 ORTHO05D007544 1.5e-107 393.3 269 76.6
Ciclev10021696m.g Citrus clementina HOM05D006032 ORTHO05D007544 5.4e-105 384.8 267 75.7
Atru.chr5.551 Acer truncatum HOM05D006032 ORTHO05D007544 3.5e-104 382.1 265 73.6
Medtr7g078800 Medicago truncatula HOM05D006032 ORTHO05D007544 3.5e-104 382.1 268 75.7
PGR031G1164 Punica granatum HOM05D006032 ORTHO05D007544 6.6e-103 377.9 265 74.3
GSVIVG01027006001 Vitis vinifera HOM05D006032 ORTHO05D007544 9.6e-102 374.0 268 72.0
CSS0027447 Camellia sinensis var. sinensis HOM05D006032 ORTHO05D007544 1.3e-101 373.6 270 71.1
Manes.01G253200 Manihot esculenta HOM05D006032 ORTHO05D007544 2.8e-101 372.5 263 72.6
Thecc.01G353900 Theobroma cacao HOM05D006032 ORTHO05D007544 3.6e-101 372.1 269 72.9
Hma1.2p1_2961F.1_g330870 Hydrangea macrophylla HOM05D006032 ORTHO05D007544 1.1e-100 370.5 269 72.1
THA.LOC104817034 Tarenaya hassleriana HOM05D006032 ORTHO05D007544 5.3e-100 368.2 270 68.9
COL.COLO4_12764 Corchorus olitorius HOM05D006032 ORTHO05D007544 6.9e-100 367.9 267 71.5
Eucgr.D02319 Eucalyptus grandis HOM05D006032 ORTHO05D007544 4.5e-99 365.2 265 71.3
Cpa.g.sc184.23 Carica papaya HOM05D006032 ORTHO05D007544 5.8e-99 364.8 269 71.4
ClCG05G001320 Citrullus lanatus HOM05D006032 ORTHO05D007544 9.9e-99 364.0 269 71.0
Potri.002G154600 Populus trichocarpa HOM05D006032 ORTHO05D007544 1.7e-98 363.2 272 71.3
Haze_15552 Corylus avellana HOM05D006032 ORTHO05D007544 2.2e-98 362.8 266 70.3
MSTRG.20857 Avicennia marina HOM05D006032 ORTHO05D007544 2.9e-98 362.5 268 69.8
TWI59G0434 Tripterygium wilfordii HOM05D006032 ORTHO05D007544 1.1e-97 360.5 260 71.9
MELO3C006088.2 Cucumis melo HOM05D006032 ORTHO05D007544 1.9e-97 359.8 271 69.7
HanXRQChr06g0170291 Helianthus annuus HOM05D006032 ORTHO05D007544 2.4e-97 359.4 265 69.8
Nitab4.5_0006802g0050 Nicotiana tabacum HOM05D006032 ORTHO05D007544 3.2e-97 359.0 272 69.5
Sopen09g002430 Solanum pennellii HOM05D006032 ORTHO05D007544 3.2e-97 359.0 270 69.3
Sabra02G0122600 Salix brachista HOM05D006032 ORTHO05D007544 4.2e-97 358.6 274 69.7
CsaV3_3G008690 Cucumis sativus L. HOM05D006032 ORTHO05D007544 5.4e-97 358.2 271 69.0
CiPaw.01G065600 Carya illinoinensis HOM05D006032 ORTHO05D007544 7.1e-97 357.8 271 70.1
CANSAT56G0440 Cannabis sativa HOM05D006032 ORTHO05D007544 1.6e-96 356.7 266 69.2
PGSC0003DMG400001748 Solanum tuberosum HOM05D006032 ORTHO05D007544 1.6e-96 356.7 269 68.8
Nitab4.5_0002682g0080 Nicotiana tabacum HOM05D006032 ORTHO05D007544 2.1e-96 356.3 272 69.5
Sed0022476 Sechium edule HOM05D006032 ORTHO05D007544 2.1e-96 356.3 267 68.9
Nn1g01650 Nelumbo nucifera HOM05D006032 ORTHO05D007544 2.7e-96 355.9 260 69.2
Cfa003882 Carpinus fangiana HOM05D006032 ORTHO05D007544 3.5e-96 355.5 266 69.2
Cc02_g38440 Coffea canephora HOM05D006032 ORTHO05D007544 6.0e-96 354.8 274 69.0
CARHR249010 Cardamine hirsuta HOM05D006032 ORTHO05D007544 1.0e-95 354.0 269 68.0
SalBow3G2277 Salvia bowleyana HOM05D006032 ORTHO05D007544 6.7e-95 351.3 271 66.1
Sp6g00830 Schrenkiella parvula HOM05D006032 ORTHO05D007544 6.7e-95 351.3 269 67.7
Aqoxy7G00233 Aquilegia oxysepala HOM05D006032 ORTHO05D007544 8.7e-95 350.9 260 68.1
BcaB01g02282 Brassica carinata HOM05D006032 ORTHO05D007544 1.1e-94 350.5 268 67.9
BcaB01g02152 Brassica carinata HOM05D006032 ORTHO05D007544 1.9e-94 349.7 267 67.8
Thhalv10028885m.g Eutrema salsugineum HOM05D006032 ORTHO05D007544 1.9e-94 349.7 269 66.9
C03p38990 Brassica napus HOM05D006032 ORTHO05D007544 4.3e-94 348.6 267 68.5
ECA236G4677 Erigeron canadensis HOM05D006032 ORTHO05D007544 4.3e-94 348.6 264 67.0
Oeu054338.1 Olea europaea HOM05D006032 ORTHO05D007544 4.3e-94 348.6 268 68.3
BcaC01g06855 Brassica carinata HOM05D006032 ORTHO05D007544 7.4e-94 347.8 267 67.8
BolC3t16171H Brassica oleracea HOM05D006032 ORTHO05D007544 7.4e-94 347.8 267 67.8
Lsat_1_v5_gn_7_3801 Lactuca sativa HOM05D006032 ORTHO05D007544 9.6e-94 347.4 266 68.0
Prupe.2G175800 Prunus persica HOM05D006032 ORTHO05D007544 1.6e-93 346.7 265 69.8
Gohir.D07G146100 Gossypium hirsutum HOM05D006032 ORTHO05D007544 2.1e-93 346.3 272 68.4
Gorai.001G158300 Gossypium raimondii HOM05D006032 ORTHO05D007544 2.1e-93 346.3 272 68.4
Carub.0006s3637 Capsella rubella HOM05D006032 ORTHO05D007544 4.8e-93 345.1 270 67.0
Gohir.A07G140700 Gossypium hirsutum HOM05D006032 ORTHO05D007544 4.8e-93 345.1 272 68.4
MD01G1069800 Malus domestica HOM05D006032 ORTHO05D007544 4.8e-93 345.1 265 70.2
AT4G01310 Arabidopsis thaliana HOM05D006032 ORTHO05D007544 6.2e-93 344.7 268 67.2
CAN.G1091.3 Capsicum annuum HOM05D006032 ORTHO05D007544 6.2e-93 344.7 269 67.7
BcaC04g24141 Brassica carinata HOM05D006032 ORTHO05D007544 8.1e-93 344.4 268 67.2
Rhsim12G0138500 Rhododendron simsii HOM05D006032 ORTHO05D007544 8.1e-93 344.4 270 67.4
AL6G52090 Arabidopsis lyrata HOM05D006032 ORTHO05D007544 1.1e-92 344.0 268 66.8
QL04p055082 Quercus lobata HOM05D006032 ORTHO05D007544 1.8e-92 343.2 265 67.5
DCAR_006944 Daucus carota HOM05D006032 ORTHO05D007544 2.4e-92 342.8 266 68.0
Migut.B01790 Erythranthe guttata HOM05D006032 ORTHO05D007544 3.1e-92 342.4 270 65.9
Lj7A509T108 Lonicera japonica HOM05D006032 ORTHO05D007544 3.1e-92 342.4 266 65.8
MD07G1132700 Malus domestica HOM05D006032 ORTHO05D007544 1.5e-91 340.1 265 69.8
TAR629G0912 Trochodendron aralioides HOM05D006032 ORTHO05D007544 9.9e-91 337.4 243 70.4
Sc01g0003280 Simmondsia chinensis HOM05D006032 ORTHO05D007544 3.8e-90 335.5 262 66.4
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 1.1e-89 334.0 245 68.6
SGA_v2.0_scaffold95G28814 Striga asiatica HOM05D006032 ORTHO05D007544 1.1e-89 334.0 276 63.8
PSO782G5129 Papaver somniferum HOM05D006032 ORTHO05D007544 1.4e-89 333.6 269 65.1
RcHm_v2.0_Chr1g0357301 Rosa chinensis HOM05D006032 ORTHO05D007544 2.4e-89 332.8 261 66.7
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 7.1e-89 331.3 251 67.7
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 7.1e-89 331.3 251 67.7
AUR62022608 Chenopodium quinoa HOM05D006032 ORTHO05D007544 7.1e-89 331.3 265 65.7
FAN10G0977 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.2e-88 330.5 265 66.4
FAN10G2244 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.2e-88 330.5 265 66.4
AUR62004402 Chenopodium quinoa HOM05D006032 ORTHO05D007544 1.6e-88 330.1 265 65.7
FAN06G2046 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.6e-88 330.1 265 66.8
FAN06G3864 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.6e-88 330.1 265 66.8
PSO478G3538 Papaver somniferum HOM05D006032 ORTHO05D007544 2.1e-88 329.7 241 68.0
FvH4_7g15110 Fragaria vesca HOM05D006032 ORTHO05D007544 4.6e-88 328.6 265 66.4
ATR0661G584 Amborella trichopoda HOM05D006032 ORTHO05D007544 6.0e-88 328.2 228 70.6
CDE04G3178 Ceratophyllum demersum HOM05D006032 ORTHO05D007544 1.0e-87 327.4 232 71.1
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 1.3e-87 327.0 253 67.6
FAN03G1341 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.3e-87 327.0 265 66.0
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 1.8e-87 326.6 253 67.6
CDE12G0723 Ceratophyllum demersum HOM05D006032 ORTHO05D007544 3.0e-87 325.9 235 70.6
EL10Ac1g00366 Beta vulgaris HOM05D006032 ORTHO05D007544 3.4e-83 312.4 302 57.0
Hund27251 Selenicereus undatus HOM05D006032 ORTHO05D007544 3.2e-81 305.8 238 68.5
HPP92_025634 Vanilla planifolia HOM05D006032 ORTHO05D007544 3.2e-81 305.8 218 68.8
unitig_22.g5344 Utricularia gibba HOM05D003213 ORTHO05D003693 2.1e-80 303.1 196 74.5
Potri.014G089100 Populus trichocarpa HOM05D006032 ORTHO05D007544 4.6e-80 302.0 264 62.1
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 5.7e-78 295.0 260 60.8
Zm00001eb001840 Zea mays HOM05D006032 ORTHO05D007544 8.2e-77 291.2 220 65.9
Os03g0125000 Oryza sativa ssp. japonica HOM05D006032 ORTHO05D007544 1.1e-76 290.8 223 64.6
Peaxi162Scf00815g00338 Petunia axillaris HOM05D006032 ORTHO05D007544 2.4e-76 289.7 185 77.3
vmacro20901 Vaccinium macrocarpon HOM05D006032 ORTHO05D007544 5.0e-74 282.0 271 59.0
A03p31970 Brassica napus HOM05D006032 ORTHO05D007544 6.3e-69 265.0 199 69.3
BraA03t12369Z Brassica rapa HOM05D006032 ORTHO05D007544 6.3e-69 265.0 199 69.3
MBI04_g41504_MAGBIO Magnolia biondii HOM05D006032 ORTHO05D007544 2.0e-67 260.0 263 54.8
Dinv32511 Davidia involucrata HOM05D006032 ORTHO05D007544 2.6e-67 259.6 243 58.0
Mapoly0001s0334 Marchantia polymorpha HOM05D006032 ORTHO05D007544 5.5e-65 251.9 247 51.0
FAN01G2970 Fragaria x ananassa HOM05D006032 ORTHO05D007544 6.1e-64 248.4 194 66.0
AagrBONN_evm.TU.Sc2ySwM_228.1445 Anthoceros agrestis HOM05D006032 ORTHO05D007544 2.8e-61 239.6 191 57.6
Pp3c1_25850 Physcomitrium patens HOM05D006032 ORTHO05D007544 3.7e-61 239.2 220 51.4
Pp3c2_17110 Physcomitrium patens HOM05D006032 ORTHO05D007544 4.8e-61 238.8 220 51.4
Solyc09g007560.4 Solanum lycopersicum HOM05D006032 ORTHO05D007544 3.1e-60 236.1 178 70.2
SMO358G0099 Selaginella moellendorffii HOM05D006032 ORTHO05D007544 9.1e-60 234.6 180 60.0
SEGI_08351 Sequoiadendron giganteum HOM05D006032 ORTHO05D007544 1.3e-50 204.1 138 68.8
MSTRG.17292 Avicennia marina HOM05D006032 ORTHO05D007544 5.5e-49 198.7 129 74.4
Haze_27649 Corylus avellana HOM05D006032 ORTHO05D007544 2.5e-41 173.3 153 52.9
Rhsim01G0165400 Rhododendron simsii HOM05D006032 ORTHO05D007544 4.7e-40 169.1 162 59.3
COL.COLO4_27391 Corchorus olitorius HOM05D006032 ORTHO05D007544 8.0e-40 168.3 115 73.0
Cfa021143 Carpinus fangiana HOM05D006032 ORTHO05D001488 3.4e-38 162.9 205 41.0
Sabra14G0064700 Salix brachista HOM05D006032 ORTHO05D007544 1.6e-35 154.1 115 67.0
C02p38190 Brassica napus HOM05D006032 ORTHO05D007544 5.5e-33 145.6 268 39.2
BolC2t09834H Brassica oleracea HOM05D006032 ORTHO05D007544 5.5e-33 145.6 268 39.2
BcaC03g16053 Brassica carinata HOM05D006032 ORTHO05D007544 9.5e-33 144.8 268 39.2
Actinidia02824 Actinidia chinensis HOM05D006032 ORTHO05D007544 4.9e-29 132.5 81 80.2
Nitab4.5_0000681g0050 Nicotiana tabacum HOM05D006032 ORTHO05D007544 3.5e-27 126.3 76 84.2
SMO196G0051 Selaginella moellendorffii HOM05D006032 ORTHO05D007544 1.9e-25 120.6 173 38.2
VMungo1309G2152 Vigna mungo HOM05D006032 ORTHO05D007544 8.9e-23 111.7 70 81.4
Nitab4.5_0000681g0060 Nicotiana tabacum HOM05D006032 ORTHO05D007544 8.6e-18 95.1 65 69.2
VMungo0647G0507 Vigna mungo HOM05D006032 ORTHO05D007227 1.1e-17 94.7 66 78.8
Cfa024600 Carpinus fangiana HOM05D006032 ORTHO05D122942 5.2e-15 85.9 242 27.3
Psat2g092280 Pisum sativum HOM05D006032 ORTHO05D007544 9.8e-14 81.6 60 70.0
Rhsim12G0138600 Rhododendron simsii HOM05D006032 ORTHO05D007544 2.0e-11 73.9 90 53.3
Dinv43855 Davidia involucrata HOM05D006032 ORTHO05D007544 5.0e-10 69.3 39 79.5
unitig_8.g3788 Utricularia gibba HOM05D006032 ORTHO05D007544 1.8e-07 60.8 102 38.2
FvH4_5g19211 Fragaria vesca HOM05D006032 ORTHO05D197553 9.9e-06 55.1 56 58.9


User provided reference genes

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