Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 3.6e-312 1073.5 522 100.0
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 4.6e-294 1013.8 522 93.7
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 7.9e-278 959.9 522 89.5
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 2.5e-271 938.3 523 88.5
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 2.1e-254 882.1 528 81.8
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 9.1e-250 866.7 527 80.3
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 4.7e-246 854.4 525 80.0
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 1.8e-242 842.4 526 77.9
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 9.2e-242 840.1 525 78.3
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 3.5e-233 811.6 534 76.2
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 4.6e-233 811.2 531 76.5
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.3e-232 809.7 456 83.8
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 9.2e-226 786.9 530 72.3
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 3.0e-224 781.9 526 71.9
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 6.6e-224 780.8 472 78.4
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 7.3e-223 777.3 459 79.3
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 8.9e-221 770.4 525 71.0
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 2.0e-220 769.2 521 70.8
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 5.8e-220 767.7 482 76.1
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 7.5e-220 767.3 522 70.7
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 4.9e-219 764.6 455 77.6
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 1.1e-218 763.5 455 78.0
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 1.9e-218 762.7 526 71.1
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.4e-218 761.1 470 76.8
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 5.4e-218 761.1 522 70.7
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 5.4e-218 761.1 466 76.0
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 1.6e-217 759.6 465 77.0
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 3.5e-217 758.4 527 70.4
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 4.6e-217 758.1 522 70.5
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 6.0e-217 757.7 453 79.0
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.0e-216 756.9 465 76.8
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 1.0e-216 756.9 473 75.1
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 3.9e-216 755.0 526 69.8
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.5e-215 753.1 512 70.7
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 3.3e-215 751.9 479 73.9
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 4.3e-215 751.5 524 69.3
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.2e-214 750.0 467 75.4
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 2.1e-214 749.2 520 69.6
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 2.8e-214 748.8 480 72.9
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 8.1e-214 747.3 491 71.7
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 8.1e-214 747.3 500 71.2
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.8e-213 746.1 527 68.7
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 2.4e-213 745.7 458 76.9
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 2.4e-213 745.7 480 73.3
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 3.1e-213 745.3 474 74.1
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 3.1e-213 745.3 517 70.4
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 3.1e-213 745.3 465 75.3
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 4.0e-213 745.0 474 74.3
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 4.0e-213 745.0 524 68.5
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 5.2e-213 744.6 458 75.8
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 8.9e-213 743.8 474 73.8
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 8.9e-213 743.8 488 71.5
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 2.0e-212 742.7 520 70.2
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 2.6e-212 742.3 479 72.7
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 3.4e-212 741.9 458 75.1
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 4.4e-212 741.5 482 72.8
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 9.9e-212 740.3 500 70.8
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.3e-211 740.0 484 72.7
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 1.7e-211 739.6 557 67.0
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 2.2e-211 739.2 520 69.4
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 2.9e-211 738.8 522 69.9
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 3.8e-211 738.4 498 71.1
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 4.9e-211 738.0 464 74.8
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 4.9e-211 738.0 469 74.2
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 1.1e-210 736.9 504 71.0
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 1.1e-210 736.9 493 71.8
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.4e-210 736.5 458 75.1
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 4.1e-210 734.9 488 71.9
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 9.2e-210 733.8 470 73.0
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.6e-209 733.0 504 70.2
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 2.1e-209 732.6 484 72.1
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 2.7e-209 732.3 524 68.7
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.6e-208 727.6 509 69.0
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.9e-207 726.1 503 69.6
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 9.6e-207 723.8 499 69.1
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 1.2e-206 723.4 462 71.9
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.1e-205 720.3 473 72.1
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 6.9e-205 717.6 453 74.2
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.3e-203 713.4 496 70.6
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 4.9e-203 711.4 495 68.7
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 8.4e-203 710.7 465 71.0
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 2.4e-202 709.1 489 68.5
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.4e-202 708.0 458 72.7
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 4.6e-201 704.9 458 72.9
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 7.8e-201 704.1 516 66.3
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 3.3e-199 698.7 454 70.9
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 5.6e-199 698.0 450 71.8
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 4.8e-198 694.9 495 67.7
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 2.4e-197 692.6 452 72.6
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 5.6e-191 671.4 425 74.4
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 3.8e-187 658.7 459 68.2
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 1.9e-186 656.4 483 65.2
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 9.0e-181 637.5 495 60.6
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 1.2e-180 637.1 463 67.0
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 1.8e-173 613.2 459 65.1
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 4.1e-173 612.1 454 62.6
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.5e-172 610.1 490 61.4
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 2.6e-172 609.4 483 59.6
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.2e-169 600.5 366 77.3
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 7.9e-169 597.8 474 60.5
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 8.8e-168 594.3 503 59.4
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.4e-160 570.5 430 64.9
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 2.2e-158 563.1 382 71.7
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.6e-140 503.8 479 56.6
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 1.5e-135 487.3 362 66.3
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 3.7e-126 456.1 450 50.9
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 6.8e-120 435.3 306 69.6
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 7.8e-116 421.8 475 47.2
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 3.6e-105 386.3 269 68.0
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 4.9e-102 375.9 476 43.9
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.1e-84 317.4 452 40.9
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 5.7e-42 176.4 100 79.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 1.5e-39 168.3 226 39.8
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 1.3e-33 148.7 96 74.0
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 1.3e-33 148.7 96 74.0
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 1.3e-33 148.7 96 74.0
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 1.3e-33 148.7 96 74.0
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 2.4e-24 117.9 280 30.7
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 5.0e-22 110.2 85 61.2
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 1.6e-15 88.6 64 65.6
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 8.9e-11 72.8 43 81.4
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 2.0e-10 71.6 94 50.0
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 2.4e-08 64.7 40 72.5
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.6e-07 62.0 38 84.2
BcaC08g45232 Brassica carinata HOM05D000289 ORTHO05D000208 6.6e-06 56.6 48 52.1


User provided reference genes

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