Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 2.4e-157 558.9 304 100.0
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.5e-143 513.1 305 94.1
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 1.9e-130 469.5 313 82.1
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 2.1e-129 466.1 312 81.7
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.1e-117 427.2 310 73.2
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 7.7e-116 421.0 260 81.9
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 5.0e-115 418.3 257 83.7
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 1.5e-114 416.8 304 73.7
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 9.4e-114 414.1 312 71.2
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.8e-109 399.8 305 70.2
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 5.4e-109 398.3 260 77.3
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 5.4e-109 398.3 260 79.6
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.6e-108 396.7 260 77.3
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 3.5e-108 395.6 260 77.3
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 4.5e-108 395.2 305 72.1
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 7.7e-108 394.4 305 70.5
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 1.3e-107 393.7 325 68.6
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 1.3e-107 393.7 260 76.2
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 2.9e-107 392.5 301 67.1
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 1.9e-106 389.8 260 76.5
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 3.3e-106 389.0 259 74.9
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 7.2e-106 387.9 299 67.9
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 9.5e-106 387.5 260 74.6
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.6e-105 386.7 330 64.8
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 1.8e-104 383.3 306 67.0
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 1.2e-103 380.6 263 73.8
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.2e-103 380.6 260 72.3
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 1.5e-103 380.2 320 65.6
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.2e-102 376.3 259 75.3
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.2e-102 376.3 303 66.7
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 1.1e-101 374.0 235 79.1
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 4.1e-101 372.1 258 72.1
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 5.4e-101 371.7 256 72.3
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 7.0e-101 371.3 258 71.3
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.6e-100 370.2 258 70.9
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 2.3e-99 366.3 260 70.4
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 6.6e-99 364.8 262 70.6
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 8.6e-99 364.4 260 70.0
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 8.6e-99 364.4 258 69.8
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 2.5e-98 362.8 261 68.6
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 2.5e-98 362.8 255 71.4
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 3.3e-98 362.5 261 69.0
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 7.3e-98 361.3 272 72.1
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 9.5e-98 360.9 262 68.7
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 1.2e-97 360.5 261 67.8
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.6e-97 360.1 232 76.3
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 1.6e-97 360.1 258 69.0
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.6e-97 360.1 227 77.5
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 2.8e-97 359.4 305 61.6
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 8.0e-97 357.8 257 72.0
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.8e-96 356.7 273 66.3
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 2.3e-96 356.3 259 70.3
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 4.0e-96 355.5 311 62.1
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.5e-95 353.6 260 65.8
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 2.0e-95 353.2 260 67.7
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 2.6e-95 352.8 263 68.1
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 3.4e-95 352.4 295 62.7
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 3.4e-95 352.4 260 68.5
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 3.4e-95 352.4 316 59.2
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 5.8e-95 351.7 249 72.3
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 5.8e-95 351.7 260 67.3
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.3e-94 350.5 260 68.1
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 2.2e-94 349.7 258 67.4
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 2.9e-94 349.4 255 66.7
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 2.9e-94 349.4 260 67.3
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 3.7e-94 349.0 263 66.9
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 4.9e-94 348.6 251 68.9
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 4.1e-93 345.5 225 77.3
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 1.2e-92 344.0 257 67.7
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 1.2e-92 344.0 277 62.8
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 4.6e-92 342.0 290 61.7
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 7.8e-92 341.3 261 69.3
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 1.0e-91 340.9 254 67.3
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 2.3e-91 339.7 257 66.1
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 3.0e-91 339.3 257 66.5
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 3.0e-91 339.3 244 69.3
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 3.9e-91 339.0 257 66.1
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 5.0e-91 338.6 228 74.1
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 6.6e-91 338.2 258 66.7
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 8.6e-91 337.8 257 66.9
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 1.9e-90 336.7 256 66.0
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 1.9e-90 336.7 256 66.0
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 4.3e-90 335.5 257 65.4
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 9.5e-90 334.3 256 65.6
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 1.2e-89 334.0 257 65.4
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 3.1e-88 329.3 228 72.4
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 5.8e-87 325.1 305 60.3
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 9.8e-87 324.3 259 64.1
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 6.4e-86 321.6 257 65.4
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 9.2e-85 317.8 202 75.7
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 1.2e-84 317.4 261 63.2
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 3.0e-83 312.8 260 65.4
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 7.3e-82 308.1 229 67.2
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.2e-81 307.4 229 67.2
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.4e-80 303.9 229 66.8
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.5e-79 300.4 256 62.5
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 9.9e-79 297.7 227 66.5
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 5.4e-77 292.0 287 55.7
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 7.1e-77 291.6 300 55.7
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 5.6e-74 282.0 179 77.7
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.5e-71 273.9 247 54.3
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 3.8e-70 269.2 229 62.4
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 1.7e-67 260.4 248 54.8
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 4.3e-66 255.8 278 54.0
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 9.6e-66 254.6 260 52.3
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 2.2e-62 243.4 251 54.2
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.6e-57 227.3 234 50.4
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.9e-53 213.8 148 73.0
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.3e-51 207.6 180 60.6
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 6.2e-49 198.7 260 46.2
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 1.3e-25 121.3 224 37.1
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 2.0e-23 114.0 122 53.3
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 6.5e-22 109.0 89 65.2
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 1.8e-19 100.9 228 31.1
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 5.9e-15 85.9 60 68.3
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 5.9e-15 85.9 60 68.3
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 2.8e-09 67.0 229 27.1


User provided reference genes

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