Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 1.6e-169 599.4 301 100.0
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 4.7e-158 561.2 302 93.4
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 1.4e-138 496.5 301 84.4
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 1.5e-135 486.5 301 83.4
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 7.4e-127 457.6 294 78.9
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 3.7e-126 455.3 296 77.7
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 1.2e-124 450.3 290 77.6
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.5e-122 442.6 295 76.6
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 7.9e-121 437.6 302 77.2
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.0e-120 437.2 309 74.8
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.3e-118 430.3 292 74.7
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 6.5e-115 417.9 299 71.6
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 1.4e-114 416.8 299 71.9
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 4.2e-114 415.2 299 71.6
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.4e-112 410.2 299 70.6
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 8.8e-112 407.5 302 70.5
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.1e-111 407.1 299 70.9
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 1.9e-111 406.4 304 68.1
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.5e-111 406.0 297 69.7
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 2.5e-111 406.0 300 67.3
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 1.1e-109 400.6 311 68.5
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 5.9e-108 394.8 310 66.1
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 5.9e-108 394.8 305 67.9
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 1.7e-107 393.3 300 66.7
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 5.0e-107 391.7 266 71.4
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 5.0e-107 391.7 302 68.2
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 8.5e-107 391.0 301 67.8
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 1.9e-106 389.8 297 68.0
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 3.2e-106 389.0 284 69.0
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 4.2e-106 388.7 308 67.2
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 9.4e-106 387.5 284 68.7
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 1.2e-105 387.1 292 69.5
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 1.2e-105 387.1 307 66.4
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 2.1e-105 386.3 284 68.3
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.7e-105 386.0 295 67.5
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 4.7e-105 385.2 300 68.0
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 6.1e-105 384.8 285 68.4
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 1.8e-104 383.3 299 67.2
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 3.9e-104 382.1 293 67.6
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 8.8e-104 380.9 308 65.9
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 8.8e-104 380.9 292 66.4
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 1.5e-103 380.2 287 67.6
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 7.4e-103 377.9 271 67.2
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 1.3e-102 377.1 302 65.2
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 1.7e-102 376.7 298 65.1
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 2.8e-102 375.9 274 66.4
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 2.8e-102 375.9 283 65.4
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 8.2e-102 374.4 278 66.9
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 8.2e-102 374.4 327 62.1
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 9.1e-101 370.9 271 66.1
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.5e-100 370.2 280 64.3
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 2.6e-100 369.4 319 63.6
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 3.4e-100 369.0 265 69.8
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 3.4e-100 369.0 307 63.5
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 4.5e-100 368.6 278 66.2
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 5.9e-100 368.2 296 67.2
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.0e-99 367.5 277 64.3
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 1.0e-99 367.5 301 64.8
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 6.5e-99 364.8 295 66.1
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.1e-98 364.0 293 62.8
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 1.1e-98 364.0 298 64.8
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.5e-98 361.7 319 61.4
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.2e-97 360.5 270 65.6
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 2.1e-97 359.8 296 63.5
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 2.7e-97 359.4 304 63.8
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 3.6e-97 359.0 299 63.5
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 8.0e-97 357.8 319 60.8
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 8.0e-97 357.8 304 63.5
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 3.9e-96 355.5 296 62.8
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 5.2e-96 355.1 288 64.6
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 5.2e-96 355.1 291 67.0
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 8.8e-96 354.4 283 66.8
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 1.5e-95 353.6 300 62.3
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 2.0e-95 353.2 269 63.9
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 2.0e-95 353.2 328 58.8
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 5.7e-95 351.7 307 59.9
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 7.4e-95 351.3 302 64.9
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 7.4e-95 351.3 297 61.3
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.3e-93 345.1 327 58.1
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.2e-92 344.0 291 63.2
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 1.2e-92 344.0 275 64.4
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 3.5e-92 342.4 303 62.4
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 2.5e-90 336.3 297 57.9
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 9.4e-90 334.3 306 59.8
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 3.3e-87 325.9 274 63.1
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 4.4e-87 325.5 292 59.6
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.7e-86 323.6 294 59.5
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 3.8e-83 312.4 311 55.9
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.1e-82 310.8 293 57.3
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 1.1e-82 310.8 303 59.4
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 1.2e-81 307.4 291 60.1
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 1.6e-81 307.0 299 56.5
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 2.7e-81 306.2 291 58.4
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 6.8e-80 301.6 287 57.5
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.5e-79 300.4 249 64.3
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 7.2e-74 281.6 196 71.9
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 2.1e-73 280.0 303 51.8
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 7.5e-71 271.6 225 59.1
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 7.5e-71 271.6 295 51.9
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.2e-68 264.2 192 66.7
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.0e-68 263.5 179 71.5
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 3.9e-59 232.6 302 48.0
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 6.6e-59 231.9 181 65.7
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 5.8e-55 218.8 303 43.9
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 7.5e-55 218.4 141 71.6
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 2.9e-54 216.5 201 57.7
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 3.2e-53 213.0 163 66.3
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 1.2e-49 201.1 130 77.7
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 2.3e-48 196.8 210 51.9
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.5e-47 194.1 175 61.7
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.7e-46 190.7 294 39.8
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 2.2e-46 190.3 159 62.9
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 2.9e-46 189.9 307 40.1
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 4.9e-46 189.1 298 42.6
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 9.2e-45 184.9 279 40.1
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 8.6e-43 178.3 157 58.0
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.8e-40 170.6 145 62.8
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.7e-35 154.1 105 75.2
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 8.7e-35 151.8 138 60.1
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.5e-34 151.0 154 55.8
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 1.9e-34 150.6 105 74.3
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 8.1e-33 145.2 89 75.3
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 3.4e-23 113.2 80 71.2
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 5.8e-23 112.5 122 53.3
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 8.4e-22 108.6 290 36.9
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 2.1e-20 104.0 103 57.3
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.0e-19 101.7 85 67.1
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 7.4e-18 95.5 103 58.3
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 1.3e-17 94.7 110 48.2
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 2.6e-15 87.0 273 29.7
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 3.4e-15 86.7 96 54.2
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 7.9e-12 75.5 82 50.0
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 9.0e-08 62.0 177 29.4


User provided reference genes

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