Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G048466 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 2.1e-42 175.3 86 100.0
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 5.3e-30 134.0 81 85.2
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 3.2e-27 124.8 81 80.2
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 8.0e-26 120.2 81 74.1
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 1.9e-19 99.0 81 66.7
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 1.9e-19 99.0 81 66.7
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 9.4e-19 96.7 80 63.8
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 1.6e-18 95.9 79 60.8
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 8.0e-18 93.6 83 62.7
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 1.0e-17 93.2 74 66.2
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 1.4e-17 92.8 79 57.0
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 2.3e-17 92.0 83 56.6
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 6.8e-17 90.5 77 63.6
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 4.4e-16 87.8 83 54.2
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 5.7e-16 87.4 80 56.2
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 9.8e-16 86.7 81 55.6
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 2.2e-15 85.5 80 57.5
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 1.4e-14 82.8 80 53.8
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 2.0e-13 79.0 81 51.9
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 3.5e-13 78.2 80 53.8
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 1.7e-12 75.9 81 50.6
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 1.7e-12 75.9 80 51.2
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 1.5e-11 72.8 81 50.6
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 1.9e-11 72.4 81 48.1
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 1.9e-11 72.4 79 50.6
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 2.5e-11 72.0 81 50.6
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 2.5e-11 72.0 67 53.7
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 7.2e-11 70.5 84 50.0
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 9.5e-11 70.1 81 50.6
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 2.1e-10 68.9 70 55.7
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 2.8e-10 68.6 79 45.6
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 2.8e-10 68.6 83 49.4
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 3.6e-10 68.2 83 48.2
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 1.8e-09 65.9 83 48.2
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 3.0e-09 65.1 85 44.7
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 4.0e-09 64.7 50 58.0
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 4.0e-09 64.7 80 43.8
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 6.8e-09 63.9 46 63.0
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 8.9e-09 63.5 83 43.4
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 8.9e-09 63.5 83 42.2
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 8.9e-09 63.5 82 42.7
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 1.5e-08 62.8 83 44.6
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 2.0e-08 62.4 80 42.5
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 1.7e-07 59.3 81 48.1
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 8.3e-07 57.0 84 42.9
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 1.8e-06 55.8 81 45.7


User provided reference genes

Program Settings