Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 7.4e-130 468.8 699 100.0
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 1.7e-102 377.9 696 93.2
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 2.4e-88 330.9 698 89.1
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 3.4e-66 257.3 696 83.0
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 5.8e-66 256.5 708 83.5
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 9.0e-59 232.6 651 87.4
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 4.4e-58 230.3 655 87.0
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 3.2e-56 224.2 705 82.6
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 3.9e-54 217.2 626 88.5
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.6e-52 211.8 674 84.6
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 1.6e-47 195.3 680 81.8
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 4.6e-47 193.7 667 84.0
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 1.4e-43 182.2 657 80.4
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 5.3e-43 180.3 646 84.8
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 2.0e-42 178.3 647 84.2
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 5.8e-42 176.8 657 81.0
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 7.6e-42 176.4 644 84.5
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 6.0e-39 166.8 650 76.3
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 1.3e-38 165.6 648 83.6
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 2.3e-38 164.9 647 83.6
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 2.3e-38 164.9 647 82.8
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 2.3e-38 164.9 647 82.8
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 3.9e-38 164.1 707 78.8
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 5.1e-38 163.7 679 70.8
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 1.1e-37 162.5 663 81.9
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 1.5e-37 162.2 663 81.4
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 7.4e-37 159.8 134 63.4
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 7.4e-37 159.8 143 57.3
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 1.6e-36 158.7 650 75.4
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 1.6e-36 158.7 684 69.2
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 2.1e-36 158.3 189 51.3
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 2.1e-36 158.3 659 75.6
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 3.7e-36 157.5 140 59.3
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 3.7e-36 157.5 166 52.4
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.7e-36 157.5 166 52.4
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 3.7e-36 157.5 713 73.4
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 4.8e-36 157.1 685 79.6
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 4.8e-36 157.1 191 51.8
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 6.2e-36 156.8 686 74.6
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 8.2e-36 156.4 647 83.2
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 1.1e-35 156.0 188 50.0
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 3.1e-35 154.5 176 51.1
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 4.0e-35 154.1 167 52.7
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 4.0e-35 154.1 145 57.9
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.2e-34 152.5 701 65.5
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 3.4e-34 151.0 171 51.5
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 3.4e-34 151.0 171 51.5
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 4.5e-34 150.6 133 57.9
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 5.8e-34 150.2 137 57.7
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.6e-34 149.8 133 57.1
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 7.6e-34 149.8 139 56.8
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.0e-33 149.4 133 57.1
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 1.3e-33 149.1 166 51.2
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 1.3e-33 149.1 166 51.2
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 2.2e-33 148.3 140 55.7
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 2.9e-33 147.9 670 80.9
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 2.9e-33 147.9 690 73.3
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.8e-33 147.5 690 73.2
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 5.0e-33 147.1 166 50.6
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 6.5e-33 146.7 690 61.9
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 8.4e-33 146.4 173 49.7
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 1.4e-32 145.6 649 80.9
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 2.5e-32 144.8 133 57.1
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 4.2e-32 144.1 167 49.7
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 5.5e-32 143.7 649 80.7
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 9.3e-32 142.9 179 49.7
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 1.6e-31 142.1 689 78.7
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.1e-31 141.7 98 72.4
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 2.7e-31 141.4 649 80.7
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.5e-31 141.0 126 56.3
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 7.9e-31 139.8 685 77.1
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 1.0e-30 139.4 635 83.0
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 1.8e-30 138.7 142 53.5
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.0e-30 137.9 693 65.5
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 6.7e-30 136.7 156 52.6
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 1.5e-29 135.6 167 49.1
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 2.5e-29 134.8 116 57.8
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 9.7e-29 132.9 165 46.7
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.8e-27 128.6 159 47.8
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 2.4e-27 128.3 94 67.0
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 5.3e-27 127.1 96 66.7
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 5.3e-27 127.1 161 45.3
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 1.2e-26 125.9 145 46.2
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 1.5e-26 125.6 119 55.5
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 2.6e-26 124.8 167 47.3
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.0e-25 122.9 132 50.0
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 5.0e-25 120.6 136 48.5
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 3.2e-24 117.9 702 74.9
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 5.5e-24 117.1 116 50.9
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 7.2e-24 116.7 81 71.6
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.2e-23 115.9 93 59.1
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 2.7e-23 114.8 97 59.8
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 3.6e-23 114.4 97 58.8
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.8e-22 112.1 86 60.5
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 1.1e-21 109.4 72 76.4
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.7e-21 107.1 86 55.8
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.7e-20 104.4 137 43.1
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 4.8e-20 104.0 137 43.1
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 8.2e-20 103.2 139 38.1
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 1.8e-19 102.1 109 51.4
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 3.1e-19 101.3 72 68.1
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 4.1e-19 100.9 124 46.0
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 6.9e-19 100.1 138 42.0
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 6.9e-19 100.1 78 67.9
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 5.9e-18 97.1 94 58.5
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 5.9e-18 97.1 94 58.5
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 3.2e-16 91.3 97 46.4
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.0e-14 84.7 61 70.5
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 5.1e-14 84.0 132 37.1
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 1.3e-12 79.3 94 53.2
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.3e-12 79.3 111 34.2
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.2e-12 76.6 50 80.0
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 6.5e-09 67.0 134 31.3
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 6.5e-09 67.0 134 31.3


User provided reference genes

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