Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 3.3e-89 332.4 276 100.0
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 7.2e-44 181.8 309 53.7
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 1.4e-31 141.0 107 68.2
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 3.1e-31 139.8 106 66.0
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 1.3e-29 134.4 107 63.6
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 9.4e-28 128.3 248 51.6
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 1.2e-27 127.9 106 62.3
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 2.1e-27 127.1 112 58.0
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 2.1e-27 127.1 101 62.4
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.0e-26 124.8 101 60.4
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.8e-26 124.0 101 60.4
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 1.8e-26 124.0 101 59.4
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 2.3e-26 123.6 101 61.4
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 3.9e-26 122.9 102 59.8
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 2.0e-25 120.6 135 54.1
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 4.4e-25 119.4 102 58.8
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 9.7e-25 118.2 101 57.4
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 3.7e-24 116.3 99 57.6
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 6.3e-24 115.5 100 56.0
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 1.1e-23 114.8 102 55.9
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 2.4e-23 113.6 110 55.5
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 5.3e-23 112.5 100 55.0
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 5.3e-23 112.5 103 55.3
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 9.1e-23 111.7 110 54.5
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.2e-22 111.3 100 54.0
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 2.6e-22 110.2 100 51.0
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 3.5e-22 109.8 103 54.4
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 5.9e-22 109.0 101 53.5
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 7.7e-22 108.6 100 56.0
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 1.7e-21 107.5 110 50.0
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 2.9e-21 106.7 100 53.0
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 3.8e-21 106.3 109 49.5
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 5.0e-21 105.9 108 50.0
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 6.5e-21 105.5 101 53.5
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 8.5e-21 105.1 100 55.0
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 1.1e-20 104.8 100 49.0
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.1e-20 104.8 108 47.2
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 1.9e-20 104.0 100 52.0
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 4.2e-20 102.8 100 51.0
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 7.2e-20 102.1 101 53.5
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 7.2e-20 102.1 101 52.5
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 7.2e-20 102.1 100 49.0
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 7.2e-20 102.1 107 48.6
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 9.4e-20 101.7 100 52.0
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 9.4e-20 101.7 108 47.2
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 9.4e-20 101.7 110 48.2
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.2e-19 101.3 108 47.2
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 1.2e-19 101.3 101 52.5
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 1.6e-19 100.9 100 54.0
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 1.6e-19 100.9 100 49.0
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 1.6e-19 100.9 100 49.0
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 1.6e-19 100.9 101 49.5
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 2.7e-19 100.1 101 48.5
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 3.6e-19 99.8 108 46.3
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 3.6e-19 99.8 108 46.3
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 8.0e-19 98.6 100 48.0
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 1.0e-18 98.2 95 49.5
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 1.0e-18 98.2 110 46.4
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 1.4e-18 97.8 105 43.8
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 1.4e-18 97.8 108 42.6
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.3e-18 97.1 109 49.5
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 3.0e-18 96.7 113 46.0
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 4.0e-18 96.3 101 47.5
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 4.0e-18 96.3 101 47.5
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 4.0e-18 96.3 111 47.7
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 4.0e-18 96.3 122 44.3
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 4.0e-18 96.3 100 46.0
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 6.7e-18 95.5 100 45.0
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 6.7e-18 95.5 101 47.5
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 8.8e-18 95.1 100 45.0
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.2e-17 94.7 108 44.4
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 1.2e-17 94.7 101 46.5
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 2.6e-17 93.6 101 46.5
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 3.3e-17 93.2 101 46.5
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 4.4e-17 92.8 110 44.5
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 5.7e-17 92.4 110 45.5
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 1.3e-16 91.3 101 46.5
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 1.7e-16 90.9 101 46.5
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 2.2e-16 90.5 101 45.5
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 2.8e-16 90.1 108 42.6
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 2.8e-16 90.1 108 39.8
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 3.7e-16 89.7 108 45.4
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 3.7e-16 89.7 119 42.9
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 8.3e-16 88.6 108 44.4
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 1.1e-15 88.2 102 44.1
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 2.4e-15 87.0 102 43.1
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 3.1e-15 86.7 107 41.1
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 5.3e-15 85.9 108 38.9
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 7.0e-15 85.5 113 44.2
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 1.6e-14 84.3 113 43.4
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 1.6e-14 84.3 113 43.4
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 2.0e-14 84.0 113 42.5
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 3.8e-13 79.7 89 41.6
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 8.5e-13 78.6 121 35.5
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.5e-12 77.8 109 41.3
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 6.1e-11 72.4 101 39.6
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 8.0e-11 72.0 84 47.6
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 1.8e-10 70.9 80 47.5
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 2.3e-10 70.5 91 41.8
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 3.0e-10 70.1 89 42.7
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 3.0e-10 70.1 83 45.8
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 5.2e-10 69.3 104 38.5
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 6.8e-10 68.9 83 48.2
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 6.8e-10 68.9 101 37.6
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 1.2e-09 68.2 117 37.6
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 1.2e-09 68.2 117 37.6
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 3.4e-09 66.6 80 43.8
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 3.7e-08 63.2 105 34.3
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 1.4e-07 61.2 105 38.1
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 1.8e-07 60.8 69 46.4
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.8e-07 60.8 103 30.1
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 7.0e-07 58.9 108 36.1
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 7.0e-07 58.9 108 36.1
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 2.7e-06 57.0 59 49.2
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 4.5e-06 56.2 107 35.5
Zm00001eb230930 Zea mays HOM05D002637 ORTHO05D009046 7.7e-06 55.5 99 36.4


User provided reference genes

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