Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 4.0e-82 308.1 165 100.0
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 6.6e-61 237.7 159 81.1
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 5.2e-50 201.4 165 69.7
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 4.4e-49 198.4 124 84.7
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 4.4e-49 198.4 141 77.3
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 6.4e-48 194.5 163 68.1
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.9e-47 193.0 139 74.1
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.1e-44 183.7 140 72.9
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.1e-44 183.7 140 72.9
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 6.2e-43 177.9 176 63.1
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 2.6e-41 172.6 159 62.3
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.3e-40 170.2 177 59.3
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 2.9e-40 169.1 124 71.0
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 7.8e-38 161.0 159 58.5
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.3e-37 160.2 163 57.7
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 2.3e-37 159.5 124 70.2
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 3.0e-37 159.1 126 67.5
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 5.1e-37 158.3 145 61.4
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 6.6e-37 157.9 122 68.0
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.1e-36 157.1 120 70.0
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.5e-36 156.8 146 60.3
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.9e-36 156.4 140 62.1
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 5.6e-36 154.8 143 65.0
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 7.3e-36 154.5 158 54.4
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.2e-35 153.7 147 61.2
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 2.1e-35 152.9 148 59.5
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 3.6e-35 152.1 164 56.7
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 1.8e-34 149.8 116 70.7
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 2.4e-34 149.4 146 59.6
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 4.0e-34 148.7 118 66.9
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 6.9e-34 147.9 132 62.1
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 2.6e-33 146.0 142 60.6
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 9.9e-33 144.1 144 61.1
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.7e-32 143.3 116 68.1
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 3.8e-32 142.1 117 63.2
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 8.4e-32 141.0 131 55.0
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 1.1e-31 140.6 116 66.4
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 2.4e-31 139.4 97 74.2
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 2.4e-31 139.4 97 74.2
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 5.4e-31 138.3 125 58.4
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 5.4e-31 138.3 125 58.4
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 5.4e-31 138.3 151 53.0
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 2.7e-30 136.0 121 61.2
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 4.6e-30 135.2 122 59.0
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 1.7e-29 133.3 117 62.4
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 1.7e-29 133.3 118 61.9
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.3e-29 132.9 155 52.3
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 6.6e-29 131.3 123 61.8
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 2.5e-28 129.4 68 94.1
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 5.6e-28 128.3 164 48.8
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 7.3e-28 127.9 155 49.7
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 2.8e-27 125.9 145 55.2
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 3.6e-27 125.6 168 51.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 3.6e-27 125.6 155 53.5
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 8.1e-27 124.4 129 55.8
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.1e-26 122.5 176 47.7
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 5.3e-26 121.7 123 57.7
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 2.0e-25 119.8 118 52.5
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 2.6e-25 119.4 147 46.9
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 4.5e-25 118.6 99 65.7
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 2.2e-24 116.3 133 52.6
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 8.4e-24 114.4 117 50.4
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.1e-23 114.0 126 54.8
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 3.2e-23 112.5 97 61.9
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 3.2e-23 112.5 164 47.0
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 5.4e-23 111.7 99 62.6
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 7.1e-23 111.3 99 59.6
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.2e-22 110.5 121 47.9
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.2e-22 110.5 96 61.5
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 6.0e-22 108.2 116 47.4
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 2.3e-21 106.3 126 47.6
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.1e-20 104.0 68 76.5
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 2.1e-19 99.8 95 60.0
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 3.6e-19 99.0 76 67.1
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 6.2e-19 98.2 95 55.8
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 6.9e-18 94.7 80 58.8
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 2.2e-16 89.7 99 46.5
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 8.7e-13 77.8 67 68.7
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 5.6e-12 75.1 46 80.4
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 9.6e-12 74.3 53 69.8
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 9.6e-12 74.3 53 71.7
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 3.7e-11 72.4 115 36.5
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 4.8e-11 72.0 53 69.8
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 4.8e-11 72.0 85 50.6
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 6.2e-11 71.6 72 59.7
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 1.4e-10 70.5 63 65.1
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 4.0e-10 68.9 53 64.2
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 5.3e-10 68.6 115 33.0
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 3.4e-09 65.9 98 45.9
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 1.3e-08 63.9 65 52.3
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 6.5e-08 61.6 52 67.3
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.1e-07 60.8 113 38.9
QL02p047905 Quercus lobata HOM05D007678 ORTHO05D009658 3.5e-06 55.8 55 50.9


User provided reference genes

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