Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G036701 Phaseolus vulgaris HOM05D004994 ORTHO05D013005 1.0e-75 286.6 138 100.0
Phvul.008G036800 Phaseolus vulgaris HOM05D004994 ORTHO05D006359 5.7e-26 121.3 61 100.0
Glyma.09G237300 Glycine max HOM05D004994 ORTHO05D006359 7.8e-23 110.9 61 90.2
VMungo1383G3357 Vigna mungo HOM05D004994 ORTHO05D006359 1.3e-22 110.2 61 90.2
Glyma.18G260200 Glycine max HOM05D004994 ORTHO05D006359 8.6e-22 107.5 85 69.4
arahy.Tifrunner.gnm1.ann1.87XTYU Arachis hypogaea HOM05D004994 ORTHO05D006359 4.3e-21 105.1 84 65.5
Psat3g197680 Pisum sativum HOM05D004994 ORTHO05D013005 1.6e-20 103.2 61 82.0
Medtr7g010920 Medicago truncatula HOM05D004994 ORTHO05D006359 2.8e-20 102.4 62 80.6
TPR.G33585 Trifolium pratense HOM05D004994 ORTHO05D006359 8.0e-20 100.9 62 77.4
Lj1g0010103 Lotus japonicus HOM05D004994 ORTHO05D006359 4.0e-19 98.6 62 82.3
Ca_02909_v3 Cicer arietinum L. HOM05D004994 ORTHO05D006359 3.7e-17 92.0 63 76.2
Duzib264G0898 Durio zibethinus HOM05D004994 ORTHO05D006359 3.9e-14 82.0 98 43.9
arahy.Tifrunner.gnm1.ann1.AM65QQ Arachis hypogaea HOM05D021356 ORTHO05D013005 7.3e-13 77.8 96 45.8
Dinv33769 Davidia involucrata HOM05D004994 ORTHO05D006359 7.3e-13 77.8 56 73.2
arahy.Tifrunner.gnm1.ann1.C2TUDX Arachis hypogaea HOM05D021356 ORTHO05D013005 9.5e-13 77.4 98 44.9
Dinv11519 Davidia involucrata HOM05D004994 ORTHO05D006359 1.6e-12 76.6 56 71.4
arahy.Tifrunner.gnm1.ann1.77EU82 Arachis hypogaea HOM05D000106 ORTHO05D013005 4.7e-12 75.1 50 72.0
Duzib187G1623 Durio zibethinus HOM05D004994 ORTHO05D006359 6.2e-12 74.7 54 61.1
Duzib147G1333 Durio zibethinus HOM05D004994 ORTHO05D006359 8.1e-12 74.3 57 61.4
CiPaw.03G025700 Carya illinoinensis HOM05D004994 ORTHO05D006359 1.8e-11 73.2 58 62.1
arahy.Tifrunner.gnm1.ann1.42G4ZR Arachis hypogaea HOM05D021356 ORTHO05D013005 2.3e-11 72.8 96 44.8
COL.COLO4_08441 Corchorus olitorius HOM05D004994 ORTHO05D006359 3.1e-11 72.4 57 61.4
Gohir.A11G069700 Gossypium hirsutum HOM05D004994 ORTHO05D006359 3.1e-11 72.4 57 56.1
Lalb_Chr04g0258601 Lupinus albus HOM05D004994 ORTHO05D006359 3.1e-11 72.4 57 63.2
QL02p082399 Quercus lobata HOM05D004994 ORTHO05D006359 4.0e-11 72.0 58 60.3
Cfa007567 Carpinus fangiana HOM05D004994 ORTHO05D006359 5.2e-11 71.6 58 65.5
vmacro18188 Vaccinium macrocarpon HOM05D004994 ORTHO05D006359 5.2e-11 71.6 60 63.3
Gorai.007G079100 Gossypium raimondii HOM05D004994 ORTHO05D006359 1.2e-10 70.5 56 57.1
Actinidia38767 Actinidia chinensis HOM05D004994 ORTHO05D006359 1.5e-10 70.1 56 64.3
arahy.Tifrunner.gnm1.ann1.82NU7A Arachis hypogaea HOM05D021356 ORTHO05D013005 2.0e-10 69.7 44 72.7
Cpa.g.sc1691.1 Carica papaya HOM05D004994 ORTHO05D006359 2.0e-10 69.7 60 55.0
GSVIVG01011430001 Vitis vinifera HOM05D004994 ORTHO05D006359 2.0e-10 69.7 55 63.6
CiPaw.04G016600 Carya illinoinensis HOM05D004994 ORTHO05D006359 3.4e-10 68.9 59 55.9
TWI60G0928 Tripterygium wilfordii HOM05D004994 ORTHO05D006359 4.4e-10 68.6 99 40.4
Gorai.012G053600 Gossypium raimondii HOM05D004994 ORTHO05D006359 5.8e-10 68.2 55 54.5
Sc10g0003560 Simmondsia chinensis HOM05D004994 ORTHO05D006359 1.7e-09 66.6 57 52.6
arahy.Tifrunner.gnm1.ann1.JM3FNX Arachis hypogaea HOM05D021356 ORTHO05D013005 2.9e-09 65.9 41 73.2
MD09G1052100 Malus domestica HOM05D004994 ORTHO05D006359 2.9e-09 65.9 56 58.9
CSS0023109 Camellia sinensis var. sinensis HOM05D004994 ORTHO05D006359 4.9e-09 65.1 59 59.3
CSS0046814 Camellia sinensis var. sinensis HOM05D004994 ORTHO05D006359 4.9e-09 65.1 59 59.3
Eucgr.J01350 Eucalyptus grandis HOM05D004994 ORTHO05D006359 1.1e-08 63.9 83 47.0
TAR629G2463 Trochodendron aralioides HOM05D004994 ORTHO05D006359 1.1e-08 63.9 61 54.1
Lj1g0002056 Lotus japonicus HOM05D004994 ORTHO05D006359 1.9e-08 63.2 69 50.7
Lsat_1_v5_gn_3_100161 Lactuca sativa HOM05D004994 ORTHO05D006359 2.4e-08 62.8 56 58.9
TAR374G0051 Trochodendron aralioides HOM05D004994 ORTHO05D006359 2.4e-08 62.8 55 54.5
arahy.Tifrunner.gnm1.ann1.MRU9CS Arachis hypogaea HOM05D021356 ORTHO05D013005 4.1e-08 62.0 42 66.7
Ciclev10012215m.g Citrus clementina HOM05D004994 ORTHO05D006359 7.1e-08 61.2 53 56.6
Actinidia17553 Actinidia chinensis HOM05D004994 ORTHO05D006359 9.2e-08 60.8 58 56.9
Hma1.2p1_0409F.1_g146890 Hydrangea macrophylla HOM05D004994 ORTHO05D006359 1.2e-07 60.5 53 56.6
CANSAT64G0414 Cannabis sativa HOM05D004994 ORTHO05D006359 1.6e-07 60.1 51 56.9
Atru.chr8.179 Acer truncatum HOM05D004994 ORTHO05D006359 2.1e-07 59.7 61 49.2
Hund13212 Selenicereus undatus HOM05D004994 ORTHO05D006359 6.0e-07 58.2 57 47.4
THA.LOC104805471 Tarenaya hassleriana HOM05D004994 ORTHO05D006359 1.3e-06 57.0 55 47.3
HanXRQChr13g0399841 Helianthus annuus HOM05D004994 ORTHO05D006359 3.0e-06 55.8 65 50.8
Manes.02G047000 Manihot esculenta HOM05D004994 ORTHO05D006359 3.0e-06 55.8 61 54.1


User provided reference genes

Program Settings