Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.2e-146 523.1 252 100.0
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 8.3e-140 500.4 252 94.8
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 5.2e-134 481.1 252 90.9
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 2.2e-132 475.7 252 89.3
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 2.3e-129 465.7 252 87.7
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 1.2e-127 459.9 252 86.5
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 2.6e-125 452.2 252 85.3
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 7.5e-125 450.7 252 83.7
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 9.9e-125 450.3 262 83.2
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 1.1e-123 446.8 252 83.3
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 1.9e-123 446.0 252 82.9
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 7.8e-122 440.7 252 83.7
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 4.6e-114 414.8 252 75.4
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.7e-113 412.9 252 73.0
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 3.9e-113 411.8 252 75.4
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 8.7e-113 410.6 251 75.7
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 3.3e-112 408.7 252 73.4
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.8e-111 405.6 252 74.2
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.7e-111 404.8 252 74.2
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 4.7e-111 404.8 252 74.2
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 6.2e-111 404.4 252 73.4
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 1.2e-109 400.2 252 73.8
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 1.5e-109 399.8 250 73.6
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 2.2e-108 396.0 252 71.8
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.2e-108 396.0 252 71.8
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 2.2e-108 396.0 252 71.8
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 4.9e-108 394.8 252 73.4
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 6.4e-108 394.4 252 72.6
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 8.4e-108 394.0 252 71.8
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.1e-107 393.7 252 71.4
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 2.1e-106 389.4 252 73.0
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 2.1e-106 389.4 252 72.6
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 2.7e-106 389.0 252 72.6
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 6.0e-106 387.9 252 69.0
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 7.8e-106 387.5 252 69.8
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.0e-105 387.1 252 71.0
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 3.3e-104 382.1 252 71.0
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 7.3e-104 380.9 252 70.2
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 2.1e-103 379.4 256 71.1
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 2.1e-103 379.4 253 69.6
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.8e-103 379.0 253 70.0
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 2.8e-103 379.0 252 68.3
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 4.8e-103 378.3 253 69.6
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 6.2e-103 377.9 252 68.7
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 3.1e-102 375.6 253 70.8
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 5.3e-102 374.8 253 68.8
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 5.3e-102 374.8 252 70.2
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 1.5e-101 373.2 252 69.0
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 2.0e-101 372.9 253 68.0
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 5.8e-101 371.3 253 68.0
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 7.6e-101 370.9 252 68.7
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 9.9e-101 370.5 252 68.7
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 9.9e-101 370.5 253 67.6
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.7e-100 369.8 252 68.7
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.7e-100 369.8 252 66.7
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 2.2e-100 369.4 253 68.4
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 2.2e-100 369.4 251 66.9
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 2.9e-100 369.0 252 67.9
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.8e-100 368.6 252 68.7
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 8.4e-100 367.5 252 69.0
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 1.4e-99 366.7 252 66.3
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 2.4e-99 365.9 252 66.7
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 9.3e-99 364.0 252 67.1
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 9.3e-99 364.0 252 67.1
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 1.2e-98 363.6 252 67.5
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.6e-98 363.2 252 66.7
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 1.3e-97 360.1 252 65.5
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 3.9e-97 358.6 253 67.2
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 8.7e-97 357.5 252 65.9
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 1.5e-96 356.7 252 69.8
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 4.3e-96 355.1 252 67.9
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 4.8e-95 351.7 255 66.7
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 1.1e-94 350.5 254 65.4
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 2.4e-94 349.4 254 65.0
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 3.1e-94 349.0 253 64.0
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.0e-93 346.3 247 64.0
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 3.4e-93 345.5 252 64.3
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 4.5e-93 345.1 250 64.0
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.3e-92 343.6 254 62.6
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 4.9e-92 341.7 247 64.0
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 6.4e-92 341.3 254 63.8
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 8.4e-92 340.9 254 61.8
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 8.4e-92 340.9 254 61.8
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 8.4e-92 340.9 254 61.8
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 8.4e-92 340.9 254 61.8
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 1.4e-91 340.1 254 61.8
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 3.2e-91 339.0 252 62.7
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 4.2e-91 338.6 254 63.4
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 1.2e-90 337.0 253 62.8
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 4.6e-90 335.1 254 61.0
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 4.6e-90 335.1 254 61.8
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 6.0e-90 334.7 254 61.8
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 4.3e-88 328.6 252 59.9
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 4.3e-88 328.6 230 67.4
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 1.9e-83 313.2 252 57.5
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 2.7e-82 309.3 205 68.8
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 3.0e-81 305.8 248 56.0
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 3.0e-81 305.8 241 59.3
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 6.9e-78 294.7 239 54.8
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 1.5e-72 276.9 251 53.0
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 8.2e-71 271.2 250 51.6
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 2.4e-70 269.6 249 52.6
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 6.9e-70 268.1 249 52.2
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 6.9e-70 268.1 250 52.0
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 6.3e-63 245.0 252 46.4
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 5.3e-62 241.9 154 67.5
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 6.5e-60 235.0 267 43.8
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 6.7e-57 224.9 251 42.2
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 5.9e-53 211.8 141 72.3
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 2.3e-49 199.9 287 42.2
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 6.3e-47 191.8 261 44.8
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 2.4e-46 189.9 111 73.9
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 2.0e-40 170.2 100 80.0
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 3.5e-37 159.5 95 80.0
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 1.8e-25 120.6 68 70.6
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 8.3e-23 111.7 55 85.5
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 2.8e-18 96.7 52 73.1
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 8.0e-18 95.1 93 54.8
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 1.2e-16 91.3 154 41.6
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 7.1e-14 82.0 45 80.0
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 4.7e-10 69.3 117 29.1
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 9.2e-06 55.1 106 33.0


User provided reference genes

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