Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G031740 Phaseolus vulgaris HOM05D000345 ORTHO05D000215 1.4e-81 306.2 149 100.0
VMungo1383G3684 Vigna mungo HOM05D000345 ORTHO05D000215 6.8e-73 277.3 150 92.0
Glyma.18G268700 Glycine max HOM05D000345 ORTHO05D000215 9.5e-67 256.9 152 85.5
Glyma.08G247300 Glycine max HOM05D000345 ORTHO05D000215 2.9e-60 235.3 150 80.0
VMungo0464G0196 Vigna mungo HOM05D000345 ORTHO05D000215 8.9e-41 170.6 156 61.5
Phvul.004G037700 Phaseolus vulgaris HOM05D000345 ORTHO05D000215 3.7e-39 165.2 158 58.2
Glyma.19G030900 Glycine max HOM05D000345 ORTHO05D000215 3.3e-35 152.1 177 56.5
Lj1g0010350 Lotus japonicus HOM05D000345 ORTHO05D000215 1.6e-34 149.8 155 61.3
Glyma.13G056000 Glycine max HOM05D000345 ORTHO05D000215 2.4e-33 146.0 175 57.7
Lalb_Chr02g0158891 Lupinus albus HOM05D000345 ORTHO05D000215 9.2e-30 134.0 160 58.1
Lalb_Chr21g0318371 Lupinus albus HOM05D000345 ORTHO05D000215 7.8e-29 131.0 155 56.8
QL02p067433 Quercus lobata HOM05D000345 ORTHO05D000215 1.4e-25 120.2 160 47.5
Duzib264G0963 Durio zibethinus HOM05D000345 ORTHO05D000215 9.9e-24 114.0 163 49.7
Thecc.04G097200 Theobroma cacao HOM05D000345 ORTHO05D000215 1.1e-22 110.5 163 50.3
Potri.017G094800 Populus trichocarpa HOM05D000345 ORTHO05D000215 8.7e-20 100.9 162 45.7
CSS0017069 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 9.6e-19 97.4 159 43.4
Duzib187G1165 Durio zibethinus HOM05D000345 ORTHO05D000215 9.6e-19 97.4 165 46.1
GSVIVG01032911001 Vitis vinifera HOM05D000345 ORTHO05D000215 9.6e-19 97.4 151 46.4
TPR.G33442 Trifolium pratense HOM05D000345 ORTHO05D000215 1.3e-18 97.1 164 48.8
Lj2g0016573 Lotus japonicus HOM05D000345 ORTHO05D000215 2.8e-18 95.9 133 54.9
Duzib147G0310 Durio zibethinus HOM05D000345 ORTHO05D000215 4.8e-18 95.1 162 45.7
Medtr6g015350 Medicago truncatula HOM05D000345 ORTHO05D000215 1.1e-17 94.0 147 51.7
CiPaw.04G054700 Carya illinoinensis HOM05D000345 ORTHO05D000215 3.1e-17 92.4 164 42.7
CSS0034115 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 4.0e-17 92.0 153 43.8
Sabra04G0069800 Salix brachista HOM05D000345 ORTHO05D000215 5.3e-17 91.7 165 44.8
Manes.02G055900 Manihot esculenta HOM05D000345 ORTHO05D000215 2.0e-16 89.7 136 44.9
TAR371G0572 Trochodendron aralioides HOM05D000345 ORTHO05D000215 2.0e-16 89.7 151 47.7
Psat1g067000 Pisum sativum HOM05D000345 ORTHO05D000215 3.4e-16 89.0 111 51.4
TPR.G4314 Trifolium pratense HOM05D000345 ORTHO05D000215 4.5e-16 88.6 166 43.4
Cpa.g.sc14.188 Carica papaya HOM05D000345 ORTHO05D000215 2.9e-15 85.9 171 41.5
Atru.chr8.475 Acer truncatum HOM05D000345 ORTHO05D000215 4.9e-15 85.1 163 41.7
vmacro05641 Vaccinium macrocarpon HOM05D000345 ORTHO05D000215 6.4e-15 84.7 149 42.3
Potri.004G116100 Populus trichocarpa HOM05D000345 ORTHO05D000215 1.1e-14 84.0 113 52.2
Nn3g17467 Nelumbo nucifera HOM05D000345 ORTHO05D000215 1.9e-14 83.2 160 39.4
Manes.01G094200 Manihot esculenta HOM05D000345 ORTHO05D000215 2.4e-14 82.8 155 44.5
Ca_13740_v3 Cicer arietinum L. HOM05D000345 ORTHO05D000215 5.4e-14 81.6 158 44.9
Sabra17G0084000 Salix brachista HOM05D000345 ORTHO05D000215 1.6e-13 80.1 143 42.7
Medtr7g015010 Medicago truncatula HOM05D000345 ORTHO05D000215 2.7e-13 79.3 160 40.6
Rhsim10G0051100 Rhododendron simsii HOM05D000345 ORTHO05D000215 3.5e-13 79.0 148 40.5
Haze_14421 Corylus avellana HOM05D000345 ORTHO05D000215 4.6e-13 78.6 163 41.1
Psat3g202920 Pisum sativum HOM05D000345 ORTHO05D000215 1.8e-12 76.6 165 38.8
Thecc.03G103800 Theobroma cacao HOM05D000345 ORTHO05D000215 5.1e-12 75.1 154 38.3
COL.COLO4_37964 Corchorus olitorius HOM05D000345 ORTHO05D000215 1.5e-11 73.6 154 39.6
CANSAT64G1907 Cannabis sativa HOM05D000345 ORTHO05D000215 3.7e-10 68.9 163 35.0
Dinv34935 Davidia involucrata HOM05D001834 ORTHO05D001762 6.2e-10 68.2 86 50.0
Rhsim08G0075300 Rhododendron simsii HOM05D000345 ORTHO05D000215 2.4e-09 66.2 137 40.9
Oeu025534.1 Olea europaea HOM05D000345 ORTHO05D000215 4.0e-09 65.5 144 34.7
TAR629G1889 Trochodendron aralioides HOM05D000345 ORTHO05D000215 5.3e-09 65.1 164 39.0
Manes.14G086500 Manihot esculenta HOM05D000345 ORTHO05D000215 1.2e-08 63.9 148 34.5
Prupe.3G252600 Prunus persica HOM05D000345 ORTHO05D000215 2.0e-08 63.2 173 39.9
Peaxi162Scf00166g00045 Petunia axillaris HOM05D000345 ORTHO05D000215 7.6e-08 61.2 117 33.3
MBI19_g25292_MAGBIO Magnolia biondii HOM05D000345 ORTHO05D000215 4.9e-07 58.5 150 36.0
arahy.Tifrunner.gnm1.ann1.N9U68C Arachis hypogaea HOM05D000345 ORTHO05D000215 4.2e-06 55.5 100 44.0
Actinidia35041 Actinidia chinensis HOM05D000345 ORTHO05D000215 7.1e-06 54.7 157 35.7
Duzib205G0744 Durio zibethinus HOM05D000345 ORTHO05D000215 7.1e-06 54.7 162 34.6


User provided reference genes

Program Settings