Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G024300 Phaseolus vulgaris HOM05D007093 ORTHO05D008910 9.0e-287 989.9 653 100.0
VMungo1383G0771 Vigna mungo HOM05D007093 ORTHO05D008910 9.7e-233 810.4 608 88.8
Glyma.08G254100 Glycine max HOM05D007093 ORTHO05D008910 4.3e-180 635.6 470 83.2
Glyma.18G276600 Glycine max HOM05D007093 ORTHO05D008910 1.0e-173 614.4 600 70.0
Lj1g0021235 Lotus japonicus HOM05D007093 ORTHO05D008910 6.4e-160 568.5 466 76.2
Medtr7g017610 Medicago truncatula HOM05D007093 ORTHO05D008910 2.7e-158 563.1 449 77.5
Ca_06961_v3 Cicer arietinum L. HOM05D007093 ORTHO05D008910 2.3e-157 560.1 441 77.3
TPR.G3254 Trifolium pratense HOM05D007093 ORTHO05D008910 1.4e-154 550.8 445 76.9
Psat3g194440 Pisum sativum HOM05D007093 ORTHO05D008910 1.2e-153 547.7 447 74.5
Lalb_Chr10g0092581 Lupinus albus HOM05D007093 ORTHO05D008910 5.3e-146 522.3 466 72.5
arahy.Tifrunner.gnm1.ann1.H8YVTX Arachis hypogaea HOM05D007093 ORTHO05D008910 1.8e-138 497.3 475 69.7
arahy.Tifrunner.gnm1.ann1.T191C4 Arachis hypogaea HOM05D007093 ORTHO05D008910 9.0e-138 495.0 475 69.7
Cfa007712 Carpinus fangiana HOM05D007093 ORTHO05D008910 1.5e-121 441.0 456 62.9
Haze_14367 Corylus avellana HOM05D007093 ORTHO05D008910 2.0e-121 440.7 466 61.4
QL09p029458 Quercus lobata HOM05D007093 ORTHO05D008910 1.9e-119 434.1 437 63.8
Dinv11483 Davidia involucrata HOM05D007093 ORTHO05D008910 3.9e-117 426.4 452 61.1
FAN09G1105 Fragaria x ananassa HOM05D007093 ORTHO05D008910 3.7e-115 419.9 437 63.2
QL09p029436 Quercus lobata HOM05D007093 ORTHO05D008910 1.4e-114 417.9 437 57.7
FAN05G3563 Fragaria x ananassa HOM05D007093 ORTHO05D008910 3.1e-114 416.8 437 63.8
FvH4_6g46090 Fragaria vesca HOM05D007093 ORTHO05D008910 4.1e-114 416.4 437 63.2
MD09G1077000 Malus domestica HOM05D007093 ORTHO05D008910 2.0e-113 414.1 439 64.7
FAN02G0988 Fragaria x ananassa HOM05D007093 ORTHO05D008910 2.6e-113 413.7 437 62.5
CiPaw.04G051100 Carya illinoinensis HOM05D007093 ORTHO05D008910 3.5e-113 413.3 461 59.0
RcHm_v2.0_Chr2g0164431 Rosa chinensis HOM05D007093 ORTHO05D008910 7.7e-113 412.1 437 61.8
TAR622G0743 Trochodendron aralioides HOM05D007093 ORTHO05D008910 7.7e-113 412.1 434 62.7
Atru.chr6.1376 Acer truncatum HOM05D007093 ORTHO05D008910 1.2e-110 404.8 446 61.7
MELO3C022059.2 Cucumis melo HOM05D007093 ORTHO05D008910 5.2e-109 399.4 449 59.9
Ciclev10011344m.g Citrus clementina HOM05D007093 ORTHO05D008910 6.8e-109 399.1 438 60.3
CANSAT64G0836 Cannabis sativa HOM05D007093 ORTHO05D008910 1.2e-108 398.3 453 60.0
CSS0026118 Camellia sinensis var. sinensis HOM05D007093 ORTHO05D008910 1.5e-108 397.9 449 59.0
vmacro19123 Vaccinium macrocarpon HOM05D007093 ORTHO05D008910 9.1e-106 388.7 435 59.8
TWI60G1187 Tripterygium wilfordii HOM05D007093 ORTHO05D008910 4.5e-105 386.3 437 57.4
Rhsim10G0045200 Rhododendron simsii HOM05D007093 ORTHO05D008910 2.5e-103 380.6 468 56.2
PGR042G3371 Punica granatum HOM05D007093 ORTHO05D008910 4.2e-103 379.8 444 61.5
SalBow1G5933 Salvia bowleyana HOM05D007093 ORTHO05D008910 1.8e-101 374.4 437 58.8
Cpa.g.sc14.149 Carica papaya HOM05D007093 ORTHO05D008910 5.2e-101 372.9 437 60.0
PSO017G2846 Papaver somniferum HOM05D007093 ORTHO05D008910 2.0e-100 370.9 467 56.7
Gorai.006G011900 Gossypium raimondii HOM05D007093 ORTHO05D008910 2.8e-99 367.1 460 58.7
Peaxi162Scf00166g00640 Petunia axillaris HOM05D007093 ORTHO05D008910 1.1e-98 365.2 438 60.7
Gohir.D09G010300 Gossypium hirsutum HOM05D007093 ORTHO05D008910 1.4e-98 364.8 460 57.4
Potri.017G090500 Populus trichocarpa HOM05D007093 ORTHO05D008910 3.1e-98 363.6 437 59.3
PSO478G5205 Papaver somniferum HOM05D007093 ORTHO05D008910 1.6e-97 361.3 437 58.8
Gohir.A09G011300 Gossypium hirsutum HOM05D007093 ORTHO05D008910 2.7e-97 360.5 452 56.6
Manes.02G051500 Manihot esculenta HOM05D007093 ORTHO05D008910 1.3e-96 358.2 436 59.4
CAN.G206.202 Capsicum annuum HOM05D007093 ORTHO05D008910 1.7e-96 357.8 447 58.6
Thhalv10003982m.g Eutrema salsugineum HOM05D007093 ORTHO05D008910 1.1e-95 355.1 437 57.9
Cc07_g04020 Coffea canephora HOM05D007093 ORTHO05D008910 1.5e-95 354.8 438 57.1
CARHR153970 Cardamine hirsuta HOM05D007093 ORTHO05D008910 5.5e-95 352.8 439 56.7
MSTRG.3018 Avicennia marina HOM05D007093 ORTHO05D008910 9.5e-95 352.1 442 57.5
Nn4g23352 Nelumbo nucifera HOM05D007093 ORTHO05D008910 2.1e-94 350.9 386 63.5
Sp2g17890 Schrenkiella parvula HOM05D007093 ORTHO05D008910 4.7e-94 349.7 437 56.8
AUR62042568 Chenopodium quinoa HOM05D007093 ORTHO05D008910 4.0e-93 346.7 437 54.2
Carub.0005s0800 Capsella rubella HOM05D007093 ORTHO05D008910 6.8e-93 345.9 437 56.3
Sabra17G0079700 Salix brachista HOM05D007093 ORTHO05D008910 6.8e-93 345.9 390 62.1
Nitab4.5_0000565g0100 Nicotiana tabacum HOM05D007093 ORTHO05D008910 1.2e-92 345.1 465 55.7
AL5G19290 Arabidopsis lyrata HOM05D007093 ORTHO05D008910 1.5e-92 344.7 439 56.5
Prupe.3G247100 Prunus persica HOM05D007093 ORTHO05D008910 4.4e-92 343.2 439 58.3
BcaB07g30086 Brassica carinata HOM05D007093 ORTHO05D008910 5.7e-92 342.8 437 56.3
ClCG11G005040 Citrullus lanatus HOM05D007093 ORTHO05D008910 9.8e-92 342.0 437 56.3
Sed0021178 Sechium edule HOM05D007093 ORTHO05D008910 9.8e-92 342.0 449 55.5
AUR62018158 Chenopodium quinoa HOM05D007093 ORTHO05D008910 1.3e-91 341.7 437 53.8
Lj4A116G82 Lonicera japonica HOM05D007093 ORTHO05D008910 1.3e-91 341.7 379 63.6
AT3G29290 Arabidopsis thaliana HOM05D007093 ORTHO05D008910 8.3e-91 339.0 439 57.2
Sopen02g033330 Solanum pennellii HOM05D007093 ORTHO05D008910 1.4e-90 338.2 442 58.8
Zm00001eb008430 Zea mays HOM05D007093 ORTHO05D008910 4.1e-90 336.7 443 54.6
DCAR_005548 Daucus carota HOM05D007093 ORTHO05D008910 2.0e-89 334.3 399 57.4
Eucgr.J01427 Eucalyptus grandis HOM05D007093 ORTHO05D008910 2.9e-88 330.5 405 59.8
SGA_v2.0_scaffold52G19185 Striga asiatica HOM05D007093 ORTHO05D008910 4.3e-87 326.6 437 56.5
Actinidia07826 Actinidia chinensis HOM05D007093 ORTHO05D008910 8.0e-86 322.4 432 55.3
Sc10g0003260 Simmondsia chinensis HOM05D007093 ORTHO05D008910 8.9e-85 318.9 437 52.2
Oeu000638.1 Olea europaea HOM05D007093 ORTHO05D008910 2.9e-83 313.9 392 59.4
Migut.H00649 Erythranthe guttata HOM05D007093 ORTHO05D008910 1.4e-82 311.6 468 51.5
PGSC0003DMG400001354 Solanum tuberosum HOM05D007093 ORTHO05D008910 1.7e-80 304.7 442 55.9
Ah.10g031960 Amaranthus hybridus HOM05D007093 ORTHO05D008910 3.9e-80 303.5 437 51.5
Nitab4.5_0008213g0020 Nicotiana tabacum HOM05D007093 ORTHO05D008910 2.8e-78 297.4 442 54.3
Solyc02g088600.4 Solanum lycopersicum HOM05D007093 ORTHO05D008910 1.4e-77 295.0 442 54.5
unitig_899.g15158 Utricularia gibba HOM05D007093 ORTHO05D008910 4.4e-76 290.0 436 37.8
Lsat_1_v5_gn_2_87781 Lactuca sativa HOM05D007093 ORTHO05D008910 2.2e-75 287.7 447 49.4
Aa31LG10G7310 Aethionema arabicum HOM05D007093 ORTHO05D006741 3.2e-74 283.9 411 55.7
Duzib147G1133 Durio zibethinus HOM05D007093 ORTHO05D008910 2.1e-73 281.2 459 51.4
ECA238G1523 Erigeron canadensis HOM05D007093 ORTHO05D008910 2.3e-72 277.7 435 49.0
C02p55490 Brassica napus HOM05D007093 ORTHO05D008910 2.5e-71 274.2 378 41.5
BolC2t11605H Brassica oleracea HOM05D007093 ORTHO05D008910 2.5e-71 274.2 378 41.5
BcaC06g33684 Brassica carinata HOM05D007093 ORTHO05D008910 4.3e-71 273.5 438 49.8
GSVIVG01011494001 Vitis vinifera HOM05D007093 ORTHO05D008910 4.3e-71 273.5 437 52.4
C07p38180 Brassica napus HOM05D007093 ORTHO05D008910 4.7e-70 270.0 438 49.5
EL10Ac2g03091 Beta vulgaris HOM05D007093 ORTHO05D008910 1.1e-69 268.9 438 49.3
COL.COLO4_21381 Corchorus olitorius HOM05D007093 ORTHO05D008910 5.2e-69 266.5 411 53.8
SEGI_28807 Sequoiadendron giganteum HOM05D007093 ORTHO05D008910 2.9e-67 260.8 391 52.9
BolC7t44340H Brassica oleracea HOM05D007093 ORTHO05D008910 4.1e-66 256.9 438 46.1
Thecc.04G091300 Theobroma cacao HOM05D007093 ORTHO05D008910 4.1e-66 256.9 437 51.0
ATR0064G018 Amborella trichopoda HOM05D007093 ORTHO05D008910 9.2e-66 255.8 433 50.6
HanXRQChr07g0199471 Helianthus annuus HOM05D007093 ORTHO05D008910 9.6e-63 245.7 387 50.1
CsaV3_5G038790 Cucumis sativus L. HOM05D007093 ORTHO05D008910 2.2e-59 234.6 396 52.8
Zm00001eb408510 Zea mays HOM05D007093 ORTHO05D008910 6.9e-53 213.0 224 47.8
Os03g0211600 Oryza sativa ssp. japonica HOM05D007093 ORTHO05D008910 6.4e-51 206.5 197 51.3
CDE10G0932 Ceratophyllum demersum HOM05D007093 ORTHO05D008910 1.1e-50 205.7 189 52.9
THA.LOC104805501 Tarenaya hassleriana HOM05D007093 ORTHO05D008910 1.4e-50 205.3 438 45.7
A06p39990 Brassica napus HOM05D007093 ORTHO05D008910 4.2e-50 203.8 438 43.2
BraA06t26914Z Brassica rapa HOM05D007093 ORTHO05D008910 4.2e-50 203.8 438 43.2
C02p55430 Brassica napus HOM05D007093 ORTHO05D008910 4.5e-44 183.7 357 33.6
BolC2t11599H Brassica oleracea HOM05D007093 ORTHO05D008910 4.5e-44 183.7 357 33.6
RcHm_v2.0_Chr2g0164471 Rosa chinensis HOM05D007093 ORTHO05D008910 3.7e-30 137.5 105 63.8
BcaC03g17570 Brassica carinata HOM05D007093 ORTHO05D008910 2.4e-29 134.8 313 29.4
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 6.1e-09 67.0 162 24.7
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 6.1e-09 67.0 162 24.7
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 6.1e-09 67.0 168 26.2
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 7.9e-09 66.6 168 26.2
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 1.8e-08 65.5 168 25.6
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 1.8e-08 65.5 159 22.6
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 1.8e-08 65.5 168 26.8
ECA234G0114 Erigeron canadensis HOM05D000001 ORTHO05D000003 2.3e-08 65.1 235 24.3
Sc25g0004880 Simmondsia chinensis HOM05D006156 ORTHO05D007699 2.3e-08 65.1 169 28.4
SMO361G0319 Selaginella moellendorffii HOM05D005362 ORTHO05D010796 5.1e-08 63.9 188 23.9
QL09p009182 Quercus lobata HOM05D006156 ORTHO05D007699 1.1e-07 62.8 185 25.9
AUR62025156 Chenopodium quinoa HOM05D006156 ORTHO05D007699 2.0e-07 62.0 167 25.1
Nn8g40977 Nelumbo nucifera HOM05D000001 ORTHO05D000003 2.0e-07 62.0 213 22.5
AUR62033717 Chenopodium quinoa HOM05D006156 ORTHO05D007699 2.6e-07 61.6 167 25.1
MBI16_g27079_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000648 3.3e-07 61.2 191 27.2
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 3.3e-07 61.2 141 25.5
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 4.4e-07 60.8 129 28.7
Atru.chr3.1624 Acer truncatum HOM05D007128 ORTHO05D009059 5.7e-07 60.5 110 32.7
PGSC0003DMG400021371 Solanum tuberosum HOM05D006596 ORTHO05D008497 5.7e-07 60.5 114 28.9
CiPaw.05G196700 Carya illinoinensis HOM05D006156 ORTHO05D007699 7.4e-07 60.1 167 26.3
Potri.017G126600 Populus trichocarpa HOM05D002007 ORTHO05D000355 7.4e-07 60.1 198 22.7
Ah.06g188680 Amaranthus hybridus HOM05D002479 ORTHO05D002675 9.7e-07 59.7 93 33.3
Ah.06g188690 Amaranthus hybridus HOM05D002479 ORTHO05D002675 9.7e-07 59.7 93 33.3
Peaxi162Scf00103g00021 Petunia axillaris HOM05D002453 ORTHO05D002107 9.7e-07 59.7 200 21.5
Aqoxy5G04292 Aquilegia oxysepala HOM05D006156 ORTHO05D007699 1.3e-06 59.3 222 23.0
CAN.G481.4 Capsicum annuum HOM05D006156 ORTHO05D007699 1.3e-06 59.3 235 23.8
QL11p032336 Quercus lobata HOM05D003056 ORTHO05D003422 1.3e-06 59.3 166 22.9
MSTRG.23026 Avicennia marina HOM05D002453 ORTHO05D002107 1.7e-06 58.9 165 24.2
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 1.7e-06 58.9 168 25.0
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 1.7e-06 58.9 168 25.6
SEGI_16813 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 1.7e-06 58.9 151 23.8
Lj2A685T11 Lonicera japonica HOM05D005862 ORTHO05D007731 2.8e-06 58.2 229 24.9
Solyc01g006850.1 Solanum lycopersicum HOM05D006596 ORTHO05D008497 2.8e-06 58.2 114 28.9
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 3.7e-06 57.8 167 25.1
SEGI_11609 Sequoiadendron giganteum HOM05D008234 ORTHO05D010422 3.7e-06 57.8 191 23.0
Phvul.007G135000 Phaseolus vulgaris HOM05D002479 ORTHO05D002675 4.8e-06 57.4 93 30.1
Sopen01g002840 Solanum pennellii HOM05D006596 ORTHO05D008497 4.8e-06 57.4 114 28.1
A02p36520 Brassica napus HOM05D007093 ORTHO05D008910 6.3e-06 57.0 112 29.5
BraA02t08648Z Brassica rapa HOM05D007093 ORTHO05D008910 6.3e-06 57.0 112 29.5
ClCG09G009830 Citrullus lanatus HOM05D000001 ORTHO05D000003 6.3e-06 57.0 209 24.4
Thhalv10002816m.g Eutrema salsugineum HOM05D000001 ORTHO05D000003 6.3e-06 57.0 165 21.8
MD09G1262300 Malus domestica HOM05D002007 ORTHO05D000355 6.3e-06 57.0 195 22.1
PSO017G2101 Papaver somniferum HOM05D000001 ORTHO05D011132 6.3e-06 57.0 189 25.9
Atru.chr10.1354 Acer truncatum HOM05D007093 ORTHO05D008910 8.2e-06 56.6 42 57.1
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 8.2e-06 56.6 168 24.4
Cfa015785 Carpinus fangiana HOM05D007128 ORTHO05D009059 8.2e-06 56.6 110 31.8
Haze_00709 Corylus avellana HOM05D007128 ORTHO05D009059 8.2e-06 56.6 110 31.8
HanXRQChr16g0502661 Helianthus annuus HOM05D007128 ORTHO05D009059 8.2e-06 56.6 119 34.5
Lj3P904T49 Lonicera japonica HOM05D006156 ORTHO05D007699 8.2e-06 56.6 185 24.9
Lj1g0002494 Lotus japonicus HOM05D003056 ORTHO05D003422 8.2e-06 56.6 163 23.9
Medtr1g113010 Medicago truncatula HOM05D006156 ORTHO05D007699 8.2e-06 56.6 234 22.6
SMO364G0905 Selaginella moellendorffii HOM05D031156 ORTHO05D000355 8.2e-06 56.6 141 24.1
TAR560G0001 Trochodendron aralioides HOM05D000001 ORTHO05D013582 8.2e-06 56.6 436 16.7


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