Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G023200 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 4.6e-42 174.1 85 100.0
Phvul.008G024900 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 1.8e-38 162.2 85 91.8
VMungo1383G3363 Vigna mungo HOM05D015479 ORTHO05D011556 3.5e-26 121.3 75 76.0
Phvul.008G023100 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 1.8e-25 119.0 85 65.9
Phvul.008G023300 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 8.7e-25 116.7 83 68.7
Glyma.08G254850 Glycine max HOM05D015479 ORTHO05D011556 3.3e-24 114.8 81 69.1
Glyma.18G277700 Glycine max HOM05D015479 ORTHO05D011556 9.6e-24 113.2 82 68.3
Glyma.11G033700 Glycine max HOM05D015479 ORTHO05D011556 9.0e-22 106.7 81 63.0
Potri.009G162300 Populus trichocarpa HOM05D012769 ORTHO05D011556 1.0e-09 66.6 72 48.6
Gohir.D10G135600 Gossypium hirsutum HOM05D011381 ORTHO05D011556 8.8e-09 63.5 64 46.9
Carub.0007s2598 Capsella rubella HOM05D010807 ORTHO05D010698 1.9e-08 62.4 80 40.0
Gorai.011G150400 Gossypium raimondii HOM05D011381 ORTHO05D011556 3.3e-08 61.6 59 47.5
Medtr7g417710 Medicago truncatula HOM05D018881 ORTHO05D015713 7.4e-08 60.5 83 41.0
Medtr7g417780 Medicago truncatula HOM05D018881 ORTHO05D015713 7.4e-08 60.5 83 41.0
Peaxi162Scf00078g00744 Petunia axillaris HOM05D013488 ORTHO05D015723 9.7e-08 60.1 76 43.4
arahy.Tifrunner.gnm1.ann1.N2UHCK Arachis hypogaea HOM05D015479 ORTHO05D011556 1.3e-07 59.7 80 33.8
Peaxi162Scf00078g00746 Petunia axillaris HOM05D013488 ORTHO05D015723 1.3e-07 59.7 76 43.4
Sabra06G0146500 Salix brachista HOM05D012769 ORTHO05D010698 2.2e-07 58.9 69 40.6
Thecc.09G269400 Theobroma cacao HOM05D011381 ORTHO05D011556 2.8e-07 58.5 80 38.8
AT4G15733 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 6.3e-07 57.4 77 39.0
Gohir.A10G131100 Gossypium hirsutum HOM05D011381 ORTHO05D011556 1.4e-06 56.2 71 39.4
AL7G39660 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 2.4e-06 55.5 77 37.7
Medtr6g025710 Medicago truncatula HOM05D024616 ORTHO05D015713 3.1e-06 55.1 82 37.8
Gohir.A07G114000 Gossypium hirsutum HOM05D011381 ORTHO05D011556 5.3e-06 54.3 80 38.8
Gohir.D07G117700 Gossypium hirsutum HOM05D011381 ORTHO05D011556 5.3e-06 54.3 77 37.7
Gorai.001G126600 Gossypium raimondii HOM05D011381 ORTHO05D011556 6.9e-06 53.9 77 37.7
Manes.09G034600 Manihot esculenta HOM05D012769 ORTHO05D010698 9.1e-06 53.5 74 31.1


User provided reference genes

Program Settings