Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 7.0e-209 730.3 357 100.0
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 6.8e-188 660.6 358 91.6
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 1.0e-183 646.7 359 89.7
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 2.8e-181 638.6 361 88.1
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 2.8e-181 638.6 361 88.1
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 1.7e-170 602.8 362 84.0
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 3.5e-168 595.1 376 81.9
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 3.5e-168 595.1 376 81.9
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 1.1e-166 590.1 366 82.0
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 4.3e-166 588.2 370 80.8
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 2.0e-163 579.3 358 80.4
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 1.1e-158 563.5 347 82.1
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 2.2e-154 549.3 358 77.4
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 3.8e-154 548.5 358 77.4
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 8.4e-154 547.4 332 83.1
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 1.9e-153 546.2 364 75.5
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 7.1e-153 544.3 357 76.5
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.6e-152 543.1 363 76.0
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 2.1e-152 542.7 364 75.8
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 7.9e-152 540.8 358 77.4
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 1.7e-151 539.7 357 76.5
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.0e-151 538.9 359 74.9
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 8.7e-151 537.3 357 75.9
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 1.1e-150 537.0 367 76.3
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 1.6e-149 533.1 357 75.1
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 1.6e-149 533.1 363 74.4
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.6e-149 533.1 363 74.4
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.8e-149 532.3 356 74.7
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 6.2e-149 531.2 357 74.8
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.1e-148 530.4 366 74.0
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 2.4e-148 529.3 363 75.8
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.4e-148 529.3 364 73.6
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.4e-148 529.3 359 74.7
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 3.1e-148 528.9 356 74.4
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 4.0e-148 528.5 356 74.7
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 5.3e-148 528.1 362 75.7
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 2.0e-147 526.2 360 74.4
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 7.6e-147 524.2 364 75.3
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 3.8e-146 521.9 369 72.4
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 3.2e-145 518.8 365 74.2
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 5.5e-145 518.1 358 74.6
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 5.5e-145 518.1 360 73.1
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 5.5e-145 518.1 357 73.1
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 9.3e-145 517.3 367 71.9
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 1.6e-144 516.5 359 73.8
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.1e-144 516.2 361 75.6
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.0e-143 513.8 359 72.7
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 1.0e-143 513.8 360 72.5
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 5.1e-143 511.5 364 70.6
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 4.3e-142 508.4 365 71.8
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 5.6e-142 508.1 362 71.3
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 5.6e-142 508.1 362 74.6
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.6e-141 506.5 366 71.0
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 3.7e-141 505.4 364 73.1
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 4.0e-140 501.9 360 70.0
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 9.0e-140 500.7 365 71.5
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 9.0e-140 500.7 358 72.1
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 1.2e-139 500.4 360 69.7
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 1.5e-139 500.0 363 70.2
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 2.6e-139 499.2 369 68.0
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 5.8e-139 498.0 369 68.0
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 5.8e-139 498.0 361 70.4
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 5.8e-139 498.0 357 72.0
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 7.6e-139 497.7 369 67.8
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 7.6e-139 497.7 369 67.8
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 7.6e-139 497.7 371 68.2
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 1.0e-138 497.3 362 69.3
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 1.7e-138 496.5 368 68.8
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 2.2e-138 496.1 369 68.3
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 2.9e-138 495.7 368 68.5
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 2.9e-138 495.7 370 68.4
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 4.9e-138 495.0 441 63.0
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 8.4e-138 494.2 362 70.2
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 8.4e-138 494.2 362 70.2
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 1.1e-137 493.8 357 68.9
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 3.2e-137 492.3 371 68.2
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 3.2e-137 492.3 364 67.9
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 3.2e-137 492.3 361 69.3
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 4.2e-137 491.9 362 69.9
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.1e-137 491.1 333 74.5
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 1.2e-136 490.3 369 67.8
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 1.0e-135 487.3 357 70.3
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 1.3e-135 486.9 360 68.6
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 3.0e-135 485.7 354 70.6
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 3.0e-135 485.7 357 69.5
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 3.0e-135 485.7 376 67.0
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 7.4e-134 481.1 360 68.1
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.6e-133 479.9 368 67.7
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 2.1e-133 479.6 354 70.6
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 3.7e-133 478.8 333 74.8
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 5.5e-129 464.9 360 67.5
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 1.6e-128 463.4 370 64.3
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 1.6e-128 463.4 333 72.4
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 3.6e-128 462.2 357 67.5
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 6.1e-128 461.5 362 65.5
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 3.0e-127 459.1 364 64.6
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 2.8e-125 452.6 374 64.7
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 3.7e-125 452.2 332 72.3
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 8.2e-125 451.1 377 64.5
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.1e-124 450.7 357 64.7
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.2e-120 437.2 357 62.7
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.4e-119 433.7 369 61.2
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 8.8e-119 431.0 337 68.5
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.8e-117 426.0 357 62.7
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 2.6e-115 419.5 366 59.3
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 6.5e-114 414.8 293 74.4
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.1e-113 414.1 291 74.6
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 3.2e-113 412.5 357 59.4
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 4.2e-113 412.1 289 76.1
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 1.6e-107 393.7 327 63.6
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 4.5e-107 392.1 360 56.9
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.9e-105 386.7 307 62.5
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.4e-103 380.6 305 62.0
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 2.3e-103 379.8 194 92.8
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.2e-101 373.2 233 78.1
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.8e-101 372.9 357 57.1
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 5.3e-100 368.6 364 55.8
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 1.7e-98 363.6 194 87.6
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.7e-96 356.3 361 53.2
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 2.7e-96 356.3 356 53.1
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 3.6e-96 355.9 305 58.4
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 6.1e-96 355.1 309 59.2
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.0e-95 354.4 194 86.1
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 2.0e-94 350.1 304 60.9
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 3.6e-88 329.3 305 53.1
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 1.3e-69 267.7 153 82.4
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 4.3e-65 252.7 227 62.1
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 4.7e-64 249.2 210 62.4
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.2e-60 236.5 126 86.5
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 1.4e-47 194.5 214 50.9
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 3.1e-47 193.4 100 90.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.7e-43 180.3 91 89.0
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 6.0e-43 179.1 190 54.2
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 4.2e-36 156.4 146 61.6
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 6.7e-34 149.1 88 81.8
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 2.1e-32 144.1 101 73.3
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 3.7e-32 143.3 161 52.2
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 2.1e-27 127.5 73 76.7
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 3.5e-27 126.7 73 76.7
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.9e-27 125.6 165 45.5
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 6.9e-15 85.9 43 90.7
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 7.2e-12 75.9 134 37.3
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 1.5e-06 58.2 71 53.5


User provided reference genes

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