Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G013666 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 0.0e+00 1204.5 623 100.0
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 1.2e-280 969.5 615 85.0
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 5.8e-259 897.5 617 79.1
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 1.4e-196 690.3 624 65.2
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 2.5e-177 626.3 606 61.4
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.2e-166 590.9 610 59.2
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 1.0e-162 577.8 577 59.8
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 1.0e-162 577.8 577 59.8
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 1.0e-159 567.8 628 57.3
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 2.1e-99 367.5 638 42.2
Lalb_Chr04g0257831 Lupinus albus HOM05D006083 ORTHO05D007634 2.5e-97 360.5 430 53.7
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 4.3e-97 359.8 668 40.7
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 5.3e-95 352.8 615 41.8
Lalb_Chr10g0091761 Lupinus albus HOM05D006083 ORTHO05D007634 1.2e-94 351.7 427 52.7
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 2.6e-94 350.5 693 39.4
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 5.3e-87 326.2 689 39.0
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 3.2e-84 317.0 697 38.2
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 1.8e-82 311.2 239 69.5
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 2.0e-81 307.8 675 39.0
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 1.7e-80 304.7 674 38.7
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 3.7e-80 303.5 679 38.7
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 1.4e-79 301.6 675 39.3
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 3.1e-79 300.4 679 38.4
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 1.2e-78 298.5 717 36.7
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 1.4e-74 285.0 613 38.5
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 7.4e-73 279.3 684 37.3
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 7.4e-73 279.3 583 39.5
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 2.2e-72 277.7 698 36.2
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.8e-72 277.3 680 36.2
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 1.8e-71 274.6 697 35.9
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 1.8e-71 274.6 675 36.0
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.8e-71 274.6 680 36.0
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.4e-71 274.2 681 37.0
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 3.5e-70 270.4 697 35.4
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 1.7e-69 268.1 493 40.4
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 2.2e-69 267.7 680 35.7
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 6.5e-69 266.2 695 36.7
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 6.5e-69 266.2 672 35.7
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 1.2e-67 261.9 675 37.5
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 2.6e-65 254.2 170 77.6
TPR.G40211 Trifolium pratense HOM05D006083 ORTHO05D007634 7.5e-65 252.7 360 48.3
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 1.4e-63 248.4 688 35.0
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 7.0e-63 246.1 169 76.3
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 2.0e-62 244.6 680 33.4
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 1.6e-59 235.0 640 35.2
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 4.7e-59 233.4 715 33.4
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 9.8e-57 225.7 676 34.6
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 1.2e-54 218.8 650 34.9
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 1.7e-53 214.9 648 34.4
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 6.5e-53 213.0 755 30.5
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 4.2e-52 210.3 675 33.2
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 2.1e-51 208.0 668 31.1
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 3.6e-51 207.2 559 35.2
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 1.8e-50 204.9 652 34.2
TAR369G0795 Trochodendron aralioides HOM05D006083 ORTHO05D007634 8.8e-50 202.6 693 31.2
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 2.2e-48 198.0 640 34.7
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 2.2e-48 198.0 710 31.7
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 3.7e-48 197.2 711 30.9
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 7.0e-47 193.0 676 31.8
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 3.5e-46 190.7 667 32.1
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 7.3e-44 183.0 655 30.5
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 6.1e-43 179.9 615 31.7
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 1.5e-41 175.3 632 31.5
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 4.4e-41 173.7 320 40.0
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 7.5e-41 172.9 606 32.8
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 9.8e-41 172.6 612 31.5
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 1.3e-40 172.2 533 33.8
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 2.9e-40 171.0 616 32.5
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 3.7e-40 170.6 652 29.1
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 2.4e-39 167.9 627 31.9
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 3.2e-39 167.5 519 33.1
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 5.4e-39 166.8 711 31.2
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 9.2e-39 166.0 608 31.9
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 1.2e-38 165.6 724 28.3
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 2.7e-38 164.5 643 31.3
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 3.5e-38 164.1 669 31.2
BcaB06g29099 Brassica carinata HOM05D006083 ORTHO05D007634 1.3e-37 162.2 613 33.0
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 5.0e-37 160.2 665 30.5
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 1.2e-35 155.6 618 30.3
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 1.2e-35 155.6 671 29.7
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 1.2e-35 155.6 528 31.2
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 5.2e-34 150.2 624 29.2
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 5.2e-34 150.2 549 31.0
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 1.2e-33 149.1 672 28.9
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 1.3e-32 145.6 674 29.1
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 2.2e-32 144.8 524 31.5
Cpa.g.sc1.375 Carica papaya HOM05D006083 ORTHO05D007634 8.3e-32 142.9 213 43.7
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 4.1e-31 140.6 180 51.1
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 7.0e-31 139.8 693 28.7
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 2.8e-27 127.9 543 28.9
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 4.7e-27 127.1 661 27.5
Hund24433 Selenicereus undatus HOM05D006083 ORTHO05D007634 1.4e-26 125.6 638 29.3
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 1.5e-25 122.1 235 37.0
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 3.4e-25 120.9 674 28.5
RcHm_v2.0_Chr3g0492191 Rosa chinensis HOM05D006083 ORTHO05D007634 4.6e-22 110.5 208 43.8
Cpa.g.sc1.376 Carica papaya HOM05D006083 ORTHO05D007634 2.5e-20 104.8 420 29.3
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 2.8e-19 101.3 107 49.5
HPP92_018997 Vanilla planifolia HOM05D006083 ORTHO05D007634 9.9e-17 92.8 458 28.8
Sc06g0002670 Simmondsia chinensis HOM05D006083 ORTHO05D007634 3.2e-15 87.8 435 27.8
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 2.1e-14 85.1 438 27.6
Lsat_1_v5_gn_7_4020 Lactuca sativa HOM05D006083 ORTHO05D007634 1.3e-13 82.4 66 63.6
Oeu023787.1 Olea europaea HOM05D006083 ORTHO05D007634 3.6e-11 74.3 321 31.8
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 4.0e-10 70.9 582 25.6
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 4.9e-08 63.9 637 25.4
SEGI_22945 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 6.4e-08 63.5 72 44.4
Mapoly0075s0039 Marchantia polymorpha HOM05D006083 ORTHO05D007634 1.9e-07 62.0 64 48.4
SMO367G1201 Selaginella moellendorffii HOM05D006083 ORTHO05D007634 4.2e-07 60.8 57 56.1
AagrBONN_evm.TU.Sc2ySwM_228.2795 Anthoceros agrestis HOM05D000140 ORTHO05D007634 3.5e-06 57.8 59 45.8


User provided reference genes

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