Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G010400 Phaseolus vulgaris HOM05D009017 ORTHO05D010462 7.0e-54 213.8 113 100.0
VMungo1383G3025 Vigna mungo HOM05D009017 ORTHO05D010462 4.0e-41 171.4 114 75.4
Hma1.2p1_0953F.1_g241070 Hydrangea macrophylla HOM05D009017 ORTHO05D010462 7.5e-16 87.4 95 45.3
Actinidia32413 Actinidia chinensis HOM05D009017 ORTHO05D010462 1.7e-15 86.3 76 48.7
Duzib114G0060 Durio zibethinus HOM05D009017 ORTHO05D010462 2.2e-15 85.9 92 47.8
Lj2g0020276 Lotus japonicus HOM05D009017 ORTHO05D010462 3.7e-15 85.1 85 51.8
Thecc.10G042200 Theobroma cacao HOM05D009017 ORTHO05D010462 3.7e-15 85.1 78 51.3
Lalb_Chr10g0091611 Lupinus albus HOM05D009017 ORTHO05D010462 6.4e-15 84.3 99 46.5
Psat1g090800 Pisum sativum HOM05D009017 ORTHO05D010462 1.9e-14 82.8 90 47.8
Phvul.004G001100 Phaseolus vulgaris HOM05D009017 ORTHO05D010462 4.1e-14 81.6 90 47.8
VMungo0464G0182 Vigna mungo HOM05D009017 ORTHO05D010462 9.2e-14 80.5 87 49.4
Thecc.10G041700 Theobroma cacao HOM05D009017 ORTHO05D010462 3.0e-12 75.5 78 47.4
Thecc.10G041900 Theobroma cacao HOM05D009017 ORTHO05D010462 3.0e-12 75.5 83 45.8
Atru.chr12.449 Acer truncatum HOM05D010334 ORTHO05D010462 3.3e-11 72.0 79 38.0
Gohir.D10G228766 Gossypium hirsutum HOM05D009017 ORTHO05D010462 4.3e-11 71.6 90 44.4
Gohir.A10G219300 Gossypium hirsutum HOM05D009017 ORTHO05D010462 9.5e-11 70.5 79 43.0
Gohir.D10G228733 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.2e-10 70.1 90 42.2
Medtr6g027970 Medicago truncatula HOM05D009017 ORTHO05D010462 1.2e-10 70.1 67 46.3
Gohir.A10G219350 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.6e-10 69.7 79 43.0
Cpa.g.sc1118.2 Carica papaya HOM05D009017 ORTHO05D010462 2.1e-10 69.3 83 39.8
Cpa.g.sc1.225 Carica papaya HOM05D009017 ORTHO05D010462 2.8e-10 68.9 71 46.5
Gohir.A06G170533 Gossypium hirsutum HOM05D009017 ORTHO05D010462 2.8e-10 68.9 76 48.7
COL.COLO4_15045 Corchorus olitorius HOM05D009017 ORTHO05D010462 4.7e-10 68.2 81 37.0
Gohir.A06G176800 Gossypium hirsutum HOM05D009017 ORTHO05D010462 4.7e-10 68.2 98 43.9
Gorai.010G201900 Gossypium raimondii HOM05D009017 ORTHO05D010462 8.1e-10 67.4 92 45.7
Gohir.D06G172800 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.4e-09 66.6 92 45.7
Gohir.D06G172750 Gossypium hirsutum HOM05D009017 ORTHO05D010462 3.1e-09 65.5 94 42.6
Gorai.010G201800 Gossypium raimondii HOM05D009017 ORTHO05D010462 3.1e-09 65.5 94 42.6
Gorai.011G262600 Gossypium raimondii HOM05D009017 ORTHO05D010462 3.1e-09 65.5 77 45.5
Gohir.D10G230025 Gossypium hirsutum HOM05D009017 ORTHO05D010462 4.0e-09 65.1 77 44.2
Gohir.A05G298250 Gossypium hirsutum HOM05D009017 ORTHO05D010462 2.0e-08 62.8 77 40.3
Thhalv10015565m.g Eutrema salsugineum HOM05D010334 ORTHO05D010462 1.3e-07 60.1 52 53.8
Gohir.D06G172775 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.3e-07 60.1 94 40.4
Sabra10G0157300 Salix brachista HOM05D009017 ORTHO05D010462 2.2e-07 59.3 53 47.2
Cpa.g.c29560 Carica papaya HOM05D031039 ORTHO05D117232 3.7e-07 58.5 79 34.2
BcaC04g24250 Brassica carinata HOM05D010334 ORTHO05D010462 1.1e-06 57.0 85 36.5
BcaC04g19076 Brassica carinata HOM05D010334 ORTHO05D010462 1.9e-06 56.2 74 39.2
BolC9t59163H Brassica oleracea HOM05D010334 ORTHO05D010462 1.9e-06 56.2 74 39.2
C02p06460 Brassica napus HOM05D010334 ORTHO05D010462 2.4e-06 55.8 54 48.1
BolC2t06592H Brassica oleracea HOM05D010334 ORTHO05D010462 2.4e-06 55.8 54 48.1
AL6G24450 Arabidopsis lyrata HOM05D010334 ORTHO05D010462 3.2e-06 55.5 67 41.8
Carub.0006s1201 Capsella rubella HOM05D010334 ORTHO05D010462 3.2e-06 55.5 78 37.2
BcaNung04180 Brassica carinata HOM05D010334 ORTHO05D010462 4.1e-06 55.1 54 46.3
A02p02220 Brassica napus HOM05D010334 ORTHO05D010462 4.1e-06 55.1 48 54.2
BraA02t05194Z Brassica rapa HOM05D010334 ORTHO05D010462 4.1e-06 55.1 48 54.2
FvH4_7g22495 Fragaria vesca HOM05D045852 ORTHO05D010462 4.1e-06 55.1 52 46.2
C09p63270 Brassica napus HOM05D010334 ORTHO05D010462 7.1e-06 54.3 84 35.7
A10p24530 Brassica napus HOM05D010334 ORTHO05D010462 9.2e-06 53.9 84 36.9
BraA10t44517Z Brassica rapa HOM05D010334 ORTHO05D010462 9.2e-06 53.9 84 36.9
PGR142G1311 Punica granatum HOM05D009017 ORTHO05D010462 9.2e-06 53.9 45 48.9


User provided reference genes

Program Settings