Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G008700 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 4.1e-69 264.6 134 100.0
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 8.3e-54 213.8 136 81.6
Glyma.18G293600 Glycine max HOM05D004062 ORTHO05D004417 1.5e-42 176.4 136 66.9
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 3.6e-41 171.8 135 66.7
Lj1g0013725 Lotus japonicus HOM05D004062 ORTHO05D004417 2.0e-31 139.4 137 54.7
Ca_08095_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 1.6e-28 129.8 129 59.7
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 3.5e-28 128.6 135 54.8
Lalb_Chr17g0335981 Lupinus albus HOM05D004062 ORTHO05D004417 6.0e-28 127.9 137 54.7
Medtr7g082730 Medicago truncatula HOM05D004062 ORTHO05D004417 1.7e-27 126.3 127 56.7
Glyma.02G089500 Glycine max HOM05D004062 ORTHO05D004417 3.9e-27 125.2 140 52.9
Medtr7g082740 Medicago truncatula HOM05D004062 ORTHO05D004417 5.0e-27 124.8 129 55.8
Medtr7g082700 Medicago truncatula HOM05D004062 ORTHO05D004417 6.6e-27 124.4 129 54.3
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea HOM05D004062 ORTHO05D004417 1.9e-26 122.9 132 53.0
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea HOM05D004062 ORTHO05D004417 1.9e-26 122.9 132 53.0
Lalb_Chr04g0257671 Lupinus albus HOM05D004062 ORTHO05D004417 1.9e-26 122.9 132 52.3
VMungo1383G2158 Vigna mungo HOM05D004062 ORTHO05D004417 7.3e-26 120.9 137 52.6
Ca_08096_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 4.7e-25 118.2 129 55.0
Psat3g097360 Pisum sativum HOM05D004062 ORTHO05D004417 4.7e-25 118.2 128 52.3
Glyma.18G293500 Glycine max HOM05D004062 ORTHO05D004417 2.3e-24 115.9 138 51.4
Phvul.008G008800 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 3.1e-24 115.5 135 52.6
Lj1g0017758 Lotus japonicus HOM05D004062 ORTHO05D004417 8.9e-24 114.0 146 49.3
TPR.G16541 Trifolium pratense HOM05D004062 ORTHO05D004417 5.4e-21 104.8 136 51.5
TPR.G16550 Trifolium pratense HOM05D004062 ORTHO05D004417 5.4e-21 104.8 129 52.7
arahy.Tifrunner.gnm1.ann1.95RUG0 Arachis hypogaea HOM05D004062 ORTHO05D004417 1.2e-20 103.6 137 48.2
arahy.Tifrunner.gnm1.ann1.EB5M6E Arachis hypogaea HOM05D004062 ORTHO05D004417 1.2e-20 103.6 137 48.2
TPR.G16561 Trifolium pratense HOM05D004062 ORTHO05D004417 1.2e-20 103.6 130 50.8
Psat3g097320 Pisum sativum HOM05D004062 ORTHO05D004417 1.6e-20 103.2 122 51.6
Medtr7g082760 Medicago truncatula HOM05D004062 ORTHO05D004417 6.0e-20 101.3 134 49.3
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 1.0e-19 100.5 133 41.4
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.7e-19 99.8 126 45.2
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 6.6e-19 97.8 130 42.3
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.5e-18 96.7 133 44.4
Medtr7g082750 Medicago truncatula HOM05D004062 ORTHO05D004417 1.9e-18 96.3 138 45.7
Psat3g097280 Pisum sativum HOM05D004062 ORTHO05D004417 1.9e-18 96.3 137 45.3
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 5.6e-18 94.7 137 41.6
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 1.6e-17 93.2 125 38.4
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 2.1e-17 92.8 140 42.1
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 2.8e-17 92.4 121 43.8
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 2.8e-17 92.4 123 43.9
Psat3g097240 Pisum sativum HOM05D004062 ORTHO05D004417 2.8e-17 92.4 136 47.1
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 6.2e-17 91.3 122 44.3
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 8.1e-17 90.9 136 39.7
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 1.1e-16 90.5 132 40.9
Ca_08097_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 1.4e-16 90.1 136 46.3
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 2.3e-16 89.4 127 38.6
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 6.8e-16 87.8 122 42.6
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.2e-15 87.0 136 38.2
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.0e-15 86.3 124 39.5
CANSAT78G1768 Cannabis sativa HOM05D004062 ORTHO05D004417 5.8e-15 84.7 131 41.2
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 5.8e-15 84.7 118 41.5
MBI16_g14297_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 9.9e-15 84.0 134 40.3
Eucgr.F02795 Eucalyptus grandis HOM05D004062 ORTHO05D004417 1.3e-14 83.6 139 36.0
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 1.3e-14 83.6 134 36.6
Manes.02G072000 Manihot esculenta HOM05D004062 ORTHO05D004417 1.3e-14 83.6 120 41.7
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.2e-14 82.8 131 41.2
TPR.G11392 Trifolium pratense HOM05D004062 ORTHO05D004417 2.9e-14 82.4 125 44.0
Sabra17G0098800 Salix brachista HOM05D004062 ORTHO05D004417 6.4e-14 81.3 135 37.8
Migut.H00242 Erythranthe guttata HOM05D004062 ORTHO05D004417 8.4e-14 80.9 125 38.4
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 1.1e-13 80.5 121 38.0
MSTRG.23597 Avicennia marina HOM05D004062 ORTHO05D004417 1.4e-13 80.1 124 41.1
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 2.4e-13 79.3 127 42.5
MBI16_g14296_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.4e-13 79.3 123 40.7
CiPaw.05G243300 Carya illinoinensis HOM05D004062 ORTHO05D004417 4.1e-13 78.6 136 36.8
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 5.4e-13 78.2 129 39.5
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 5.4e-13 78.2 127 40.2
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 5.4e-13 78.2 136 37.5
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 5.4e-13 78.2 136 37.5
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 9.2e-13 77.4 121 38.8
SGA_v2.0_scaffold202G41473 Striga asiatica HOM05D004062 ORTHO05D004417 1.2e-12 77.0 117 43.6
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 3.5e-12 75.5 130 36.2
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 7.8e-12 74.3 134 35.8
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 1.0e-11 73.9 126 40.5
SalBow5G1592 Salvia bowleyana HOM05D004062 ORTHO05D004417 1.0e-11 73.9 120 40.8
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 1.3e-11 73.6 134 35.8
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 3.0e-11 72.4 134 35.1
Oeu041981.1 Olea europaea HOM05D004062 ORTHO05D004417 3.9e-11 72.0 90 44.4
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 3.9e-11 72.0 121 38.8
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 3.9e-11 72.0 121 38.8
Ciclev10017837m.g Citrus clementina HOM05D004062 ORTHO05D004417 6.6e-11 71.2 135 34.8
SalBow3G0055 Salvia bowleyana HOM05D004062 ORTHO05D004417 6.6e-11 71.2 89 43.8
Lsat_1_v5_gn_3_82781 Lactuca sativa HOM05D004062 ORTHO05D004417 1.1e-10 70.5 133 34.6
Ciclev10013069m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.9e-10 69.7 126 34.1
Ciclev10018020m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.9e-10 69.7 137 35.0
Oeu012583.1 Olea europaea HOM05D004062 ORTHO05D004417 1.9e-10 69.7 119 42.0
Potri.010G119200 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.9e-10 69.7 129 31.8
MBI18_g04358_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.5e-10 69.3 124 40.3
Oeu030797.1 Olea europaea HOM05D004062 ORTHO05D004417 3.3e-10 68.9 88 43.2
Oeu030798.1 Olea europaea HOM05D004062 ORTHO05D004417 3.3e-10 68.9 88 43.2
Aqoxy3G03997 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 4.3e-10 68.6 126 37.3
Migut.L00492 Erythranthe guttata HOM05D004062 ORTHO05D004417 4.3e-10 68.6 134 35.8
Lj1g0018189 Lotus japonicus HOM05D004062 ORTHO05D004417 4.3e-10 68.6 138 37.7
DCAR_010711 Daucus carota HOM05D004062 ORTHO05D004417 1.2e-09 67.0 136 33.8
DCAR_010708 Daucus carota HOM05D004062 ORTHO05D004417 1.6e-09 66.6 106 40.6
DCAR_010707 Daucus carota HOM05D004062 ORTHO05D004417 2.8e-09 65.9 108 38.9
MBI10_g08537_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.4e-08 63.5 131 35.9
Oeu047438.1 Olea europaea HOM05D004062 ORTHO05D004417 1.4e-08 63.5 121 37.2
Cpa.g.sc314.3 Carica papaya HOM05D004062 ORTHO05D004417 2.4e-08 62.8 122 35.2
Sabra10G0089600 Salix brachista HOM05D004062 ORTHO05D004417 3.1e-08 62.4 123 30.9
Actinidia15903 Actinidia chinensis HOM05D002710 ORTHO05D002905 5.2e-08 61.6 128 35.2
Dinv16146 Davidia involucrata HOM05D004062 ORTHO05D004417 6.8e-08 61.2 124 33.1
DCAR_010713 Daucus carota HOM05D004062 ORTHO05D004417 8.9e-08 60.8 123 35.0
Eucgr.B02857 Eucalyptus grandis HOM05D004062 ORTHO05D004417 1.5e-07 60.1 90 40.0
Ciclev10018255m.g Citrus clementina HOM05D004062 ORTHO05D004417 2.0e-07 59.7 130 34.6
Rhsim10G0073300 Rhododendron simsii HOM05D004062 ORTHO05D004417 2.6e-07 59.3 137 30.7
RcHm_v2.0_Chr4g0434311 Rosa chinensis HOM05D004062 ORTHO05D004417 2.6e-07 59.3 137 32.1
Haze_00662 Corylus avellana HOM05D004062 ORTHO05D004417 3.4e-07 58.9 102 38.2
DCAR_010706 Daucus carota HOM05D004062 ORTHO05D004417 3.4e-07 58.9 137 33.6
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 4.4e-07 58.5 130 29.2
FAN22G1760 Fragaria x ananassa HOM05D004062 ORTHO05D004417 4.4e-07 58.5 140 32.9
FAN17G2092 Fragaria x ananassa HOM05D004062 ORTHO05D004417 9.9e-07 57.4 140 32.1
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 1.3e-06 57.0 130 29.2
DCAR_010710 Daucus carota HOM05D004062 ORTHO05D004417 1.3e-06 57.0 126 33.3
FAN07G0543 Fragaria x ananassa HOM05D004062 ORTHO05D004417 1.3e-06 57.0 140 32.1
FvH4_4g26630 Fragaria vesca HOM05D004062 ORTHO05D004417 1.7e-06 56.6 138 31.2
FAN12G0456 Fragaria x ananassa HOM05D004062 ORTHO05D004417 1.7e-06 56.6 138 31.2
FAN12G4350 Fragaria x ananassa HOM05D004062 ORTHO05D004417 1.7e-06 56.6 138 31.2
Atru.chr11.263 Acer truncatum HOM05D004062 ORTHO05D004417 2.2e-06 56.2 127 30.7
Atru.chr11.283 Acer truncatum HOM05D004062 ORTHO05D004417 2.2e-06 56.2 127 30.7
DCAR_010712 Daucus carota HOM05D004062 ORTHO05D004417 3.8e-06 55.5 121 38.8


User provided reference genes

Program Settings