Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 2.2e-193 678.7 332 100.0
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.3e-185 652.9 330 95.8
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.2e-173 613.2 332 89.2
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 4.0e-150 535.0 333 79.0
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 1.4e-147 526.6 339 76.4
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.3e-145 520.0 344 74.7
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.3e-145 520.0 344 74.7
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 5.6e-144 514.6 334 75.1
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 5.6e-144 514.6 338 75.7
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 2.5e-136 489.2 345 70.7
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.1e-135 486.1 323 74.0
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.2e-133 480.3 328 71.6
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.5e-133 479.9 324 72.8
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 5.8e-133 478.0 327 70.9
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.7e-132 476.5 330 70.3
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.2e-132 476.1 326 72.4
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 2.2e-132 476.1 325 71.1
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 2.9e-132 475.7 324 72.5
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 4.9e-132 474.9 327 71.3
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 8.4e-132 474.2 323 70.0
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 1.4e-131 473.4 321 73.5
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.9e-131 473.0 316 72.5
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.9e-131 473.0 337 68.8
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 3.2e-131 472.2 337 68.5
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.2e-130 470.3 337 68.2
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 2.1e-130 469.5 336 69.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 4.6e-130 468.4 310 72.3
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 1.8e-129 466.5 312 72.1
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.8e-129 466.5 315 71.4
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.8e-129 466.5 322 69.3
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 3.9e-129 465.3 335 68.7
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 3.9e-129 465.3 339 68.1
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.5e-128 463.4 318 69.8
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.9e-128 463.0 329 68.1
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 2.5e-128 462.6 327 67.3
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 3.3e-128 462.2 333 68.8
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 3.3e-128 462.2 326 68.4
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 2.1e-127 459.5 329 68.7
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.8e-127 459.1 325 69.8
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.1e-126 457.2 325 67.1
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 1.1e-126 457.2 318 67.6
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.8e-126 456.4 304 71.7
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.8e-126 456.4 316 70.6
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 1.5e-125 453.4 321 70.1
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 2.0e-125 453.0 334 67.1
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.6e-125 452.6 321 69.2
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 9.9e-125 450.7 326 66.9
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 8.4e-124 447.6 321 68.5
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.9e-123 446.4 322 67.4
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 3.2e-123 445.7 311 69.8
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 2.7e-122 442.6 309 68.3
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.8e-121 439.9 313 69.6
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 3.3e-120 435.6 318 67.0
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.1e-119 433.0 320 65.9
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.1e-119 433.0 309 68.3
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 2.8e-119 432.6 323 65.6
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 4.8e-119 431.8 324 65.1
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.1e-118 429.1 331 65.0
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.1e-118 429.1 331 65.0
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.1e-118 429.1 307 68.1
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 6.9e-118 427.9 304 65.8
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 2.6e-117 426.0 308 67.2
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 3.4e-117 425.6 333 64.3
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 7.6e-117 424.5 324 64.2
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.7e-116 423.3 311 65.6
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 3.8e-116 422.2 324 63.6
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.9e-115 419.9 311 65.0
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.9e-115 419.9 323 65.3
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 4.2e-115 418.7 316 64.9
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 4.2e-115 418.7 335 61.5
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 3.5e-114 415.6 335 60.9
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 1.1e-112 410.6 314 64.0
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 3.3e-112 409.1 319 66.5
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 9.7e-112 407.5 301 69.1
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 2.4e-110 402.9 342 61.1
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 9.0e-110 401.0 316 62.3
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.3e-108 397.1 288 67.7
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 5.0e-108 395.2 223 83.9
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.1e-107 394.0 282 67.7
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 2.5e-104 382.9 309 63.1
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 4.2e-99 365.5 260 71.2
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 4.7e-98 362.1 312 60.3
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.1e-94 350.9 302 59.6
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 5.0e-92 342.0 251 68.1
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 6.5e-92 341.7 338 53.3
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.1e-88 330.9 292 54.8
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 5.3e-86 322.0 248 63.7
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 8.5e-84 314.7 316 55.4
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 2.7e-82 309.7 296 53.0
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 8.8e-81 304.7 296 49.7
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.5e-77 292.7 320 48.4
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 1.7e-76 290.4 209 67.0
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.2e-73 278.9 323 48.3
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 1.7e-68 263.8 198 66.7
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.1e-67 261.2 193 64.8
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 5.5e-67 258.8 328 43.0
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 1.5e-64 250.8 188 64.4
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 4.4e-64 249.2 168 73.2
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 2.0e-61 240.4 350 39.1
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 9.8e-56 221.5 256 43.8
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 2.4e-54 216.9 198 55.1
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-49 201.1 206 52.9
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 6.8e-49 198.7 297 40.7
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.6e-42 177.6 103 84.5
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.8e-41 174.1 129 62.8
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 4.1e-38 162.9 89 84.3
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 9.5e-35 151.8 94 78.7
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 8.1e-34 148.7 124 60.5
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 2.2e-31 140.6 90 74.4
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.5e-29 133.3 116 56.0
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 3.9e-28 129.8 332 31.3
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 3.6e-26 123.2 94 59.6
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.5e-24 117.9 101 55.4
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 9.3e-22 108.6 285 28.4
Mapoly0069s0018 Marchantia polymorpha HOM05D000224 ORTHO05D001489 2.6e-08 63.9 100 34.0
Mapoly0025s0077 Marchantia polymorpha HOM05D000224 ORTHO05D001489 9.9e-08 62.0 86 37.2
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 1.3e-07 61.6 30 80.0
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 1.3e-07 61.6 133 31.6
TWI12G0975 Tripterygium wilfordii HOM05D000916 ORTHO05D007921 4.9e-07 59.7 247 27.5
MBI03_g28954_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D007921 3.2e-06 57.0 142 33.1
PSO017G2033 Papaver somniferum HOM05D000916 ORTHO05D007921 3.2e-06 57.0 147 28.6
PSO170G3269 Papaver somniferum HOM05D000916 ORTHO05D007921 3.2e-06 57.0 147 27.2


User provided reference genes

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