Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 3.5e-32 141.0 69 100.0
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 1.7e-26 122.1 69 87.0
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.4e-25 119.0 66 86.4
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 5.4e-25 117.1 69 84.1
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 9.2e-25 116.3 57 94.7
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 2.1e-24 115.2 60 90.0
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 3.5e-24 114.4 69 84.1
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 4.6e-24 114.0 57 93.0
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 4.6e-24 114.0 57 93.0
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 1.0e-23 112.8 66 81.8
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 1.0e-23 112.8 56 92.9
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 1.3e-23 112.5 56 92.9
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 1.3e-23 112.5 57 91.2
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 1.7e-23 112.1 63 85.7
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 1.7e-23 112.1 66 86.4
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 1.7e-23 112.1 66 86.4
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 2.3e-23 111.7 57 89.5
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 2.3e-23 111.7 57 89.5
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 2.3e-23 111.7 57 89.5
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 2.3e-23 111.7 57 89.5
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 2.3e-23 111.7 57 91.2
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 3.9e-23 110.9 58 89.7
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 3.9e-23 110.9 57 87.7
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 5.1e-23 110.5 55 92.7
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 5.1e-23 110.5 69 79.7
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 8.6e-23 109.8 55 92.7
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 8.6e-23 109.8 55 92.7
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 1.1e-22 109.4 65 80.0
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 1.1e-22 109.4 68 82.4
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 1.1e-22 109.4 65 83.1
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 1.5e-22 109.0 54 96.3
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 1.5e-22 109.0 55 89.1
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 1.5e-22 109.0 56 91.1
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 1.9e-22 108.6 65 78.5
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 1.9e-22 108.6 65 83.1
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.9e-22 108.6 57 87.7
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.9e-22 108.6 57 87.7
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.9e-22 108.6 57 87.7
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 1.9e-22 108.6 67 80.6
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 1.9e-22 108.6 55 90.9
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 2.5e-22 108.2 55 90.9
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 2.5e-22 108.2 56 89.3
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 2.5e-22 108.2 55 90.9
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 2.5e-22 108.2 55 90.9
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 2.5e-22 108.2 55 90.9
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 2.5e-22 108.2 66 80.3
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 3.3e-22 107.8 56 89.3
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 3.3e-22 107.8 55 90.9
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 4.3e-22 107.5 64 82.8
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 4.3e-22 107.5 61 82.0
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 4.3e-22 107.5 54 92.6
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 5.6e-22 107.1 63 81.0
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 7.3e-22 106.7 55 89.1
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 7.3e-22 106.7 65 83.1
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 7.3e-22 106.7 57 91.2
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 9.6e-22 106.3 65 76.9
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 9.6e-22 106.3 51 98.0
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.2e-21 105.9 53 94.3
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.2e-21 105.9 53 94.3
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 1.2e-21 105.9 54 90.7
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 2.1e-21 105.1 67 76.1
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 2.8e-21 104.8 55 90.9
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 3.6e-21 104.4 55 87.3
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 8.1e-21 103.2 54 88.9
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 8.1e-21 103.2 55 87.3
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 1.1e-20 102.8 65 73.8
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 1.4e-20 102.4 66 78.8
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 1.4e-20 102.4 52 92.3
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 1.4e-20 102.4 52 92.3
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 1.4e-20 102.4 66 78.8
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 1.4e-20 102.4 66 78.8
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 1.4e-20 102.4 52 92.3
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 1.4e-20 102.4 66 78.8
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 1.4e-20 102.4 66 77.3
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 1.4e-20 102.4 55 89.1
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 1.8e-20 102.1 66 78.8
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 2.4e-20 101.7 65 75.4
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 2.4e-20 101.7 54 88.9
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 2.4e-20 101.7 54 87.0
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 3.1e-20 101.3 65 73.8
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 3.1e-20 101.3 52 90.4
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 3.1e-20 101.3 52 90.4
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 3.1e-20 101.3 52 90.4
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 2.6e-19 98.2 65 75.4
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 9.9e-19 96.3 91 58.2
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 1.3e-18 95.9 64 75.0
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.7e-18 95.5 54 83.3
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 6.4e-18 93.6 47 93.6
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 8.4e-18 93.2 50 88.0
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 8.4e-18 93.2 56 73.2
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 1.1e-17 92.8 44 97.7
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.1e-17 92.8 66 66.7
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 1.1e-17 92.8 66 65.2
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 1.4e-17 92.4 55 87.3
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 2.4e-17 91.7 72 68.1
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 2.4e-17 91.7 54 75.9
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 5.4e-17 90.5 44 95.5
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 5.4e-17 90.5 55 81.8
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 9.3e-17 89.7 46 93.5
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 9.3e-17 89.7 87 56.3
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 2.1e-16 88.6 60 73.3
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 4.6e-16 87.4 44 90.9
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 4.6e-16 87.4 58 74.1
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.0e-15 86.3 54 77.8
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 1.3e-15 85.9 45 86.7
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 2.8e-13 78.2 42 85.7
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.1e-12 76.3 47 76.6
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 2.4e-12 75.1 37 94.6
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.1e-12 74.7 47 74.5
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 8.4e-10 66.6 46 67.4
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 1.4e-09 65.9 30 93.3
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.2e-08 62.8 34 82.4
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.2e-08 62.8 34 82.4
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 6.0e-08 60.5 61 59.0
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 9.6e-06 53.1 57 47.4
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 9.6e-06 53.1 56 53.6


User provided reference genes

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